RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 CNFNQ9BYD5 112 aa8.43□□□□□ -1.06
SSR4-205ENST00000447375 GTSF1LQ9H1H1 148 aa8.43□□□□□ -1.06
SSR4-205ENST00000447375 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
SSR4-205ENST00000447375 A8MWL6 223 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 GATCO43716 136 aaKnown RBP8.42□□□□□ -1.06
SSR4-205ENST00000447375 DNAH10OSP0CZ25 163 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 NTF3P20783 257 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 KRTAP10-1P60331 282 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 ERVFC1-1P60608 527 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 TMEM241Q24JQ0 296 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 CT83Q5H943 113 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 LELP1Q5T871 98 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 WFDC10BQ8IUB3 73 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 OR10G8Q8NGN5 311 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 GTSF1Q8WW33 167 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 AP1S3Q96PC3 154 aa8.42□□□□□ -1.06
SSR4-205ENST00000447375 K7EP13 123 aa8.41□□□□□ -1.06
SSR4-205ENST00000447375 EREGO14944 169 aa8.41□□□□□ -1.06
SSR4-205ENST00000447375 SMIM17P0DL12 118 aa8.41□□□□□ -1.06
SSR4-205ENST00000447375 FOXA3P55318 350 aaPredicted RBP8.41□□□□□ -1.06
SSR4-205ENST00000447375 RAB14P61106 215 aa8.41□□□□□ -1.06
SSR4-205ENST00000447375 OSTCQ9NRP0 149 aa8.41□□□□□ -1.06
SSR4-205ENST00000447375 TRBV7-3A0A075B6L6 115 aa8.4□□□□□ -1.06
SSR4-205ENST00000447375 TRAV9-2A0A087WT02 112 aa8.4□□□□□ -1.06
SSR4-205ENST00000447375 A0A087WWC5 75 aa8.4□□□□□ -1.06
SSR4-205ENST00000447375 TRAV8-6A0A0B4J262 113 aa8.4□□□□□ -1.06
SSR4-205ENST00000447375 F5H697 171 aa8.4□□□□□ -1.06
SSR4-205ENST00000447375 EVI2AP22794 236 aa8.4□□□□□ -1.06
SSR4-205ENST00000447375 RPL36AP83881 106 aaKnown RBP8.4□□□□□ -1.06
SSR4-205ENST00000447375 ZNF56Q15929 161 aa8.4□□□□□ -1.06
SSR4-205ENST00000447375 RPL36ALQ969Q0 106 aaKnown RBP8.4□□□□□ -1.06
SSR4-205ENST00000447375 IGHV3-38A0A0C4DH36 116 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 FAM231BA6NCW3 169 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 TRGC1P0CF51 173 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 UBE2D3P61077 147 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 RPL23P62829 140 aaKnown RBP8.39□□□□□ -1.07
SSR4-205ENST00000447375 UBE2D2P62837 147 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 IFITM2Q01629 132 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 OR10J3Q5JRS4 329 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 CLLU1Q5K131 121 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 NEXN-AS1Q8NBZ9 246 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 TSKUQ8WUA8 353 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 ISOC2Q96AB3 205 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 NAT8Q9UHE5 227 aa8.39□□□□□ -1.07
SSR4-205ENST00000447375 M0QY20 66 aa8.38□□□□□ -1.07
SSR4-205ENST00000447375 HAMPP81172 84 aa8.38□□□□□ -1.07
SSR4-205ENST00000447375 TWIST1Q15672 202 aa8.38□□□□□ -1.07
SSR4-205ENST00000447375 LINC01556Q5JQF7 62 aa8.38□□□□□ -1.07
SSR4-205ENST00000447375 GFRA4Q9GZZ7 299 aa8.38□□□□□ -1.07
SSR4-205ENST00000447375 V9GYV3 84 aa8.38□□□□□ -1.07
SSR4-205ENST00000447375 Q6ZRN7 208 aaPredicted RBP8.37□□□□□ -1.07
SSR4-205ENST00000447375 C15orf54Q8N8G6 183 aa8.37□□□□□ -1.07
SSR4-205ENST00000447375 PGLYRP4Q96LB8 373 aa8.37□□□□□ -1.07
SSR4-205ENST00000447375 DPH3P1Q9H4G8 78 aa8.37□□□□□ -1.07
SSR4-205ENST00000447375 HIGD1CA8MV81 97 aa8.36□□□□□ -1.07
SSR4-205ENST00000447375 H7C1H1 209 aa8.36□□□□□ -1.07
SSR4-205ENST00000447375 MGPP08493 103 aa8.36□□□□□ -1.07
SSR4-205ENST00000447375 ADIRFQ15847 76 aa8.36□□□□□ -1.07
SSR4-205ENST00000447375 SUMO4Q6EEV6 95 aa8.36□□□□□ -1.07
SSR4-205ENST00000447375 C10orf126Q8N4M7 172 aa8.36□□□□□ -1.07
SSR4-205ENST00000447375 DNAJC30Q96LL9 226 aa8.36□□□□□ -1.07
SSR4-205ENST00000447375 TNFRSF18Q9Y5U5 241 aa8.35□□□□□ -1.07
SSR4-205ENST00000447375 LRP1Q07954 4544 aaKnown RBP8.34□□□□□ -1.07
SSR4-205ENST00000447375 A0A1B0GUT8 65 aa8.34□□□□□ -1.07
SSR4-205ENST00000447375 IBA57-AS1B1ANH7 110 aa8.34□□□□□ -1.07
SSR4-205ENST00000447375 GCSHP23434 173 aa8.34□□□□□ -1.07
SSR4-205ENST00000447375 RASL11AQ6T310 242 aa8.34□□□□□ -1.07
SSR4-205ENST00000447375 SMIM15Q7Z3B0 74 aa8.34□□□□□ -1.07
SSR4-205ENST00000447375 DAZ4Q86SG3 579 aaKnown RBP8.34□□□□□ -1.07
SSR4-205ENST00000447375 NFE4Q86UQ8 179 aa8.34□□□□□ -1.07
SSR4-205ENST00000447375 BORCS7Q96B45 105 aa8.34□□□□□ -1.07
SSR4-205ENST00000447375 DAZ3Q9NR90 486 aaKnown RBP8.34□□□□□ -1.07
SSR4-205ENST00000447375 TRBV6-8A0A0A6YYG3 113 aa8.33□□□□□ -1.08
SSR4-205ENST00000447375 NIT1Q86X76 327 aa8.33□□□□□ -1.08
SSR4-205ENST00000447375 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.33□□□□□ -1.08
SSR4-205ENST00000447375 NUP35Q8NFH5 326 aa8.33□□□□□ -1.08
SSR4-205ENST00000447375 DEFB104AQ8WTQ1 72 aa8.33□□□□□ -1.08
SSR4-205ENST00000447375 NIT2Q9NQR4 276 aa8.33□□□□□ -1.08
SSR4-205ENST00000447375 SMIM27A0A1W2PRY6 76 aa8.32□□□□□ -1.08
SSR4-205ENST00000447375 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
SSR4-205ENST00000447375 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
SSR4-205ENST00000447375 PLA2G1BP04054 148 aaKnown RBP8.32□□□□□ -1.08
SSR4-205ENST00000447375 IGHV3-30-3P0DP02 117 aa8.32□□□□□ -1.08
SSR4-205ENST00000447375 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
SSR4-205ENST00000447375 TMEM97Q5BJF2 176 aa8.32□□□□□ -1.08
SSR4-205ENST00000447375 Q8N3U1 123 aa8.32□□□□□ -1.08
SSR4-205ENST00000447375 GATD1Q8NB37 220 aa8.32□□□□□ -1.08
SSR4-205ENST00000447375 NAT8BQ9UHF3 227 aa8.32□□□□□ -1.08
SSR4-205ENST00000447375 FAT3Q8TDW7 4589 aa8.31□□□□□ -1.08
SSR4-205ENST00000447375 A0A087WTM6 91 aa8.31□□□□□ -1.08
SSR4-205ENST00000447375 RIGQ13278 110 aa8.31□□□□□ -1.08
SSR4-205ENST00000447375 LAGE3Q14657 143 aa8.31□□□□□ -1.08
SSR4-205ENST00000447375 NTM-AS1Q6ZSK4 140 aa8.31□□□□□ -1.08
SSR4-205ENST00000447375 TMEM191AQ9H0A3 160 aa8.31□□□□□ -1.08
SSR4-205ENST00000447375 DNAH8Q96JB1 4490 aa8.31□□□□□ -1.08
SSR4-205ENST00000447375 TRAV26-2A0A0B4J265 109 aa8.3□□□□□ -1.08
SSR4-205ENST00000447375 PNRC1Q12796 327 aaPredicted RBP8.3□□□□□ -1.08
SSR4-205ENST00000447375 UQCC3Q6UW78 93 aa8.3□□□□□ -1.08
SSR4-205ENST00000447375 CHCHD7Q9BUK0 85 aa8.3□□□□□ -1.08
SSR4-205ENST00000447375 RNF185Q96GF1 192 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms