RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 MYH7P12883 1935 aa1.07□□□□□ -2.24
GPNMB-205ENST00000463011 ATG2AQ2TAZ0 1938 aa1.07□□□□□ -2.24
GPNMB-205ENST00000463011 TRBV7-1A0A0A6YYK4 115 aa1.07□□□□□ -2.24
GPNMB-205ENST00000463011 OOSP1A8MZH6 123 aa1.07□□□□□ -2.24
GPNMB-205ENST00000463011 S100PP25815 95 aa1.07□□□□□ -2.24
GPNMB-205ENST00000463011 RPL37P61927 97 aaKnown RBP1.07□□□□□ -2.24
GPNMB-205ENST00000463011 C6orf52Q5T4I8 152 aa1.07□□□□□ -2.24
GPNMB-205ENST00000463011 ROS1P08922 2347 aa1.07□□□□□ -2.24
GPNMB-205ENST00000463011 LAMA4Q16363 1823 aa1.07□□□□□ -2.24
GPNMB-205ENST00000463011 NINQ8N4C6 2090 aa1.06□□□□□ -2.24
GPNMB-205ENST00000463011 ZNF137PP52743 207 aa1.06□□□□□ -2.24
GPNMB-205ENST00000463011 EDDM3BP56851 147 aa1.06□□□□□ -2.24
GPNMB-205ENST00000463011 FXYD6P3P58550 94 aa1.06□□□□□ -2.24
GPNMB-205ENST00000463011 NRXN2Q9P2S2 1712 aa1.06□□□□□ -2.24
GPNMB-205ENST00000463011 CPSF1Q10570 1443 aaKnown RBP1.06□□□□□ -2.24
GPNMB-205ENST00000463011 SIX6O95475 246 aa1.05□□□□□ -2.24
GPNMB-205ENST00000463011 SPINK9Q5DT21 86 aa1.05□□□□□ -2.24
GPNMB-205ENST00000463011 C8orf59Q8N0T1 100 aaPredicted RBP1.05□□□□□ -2.24
GPNMB-205ENST00000463011 ASCC3Q8N3C0 2202 aaKnown RBP1.04□□□□□ -2.24
GPNMB-205ENST00000463011 A0A096LNT2 108 aa1.04□□□□□ -2.24
GPNMB-205ENST00000463011 C20orf202A1L168 122 aa1.04□□□□□ -2.24
GPNMB-205ENST00000463011 AQP10Q96PS8 301 aa1.04□□□□□ -2.24
GPNMB-205ENST00000463011 C12orf57Q99622 126 aa1.04□□□□□ -2.24
GPNMB-205ENST00000463011 IER3IP1Q9Y5U9 82 aa1.04□□□□□ -2.24
GPNMB-205ENST00000463011 HELZ2Q9BYK8 2649 aaKnown RBP1.04□□□□□ -2.24
GPNMB-205ENST00000463011 PZPP20742 1482 aa1.04□□□□□ -2.24
GPNMB-205ENST00000463011 F2Z2F3 143 aa1.03□□□□□ -2.24
GPNMB-205ENST00000463011 C10orf128Q5T292 105 aa1.03□□□□□ -2.24
GPNMB-205ENST00000463011 C5orf38Q86SI9 138 aa1.03□□□□□ -2.24
GPNMB-205ENST00000463011 SVBPQ8N300 66 aa1.03□□□□□ -2.24
GPNMB-205ENST00000463011 Q96NJ1 140 aa1.03□□□□□ -2.24
GPNMB-205ENST00000463011 TCEAL7Q9BRU2 100 aa1.03□□□□□ -2.24
GPNMB-205ENST00000463011 KDM6BO15054 1643 aa1.03□□□□□ -2.24
GPNMB-205ENST00000463011 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.25
GPNMB-205ENST00000463011 ATP6V1G2-DDX39BF2Z307 99 aa1.02□□□□□ -2.25
GPNMB-205ENST00000463011 ACYP2P14621 99 aa1.02□□□□□ -2.25
GPNMB-205ENST00000463011 GTF2H5Q6ZYL4 71 aa1.02□□□□□ -2.25
GPNMB-205ENST00000463011 RIMS1Q86UR5 1692 aaKnown RBP1.02□□□□□ -2.25
GPNMB-205ENST00000463011 TTC9CQ8N5M4 171 aa1.02□□□□□ -2.25
GPNMB-205ENST00000463011 ARAP2Q8WZ64 1704 aa1.02□□□□□ -2.25
GPNMB-205ENST00000463011 SPANXDQ9BXN6 97 aa1.02□□□□□ -2.25
GPNMB-205ENST00000463011 OTOGLQ3ZCN5 2332 aa1.01□□□□□ -2.25
GPNMB-205ENST00000463011 A0A0D9SG42 100 aa1.01□□□□□ -2.25
GPNMB-205ENST00000463011 FAM24AA6NFZ4 105 aa1.01□□□□□ -2.25
GPNMB-205ENST00000463011 C14orf144Q96I85 54 aa1.01□□□□□ -2.25
GPNMB-205ENST00000463011 SPAG17Q6Q759 2223 aa1.01□□□□□ -2.25
GPNMB-205ENST00000463011 PHIPQ8WWQ0 1821 aa1.01□□□□□ -2.25
GPNMB-205ENST00000463011 NWD2Q9ULI1 1742 aa1.01□□□□□ -2.25
GPNMB-205ENST00000463011 MED12Q93074 2177 aa1□□□□□ -2.25
GPNMB-205ENST00000463011 PPIP5K1Q6PFW1 1433 aa1□□□□□ -2.25
GPNMB-205ENST00000463011 TRGV1A0A0A0MS02 117 aa1□□□□□ -2.25
GPNMB-205ENST00000463011 IFITM1P13164 125 aa1□□□□□ -2.25
GPNMB-205ENST00000463011 PRB3Q04118 309 aaPredicted RBP1□□□□□ -2.25
GPNMB-205ENST00000463011 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1□□□□□ -2.25
GPNMB-205ENST00000463011 COMMD6Q7Z4G1 85 aa1□□□□□ -2.25
GPNMB-205ENST00000463011 LRRC37A3O60309 1634 aa1□□□□□ -2.25
GPNMB-205ENST00000463011 MACF1Q9UPN3 7388 aaKnown RBP0.99□□□□□ -2.25
GPNMB-205ENST00000463011 SSSCA1O60232 199 aa0.99□□□□□ -2.25
GPNMB-205ENST00000463011 PPP1R17O96001 155 aa0.99□□□□□ -2.25
GPNMB-205ENST00000463011 TSLPQ969D9 159 aa0.99□□□□□ -2.25
GPNMB-205ENST00000463011 WFDC6Q9BQY6 131 aa0.99□□□□□ -2.25
GPNMB-205ENST00000463011 BPESC1Q9GZL8 116 aa0.99□□□□□ -2.25
GPNMB-205ENST00000463011 ROBO1Q9Y6N7 1651 aa0.99□□□□□ -2.25
GPNMB-205ENST00000463011 NRKQ7Z2Y5 1582 aa0.99□□□□□ -2.25
GPNMB-205ENST00000463011 MYH9P35579 1960 aaKnown RBP0.98□□□□□ -2.25
GPNMB-205ENST00000463011 GVQW2A0A096LPI5 108 aaPredicted RBP0.98□□□□□ -2.25
GPNMB-205ENST00000463011 TRAV1-2A0A0B4J238 106 aa0.98□□□□□ -2.25
GPNMB-205ENST00000463011 UBE2L5PA0A1B0GUS4 154 aa0.98□□□□□ -2.25
GPNMB-205ENST00000463011 UBE2L3P68036 154 aaKnown RBP0.98□□□□□ -2.25
GPNMB-205ENST00000463011 HSD52Q0P140 79 aa0.98□□□□□ -2.25
GPNMB-205ENST00000463011 SMIM11BQ8TCY0 68 aa0.98□□□□□ -2.25
GPNMB-205ENST00000463011 KRTAP4-1Q9BYQ7 146 aa0.98□□□□□ -2.25
GPNMB-205ENST00000463011 CYP4F30PQ9H0H9 118 aa0.98□□□□□ -2.25
GPNMB-205ENST00000463011 LINC00474Q9P2X8 69 aa0.98□□□□□ -2.25
GPNMB-205ENST00000463011 PXDNQ92626 1479 aa0.98□□□□□ -2.25
GPNMB-205ENST00000463011 ABCA4P78363 2273 aa0.98□□□□□ -2.25
GPNMB-205ENST00000463011 PLXNA1Q9UIW2 1896 aa0.97□□□□□ -2.25
GPNMB-205ENST00000463011 SPINK8P0C7L1 97 aa0.97□□□□□ -2.25
GPNMB-205ENST00000463011 SMIM6P0DI80 62 aa0.97□□□□□ -2.25
GPNMB-205ENST00000463011 ATP5EP56381 51 aaPredicted RBP0.97□□□□□ -2.25
GPNMB-205ENST00000463011 MYOZ3Q8TDC0 251 aa0.97□□□□□ -2.25
GPNMB-205ENST00000463011 DPH3P1Q9H4G8 78 aa0.97□□□□□ -2.25
GPNMB-205ENST00000463011 SCP2D1Q9UJQ7 156 aa0.97□□□□□ -2.25
GPNMB-205ENST00000463011 SPTBP11277 2137 aa0.97□□□□□ -2.25
GPNMB-205ENST00000463011 ESPL1Q14674 2120 aa0.97□□□□□ -2.25
GPNMB-205ENST00000463011 MAPKBP1O60336 1514 aa0.96□□□□□ -2.26
GPNMB-205ENST00000463011 CCL18P55774 89 aa0.96□□□□□ -2.26
GPNMB-205ENST00000463011 BAGE3Q86Y29 109 aa0.96□□□□□ -2.26
GPNMB-205ENST00000463011 LENEPQ9Y5L5 61 aa0.96□□□□□ -2.26
GPNMB-205ENST00000463011 MRC1P22897 1456 aa0.96□□□□□ -2.26
GPNMB-205ENST00000463011 C10orf71Q711Q0 1435 aa0.96□□□□□ -2.26
GPNMB-205ENST00000463011 LOC285556D6RIA3 1793 aa0.96□□□□□ -2.26
GPNMB-205ENST00000463011 TNS1Q9HBL0 1735 aaKnown RBP0.95□□□□□ -2.26
GPNMB-205ENST00000463011 CDK13Q14004 1512 aaKnown RBP0.95□□□□□ -2.26
GPNMB-205ENST00000463011 ARFGEF1Q9Y6D6 1849 aa0.95□□□□□ -2.26
GPNMB-205ENST00000463011 TRBV7-3A0A075B6L6 115 aa0.95□□□□□ -2.26
GPNMB-205ENST00000463011 TMEM14DPA8MWL7 114 aa0.95□□□□□ -2.26
GPNMB-205ENST00000463011 RBP2P50120 134 aa0.95□□□□□ -2.26
GPNMB-205ENST00000463011 SPAG11BQ08648 103 aa0.95□□□□□ -2.26
GPNMB-205ENST00000463011 SPAG11AQ6PDA7 123 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms