RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 CXCL1P09341 107 aa9.24□□□□□ -0.93
RFTN1-207ENST00000453536 BCL2P10415 239 aa9.24□□□□□ -0.93
RFTN1-207ENST00000453536 NKX2-5P52952 324 aaPredicted RBP9.24□□□□□ -0.93
RFTN1-207ENST00000453536 RAB4BP61018 213 aa9.24□□□□□ -0.93
RFTN1-207ENST00000453536 EIF5AP63241 154 aaKnown RBP9.24□□□□□ -0.93
RFTN1-207ENST00000453536 MEF2BQ02080 365 aaPredicted RBP9.24□□□□□ -0.93
RFTN1-207ENST00000453536 C15orf54Q8N8G6 183 aa9.24□□□□□ -0.93
RFTN1-207ENST00000453536 MED9Q9NWA0 146 aa9.24□□□□□ -0.93
RFTN1-207ENST00000453536 A0A087WWC5 75 aa9.23□□□□□ -0.93
RFTN1-207ENST00000453536 TRBV6-8A0A0A6YYG3 113 aa9.23□□□□□ -0.93
RFTN1-207ENST00000453536 TRBV10-1A0A0K0K1A3 114 aa9.23□□□□□ -0.93
RFTN1-207ENST00000453536 SUMO4Q6EEV6 95 aa9.23□□□□□ -0.93
RFTN1-207ENST00000453536 ALKAL2Q6UX46 152 aa9.23□□□□□ -0.93
RFTN1-207ENST00000453536 FER1L6-AS1Q8NA97 138 aa9.23□□□□□ -0.93
RFTN1-207ENST00000453536 RNASE7Q9H1E1 156 aaKnown RBP9.23□□□□□ -0.93
RFTN1-207ENST00000453536 BOLA1Q9Y3E2 137 aa9.23□□□□□ -0.93
RFTN1-207ENST00000453536 TRAV8-3A0A0A6YYJ7 113 aa9.22□□□□□ -0.93
RFTN1-207ENST00000453536 TMEM262E9PQX1 116 aa9.22□□□□□ -0.93
RFTN1-207ENST00000453536 INAFM2P0DMQ5 153 aa9.22□□□□□ -0.93
RFTN1-207ENST00000453536 GNG4P50150 75 aa9.22□□□□□ -0.93
RFTN1-207ENST00000453536 GAGE6Q13070 117 aa9.22□□□□□ -0.93
RFTN1-207ENST00000453536 LYZL1Q6UWQ5 148 aa9.22□□□□□ -0.93
RFTN1-207ENST00000453536 SLC51BQ86UW2 128 aa9.22□□□□□ -0.93
RFTN1-207ENST00000453536 URGCP-MRPS24S4R325 110 aa9.22□□□□□ -0.93
RFTN1-207ENST00000453536 A0A087WX48 190 aa9.21□□□□□ -0.94
RFTN1-207ENST00000453536 FOXA3P55318 350 aaPredicted RBP9.21□□□□□ -0.94
RFTN1-207ENST00000453536 ATRAIDQ6UW56 229 aa9.21□□□□□ -0.94
RFTN1-207ENST00000453536 NUDT10Q8NFP7 164 aa9.21□□□□□ -0.94
RFTN1-207ENST00000453536 NUDT11Q96G61 164 aa9.21□□□□□ -0.94
RFTN1-207ENST00000453536 AP1S3Q96PC3 154 aa9.21□□□□□ -0.94
RFTN1-207ENST00000453536 CHCHD5Q9BSY4 110 aa9.21□□□□□ -0.94
RFTN1-207ENST00000453536 TM2D2Q9BX73 214 aa9.21□□□□□ -0.94
RFTN1-207ENST00000453536 GFRA4Q9GZZ7 299 aa9.21□□□□□ -0.94
RFTN1-207ENST00000453536 LRP1Q07954 4544 aaKnown RBP9.21□□□□□ -0.94
RFTN1-207ENST00000453536 TRAV26-2A0A0B4J265 109 aa9.2□□□□□ -0.94
RFTN1-207ENST00000453536 M0QY20 66 aa9.2□□□□□ -0.94
RFTN1-207ENST00000453536 ANGP03950 147 aaKnown RBP9.2□□□□□ -0.94
RFTN1-207ENST00000453536 RAB5CP51148 216 aa9.2□□□□□ -0.94
RFTN1-207ENST00000453536 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
RFTN1-207ENST00000453536 P01737 135 aa9.19□□□□□ -0.94
RFTN1-207ENST00000453536 Q6ZSA8 131 aa9.19□□□□□ -0.94
RFTN1-207ENST00000453536 AKAP14Q86UN6 197 aa9.19□□□□□ -0.94
RFTN1-207ENST00000453536 OCC1Q8TAD7 63 aa9.19□□□□□ -0.94
RFTN1-207ENST00000453536 FRZBQ92765 325 aa9.19□□□□□ -0.94
RFTN1-207ENST00000453536 TMEM70Q9BUB7 260 aa9.19□□□□□ -0.94
RFTN1-207ENST00000453536 VAX2Q9UIW0 290 aa9.19□□□□□ -0.94
RFTN1-207ENST00000453536 HLA-DQA1P01909 254 aa9.18□□□□□ -0.94
RFTN1-207ENST00000453536 RBX1P62877 108 aa9.18□□□□□ -0.94
RFTN1-207ENST00000453536 KRTAP26-1Q6PEX3 210 aa9.18□□□□□ -0.94
RFTN1-207ENST00000453536 GTSF1Q8WW33 167 aa9.18□□□□□ -0.94
RFTN1-207ENST00000453536 DAZAP1Q96EP5 407 aaKnown RBP9.18□□□□□ -0.94
RFTN1-207ENST00000453536 FAT3Q8TDW7 4589 aa9.18□□□□□ -0.94
RFTN1-207ENST00000453536 IGLV10-54A0A075B6I4 117 aa9.17□□□□□ -0.94
RFTN1-207ENST00000453536 TEX46H3BTG2 121 aa9.17□□□□□ -0.94
RFTN1-207ENST00000453536 PDE6DO43924 150 aa9.17□□□□□ -0.94
RFTN1-207ENST00000453536 GAS8-AS1O95177 125 aa9.17□□□□□ -0.94
RFTN1-207ENST00000453536 SMIM17P0DL12 118 aa9.17□□□□□ -0.94
RFTN1-207ENST00000453536 NTF3P20783 257 aa9.17□□□□□ -0.94
RFTN1-207ENST00000453536 SCXQ7RTU7 201 aa9.17□□□□□ -0.94
RFTN1-207ENST00000453536 IGLV4-60A0A075B6I1 120 aa9.16□□□□□ -0.94
RFTN1-207ENST00000453536 IFNA1P01562 189 aa9.16□□□□□ -0.94
RFTN1-207ENST00000453536 CTRLP40313 264 aa9.16□□□□□ -0.94
RFTN1-207ENST00000453536 CEBPGP53567 150 aa9.16□□□□□ -0.94
RFTN1-207ENST00000453536 TOR2AQ5JU69 321 aa9.16□□□□□ -0.94
RFTN1-207ENST00000453536 EIF5AL1Q6IS14 154 aaKnown RBP9.16□□□□□ -0.94
RFTN1-207ENST00000453536 LINC00269Q8N2A0 174 aa9.16□□□□□ -0.94
RFTN1-207ENST00000453536 RPL39LQ96EH5 51 aaKnown RBP9.16□□□□□ -0.94
RFTN1-207ENST00000453536 USP17L23D6RBM5 183 aa9.15□□□□□ -0.94
RFTN1-207ENST00000453536 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.94
RFTN1-207ENST00000453536 C20orf203Q8NBC4 194 aa9.15□□□□□ -0.94
RFTN1-207ENST00000453536 C1orf43Q9BWL3 253 aa9.15□□□□□ -0.94
RFTN1-207ENST00000453536 RPP21Q9H633 154 aaKnown RBP9.15□□□□□ -0.94
RFTN1-207ENST00000453536 PANO1I0J062 215 aa9.14□□□□□ -0.95
RFTN1-207ENST00000453536 CRPP02741 224 aa9.14□□□□□ -0.95
RFTN1-207ENST00000453536 PRSS1P07477 247 aa9.14□□□□□ -0.95
RFTN1-207ENST00000453536 RPS20P60866 119 aaKnown RBP9.14□□□□□ -0.95
RFTN1-207ENST00000453536 CACNG7P62955 275 aa9.14□□□□□ -0.95
RFTN1-207ENST00000453536 GATD1Q8NB37 220 aa9.14□□□□□ -0.95
RFTN1-207ENST00000453536 CHCHD7Q9BUK0 85 aa9.14□□□□□ -0.95
RFTN1-207ENST00000453536 TWIST1Q15672 202 aa9.13□□□□□ -0.95
RFTN1-207ENST00000453536 KCNIP4Q6PIL6 250 aa9.13□□□□□ -0.95
RFTN1-207ENST00000453536 RASL11AQ6T310 242 aa9.13□□□□□ -0.95
RFTN1-207ENST00000453536 RMI2Q96E14 147 aa9.13□□□□□ -0.95
RFTN1-207ENST00000453536 DPH3P1Q9H4G8 78 aa9.13□□□□□ -0.95
RFTN1-207ENST00000453536 TRBV25-1A0A075B6N4 114 aa9.12□□□□□ -0.95
RFTN1-207ENST00000453536 KRTAP10-4P60372 401 aaPredicted RBP9.12□□□□□ -0.95
RFTN1-207ENST00000453536 IQCJQ1A5X6 159 aa9.12□□□□□ -0.95
RFTN1-207ENST00000453536 SMIM12Q96EX1 92 aa9.12□□□□□ -0.95
RFTN1-207ENST00000453536 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
RFTN1-207ENST00000453536 PRR34Q9NV39 138 aa9.12□□□□□ -0.95
RFTN1-207ENST00000453536 IGHV1-24A0A0C4DH33 117 aa9.11□□□□□ -0.95
RFTN1-207ENST00000453536 ELOBQ15370 118 aa9.11□□□□□ -0.95
RFTN1-207ENST00000453536 LYPD6BQ8NI32 183 aa9.11□□□□□ -0.95
RFTN1-207ENST00000453536 CIRBP-AS1Q8TBR5 109 aa9.11□□□□□ -0.95
RFTN1-207ENST00000453536 FAM229AH3BQW9 127 aa9.1□□□□□ -0.95
RFTN1-207ENST00000453536 REG3AQ06141 175 aa9.1□□□□□ -0.95
RFTN1-207ENST00000453536 Q0VG73 95 aa9.1□□□□□ -0.95
RFTN1-207ENST00000453536 CNFNQ9BYD5 112 aa9.1□□□□□ -0.95
RFTN1-207ENST00000453536 NIT2Q9NQR4 276 aa9.1□□□□□ -0.95
RFTN1-207ENST00000453536 COX11Q9Y6N1 276 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms