RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 ATP6V0E2Q8NHE4 81 aa10.01□□□□□ -0.81
RPUSD3-208ENST00000433972 AP1S3Q96PC3 154 aa10.01□□□□□ -0.81
RPUSD3-208ENST00000433972 TMEM70Q9BUB7 260 aa10.01□□□□□ -0.81
RPUSD3-208ENST00000433972 TM2D2Q9BX73 214 aa10.01□□□□□ -0.81
RPUSD3-208ENST00000433972 TRGC1P0CF51 173 aa10□□□□□ -0.81
RPUSD3-208ENST00000433972 LAGE3Q14657 143 aa10□□□□□ -0.81
RPUSD3-208ENST00000433972 ZNF56Q15929 161 aa10□□□□□ -0.81
RPUSD3-208ENST00000433972 LYZL1Q6UWQ5 148 aa10□□□□□ -0.81
RPUSD3-208ENST00000433972 LINC01551Q86U37 167 aa10□□□□□ -0.81
RPUSD3-208ENST00000433972 SREK1IP1Q8N9Q2 155 aaPredicted RBP10□□□□□ -0.81
RPUSD3-208ENST00000433972 GTSF1LQ9H1H1 148 aa10□□□□□ -0.81
RPUSD3-208ENST00000433972 TRBV10-1A0A0K0K1A3 114 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 GAGE12JA6NER3 117 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 GAGE1Q13065 139 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 GAGE4Q13068 117 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 GAGE5Q13069 117 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 GAGE13Q4V321 117 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 CT83Q5H943 113 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 Q6ZSN1 163 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 SMIM15Q7Z3B0 74 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 C14orf178Q8N769 122 aaPredicted RBP9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 BORCS7Q96B45 105 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 OSTCQ9NRP0 149 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 NAT8Q9UHE5 227 aa9.99□□□□□ -0.81
RPUSD3-208ENST00000433972 LRCOL1A6NCL2 159 aa9.98□□□□□ -0.81
RPUSD3-208ENST00000433972 RPL36AP83881 106 aaKnown RBP9.98□□□□□ -0.81
RPUSD3-208ENST00000433972 TWIST1Q15672 202 aa9.98□□□□□ -0.81
RPUSD3-208ENST00000433972 Q8N814 137 aa9.98□□□□□ -0.81
RPUSD3-208ENST00000433972 RPL36ALQ969Q0 106 aaKnown RBP9.98□□□□□ -0.81
RPUSD3-208ENST00000433972 Q9HAA7 133 aa9.98□□□□□ -0.81
RPUSD3-208ENST00000433972 NTF3P20783 257 aa9.97□□□□□ -0.81
RPUSD3-208ENST00000433972 SRSF3P84103 164 aaKnown RBP9.97□□□□□ -0.81
RPUSD3-208ENST00000433972 ADIRFQ15847 76 aa9.97□□□□□ -0.81
RPUSD3-208ENST00000433972 CLLU1Q5K131 121 aa9.97□□□□□ -0.81
RPUSD3-208ENST00000433972 A0A087WWC5 75 aa9.96□□□□□ -0.82
RPUSD3-208ENST00000433972 TRAV8-3A0A0A6YYJ7 113 aa9.96□□□□□ -0.82
RPUSD3-208ENST00000433972 C9JQL5 133 aa9.96□□□□□ -0.82
RPUSD3-208ENST00000433972 H7C1H1 209 aa9.96□□□□□ -0.82
RPUSD3-208ENST00000433972 CTRLP40313 264 aa9.96□□□□□ -0.82
RPUSD3-208ENST00000433972 TRBV7-3A0A075B6L6 115 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 FAM231BA6NCW3 169 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 IGHV3-30P01768 117 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 IGHV3-33P01772 117 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 MGPP08493 103 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 IGHV3-30-3P0DP02 117 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 IGHV3-30-5P0DP03 117 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 RPL23P62829 140 aaKnown RBP9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 OR10G8Q8NGN5 311 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 TSKUQ8WUA8 353 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 CNFNQ9BYD5 112 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 GFRA4Q9GZZ7 299 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 DPH3P1Q9H4G8 78 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 COX11Q9Y6N1 276 aa9.95□□□□□ -0.82
RPUSD3-208ENST00000433972 FAT1Q14517 4588 aa9.94□□□□□ -0.82
RPUSD3-208ENST00000433972 SMR3BP02814 79 aaPredicted RBP9.94□□□□□ -0.82
RPUSD3-208ENST00000433972 FOXA3P55318 350 aaPredicted RBP9.94□□□□□ -0.82
RPUSD3-208ENST00000433972 ISOC2Q96AB3 205 aa9.94□□□□□ -0.82
RPUSD3-208ENST00000433972 PGLYRP4Q96LB8 373 aa9.94□□□□□ -0.82
RPUSD3-208ENST00000433972 HERC1Q15751 4861 aa9.93□□□□□ -0.82
RPUSD3-208ENST00000433972 GTSF1Q8WW33 167 aa9.93□□□□□ -0.82
RPUSD3-208ENST00000433972 KIF25-AS1Q9Y6Z4 181 aa9.93□□□□□ -0.82
RPUSD3-208ENST00000433972 RMI2Q96E14 147 aa9.92□□□□□ -0.82
RPUSD3-208ENST00000433972 DNAJC30Q96LL9 226 aa9.92□□□□□ -0.82
RPUSD3-208ENST00000433972 URGCP-MRPS24S4R325 110 aa9.92□□□□□ -0.82
RPUSD3-208ENST00000433972 A0A1B0GUT8 65 aa9.91□□□□□ -0.82
RPUSD3-208ENST00000433972 HIGD1CA8MV81 97 aa9.91□□□□□ -0.82
RPUSD3-208ENST00000433972 LINC00694P0DN24 101 aa9.91□□□□□ -0.82
RPUSD3-208ENST00000433972 IFITM2Q01629 132 aa9.91□□□□□ -0.82
RPUSD3-208ENST00000433972 TMEM97Q5BJF2 176 aa9.91□□□□□ -0.82
RPUSD3-208ENST00000433972 V9GYV3 84 aa9.91□□□□□ -0.82
RPUSD3-208ENST00000433972 UBE2D3P61077 147 aa9.9□□□□□ -0.82
RPUSD3-208ENST00000433972 UBE2D2P62837 147 aa9.9□□□□□ -0.82
RPUSD3-208ENST00000433972 RIGQ13278 110 aa9.9□□□□□ -0.82
RPUSD3-208ENST00000433972 KCNIP4Q6PIL6 250 aa9.9□□□□□ -0.82
RPUSD3-208ENST00000433972 UQCC3Q6UW78 93 aa9.9□□□□□ -0.82
RPUSD3-208ENST00000433972 DAZ4Q86SG3 579 aaKnown RBP9.9□□□□□ -0.82
RPUSD3-208ENST00000433972 NEXN-AS1Q8NBZ9 246 aa9.9□□□□□ -0.82
RPUSD3-208ENST00000433972 DAZ3Q9NR90 486 aaKnown RBP9.9□□□□□ -0.82
RPUSD3-208ENST00000433972 Q9UF83 564 aa9.9□□□□□ -0.82
RPUSD3-208ENST00000433972 NAT8BQ9UHF3 227 aa9.9□□□□□ -0.82
RPUSD3-208ENST00000433972 M0QY20 66 aa9.89□□□□□ -0.83
RPUSD3-208ENST00000433972 PPP1R2P9O14990 202 aa9.89□□□□□ -0.83
RPUSD3-208ENST00000433972 PLA2G1BP04054 148 aaKnown RBP9.89□□□□□ -0.83
RPUSD3-208ENST00000433972 PNRC1Q12796 327 aaPredicted RBP9.89□□□□□ -0.83
RPUSD3-208ENST00000433972 SUMO4Q6EEV6 95 aa9.89□□□□□ -0.83
RPUSD3-208ENST00000433972 RASL11AQ6T310 242 aa9.89□□□□□ -0.83
RPUSD3-208ENST00000433972 DMBT1Q9UGM3 2413 aaPredicted RBP9.89□□□□□ -0.83
RPUSD3-208ENST00000433972 ELOBQ15370 118 aa9.88□□□□□ -0.83
RPUSD3-208ENST00000433972 CHCHD7Q9BUK0 85 aa9.88□□□□□ -0.83
RPUSD3-208ENST00000433972 NIT2Q9NQR4 276 aa9.88□□□□□ -0.83
RPUSD3-208ENST00000433972 VPS13BQ7Z7G8 4022 aa9.87□□□□□ -0.83
RPUSD3-208ENST00000433972 HAMPP81172 84 aa9.87□□□□□ -0.83
RPUSD3-208ENST00000433972 NUP35Q8NFH5 326 aa9.87□□□□□ -0.83
RPUSD3-208ENST00000433972 A0A087WX48 190 aa9.86□□□□□ -0.83
RPUSD3-208ENST00000433972 MT-ND4LP03901 98 aa9.86□□□□□ -0.83
RPUSD3-208ENST00000433972 PKIAP61925 76 aa9.86□□□□□ -0.83
RPUSD3-208ENST00000433972 Q8N976 141 aa9.86□□□□□ -0.83
RPUSD3-208ENST00000433972 MYCBP2O75592 4640 aa9.85□□□□□ -0.83
RPUSD3-208ENST00000433972 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
RPUSD3-208ENST00000433972 A0A1B0GW15 77 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms