RNA–Protein interactions for RNA: ENST00000488471.1

KIF3A-207, Transcript of kinesin family member 3A, humanhuman

TSL 2

Gene KIF3A, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-207ENST00000488471 AEBP2Q6ZN18 517 aaPredicted RBP23.62■■□□□ 1.37
KIF3A-207ENST00000488471 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
KIF3A-207ENST00000488471 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
KIF3A-207ENST00000488471 PHF23Q9BUL5 403 aaPredicted RBP19.88■□□□□ 0.77
KIF3A-207ENST00000488471 FOXD1Q16676 465 aa18.71■□□□□ 0.59
KIF3A-207ENST00000488471 PLPPR3Q6T4P5 718 aa18.13■□□□□ 0.49
KIF3A-207ENST00000488471 PPP6R1Q9UPN7 881 aa17.67■□□□□ 0.42
KIF3A-207ENST00000488471 ADRA2BP18089 450 aa17.59■□□□□ 0.41
KIF3A-207ENST00000488471 PIAS4Q8N2W9 510 aaPredicted RBP17.47■□□□□ 0.39
KIF3A-207ENST00000488471 MSH5O43196 834 aa17.39■□□□□ 0.37
KIF3A-207ENST00000488471 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
KIF3A-207ENST00000488471 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
KIF3A-207ENST00000488471 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
KIF3A-207ENST00000488471 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
KIF3A-207ENST00000488471 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
KIF3A-207ENST00000488471 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
KIF3A-207ENST00000488471 HOXD11P31277 338 aaPredicted RBP15.49■□□□□ 0.07
KIF3A-207ENST00000488471 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
KIF3A-207ENST00000488471 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
KIF3A-207ENST00000488471 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
KIF3A-207ENST00000488471 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
KIF3A-207ENST00000488471 KCNA4P22459 653 aa15.05■□□□□ -0
KIF3A-207ENST00000488471 DNAJC5BQ9UF47 199 aa14.95□□□□□ -0.02
KIF3A-207ENST00000488471 RNF39Q9H2S5 420 aa14.9□□□□□ -0.02
KIF3A-207ENST00000488471 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
KIF3A-207ENST00000488471 C1QBPQ07021 282 aaKnown RBP14.67□□□□□ -0.06
KIF3A-207ENST00000488471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
KIF3A-207ENST00000488471 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
KIF3A-207ENST00000488471 U3KPZ7 1027 aaPredicted RBP14.45□□□□□ -0.1
KIF3A-207ENST00000488471 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
KIF3A-207ENST00000488471 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
KIF3A-207ENST00000488471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
KIF3A-207ENST00000488471 CAPN15O75808 1086 aa14.06□□□□□ -0.16
KIF3A-207ENST00000488471 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
KIF3A-207ENST00000488471 DSG3P32926 999 aa14.02□□□□□ -0.17
KIF3A-207ENST00000488471 MYCNP04198 464 aaPredicted RBP14□□□□□ -0.17
KIF3A-207ENST00000488471 APLP2Q06481 763 aa14□□□□□ -0.17
KIF3A-207ENST00000488471 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
KIF3A-207ENST00000488471 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
KIF3A-207ENST00000488471 ZNF219Q9P2Y4 722 aaPredicted RBP13.9□□□□□ -0.18
KIF3A-207ENST00000488471 ZBTB22O15209 634 aa13.88□□□□□ -0.19
KIF3A-207ENST00000488471 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
KIF3A-207ENST00000488471 ABCB7O75027 752 aa13.76□□□□□ -0.21
KIF3A-207ENST00000488471 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
KIF3A-207ENST00000488471 POLA2Q14181 598 aa13.6□□□□□ -0.23
KIF3A-207ENST00000488471 ATXN8OSP0DMR3 200 aa13.56□□□□□ -0.24
KIF3A-207ENST00000488471 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
KIF3A-207ENST00000488471 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
KIF3A-207ENST00000488471 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
KIF3A-207ENST00000488471 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
KIF3A-207ENST00000488471 POTEHQ6S545 545 aa13.23□□□□□ -0.29
KIF3A-207ENST00000488471 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
KIF3A-207ENST00000488471 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
KIF3A-207ENST00000488471 AKT1S1Q96B36 256 aa13.09□□□□□ -0.31
KIF3A-207ENST00000488471 FBLN2P98095 1184 aa13.07□□□□□ -0.32
KIF3A-207ENST00000488471 SPDYE2BA6NHP3 402 aa12.96□□□□□ -0.33
KIF3A-207ENST00000488471 SPDYE6P0CI01 402 aa12.96□□□□□ -0.33
KIF3A-207ENST00000488471 SPDYE2Q495Y8 402 aa12.96□□□□□ -0.33
KIF3A-207ENST00000488471 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
KIF3A-207ENST00000488471 REM2Q8IYK8 340 aaPredicted RBP12.96□□□□□ -0.33
KIF3A-207ENST00000488471 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
KIF3A-207ENST00000488471 PITPNM1O00562 1244 aa12.82□□□□□ -0.36
KIF3A-207ENST00000488471 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
KIF3A-207ENST00000488471 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
KIF3A-207ENST00000488471 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
KIF3A-207ENST00000488471 SPDYE1Q8NFV5 336 aaPredicted RBP12.66□□□□□ -0.38
KIF3A-207ENST00000488471 PABPN1Q86U42 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
KIF3A-207ENST00000488471 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
KIF3A-207ENST00000488471 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
KIF3A-207ENST00000488471 PRKAR2AP13861 404 aaKnown RBP12.46□□□□□ -0.41
KIF3A-207ENST00000488471 PRR29P0C7W0 189 aa12.43□□□□□ -0.42
KIF3A-207ENST00000488471 HAX1O00165 279 aa12.37□□□□□ -0.43
KIF3A-207ENST00000488471 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
KIF3A-207ENST00000488471 PROM2Q8N271 834 aa12.35□□□□□ -0.43
KIF3A-207ENST00000488471 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
KIF3A-207ENST00000488471 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
KIF3A-207ENST00000488471 EVX2Q03828 476 aa12.31□□□□□ -0.44
KIF3A-207ENST00000488471 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
KIF3A-207ENST00000488471 CREBZFQ9NS37 354 aa12.23□□□□□ -0.45
KIF3A-207ENST00000488471 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
KIF3A-207ENST00000488471 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
KIF3A-207ENST00000488471 FKBP8Q14318 412 aa12.09□□□□□ -0.47
KIF3A-207ENST00000488471 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
KIF3A-207ENST00000488471 GABBR2O75899 941 aa12.02□□□□□ -0.49
KIF3A-207ENST00000488471 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.49
KIF3A-207ENST00000488471 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
KIF3A-207ENST00000488471 CLCN6P51797 869 aa11.92□□□□□ -0.5
KIF3A-207ENST00000488471 ZRANB1Q9UGI0 708 aa11.92□□□□□ -0.5
KIF3A-207ENST00000488471 MIER1Q8N108 512 aa11.89□□□□□ -0.51
KIF3A-207ENST00000488471 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
KIF3A-207ENST00000488471 PLEKHG5O94827 1062 aa11.82□□□□□ -0.52
KIF3A-207ENST00000488471 POTEIP0CG38 1075 aa11.8□□□□□ -0.52
KIF3A-207ENST00000488471 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
KIF3A-207ENST00000488471 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
KIF3A-207ENST00000488471 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
KIF3A-207ENST00000488471 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
KIF3A-207ENST00000488471 CCDC61Q9Y6R9 512 aa11.75□□□□□ -0.53
KIF3A-207ENST00000488471 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
KIF3A-207ENST00000488471 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
KIF3A-207ENST00000488471 NUBP1P53384 320 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms