RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 ZNF818PQ6ZRF7 136 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 C4orf3Q8WVX3 66 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PATE1Q8WXA2 126 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 FAM167A-AS1Q96KT0 104 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PRO0461Q9UI25 63 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 NUMA1Q14980 2115 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 SEC16AO15027 2179 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 SLIT3O75094 1523 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 KDM6BO15054 1643 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PEAK1Q9H792 1746 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 ADAMTS9Q9P2N4 1935 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 TRBV7-3A0A075B6L6 115 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 TRAV23DV6A0A075B6W5 121 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 TRBV6-8A0A0A6YYG3 113 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 NUPR2A6NF83 97 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 SPACA4Q8TDM5 124 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 DMAC1Q96GE9 116 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 LIMD2Q9BT23 127 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MRPL36Q9P0J6 103 aaKnown RBP3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 NCOA2Q15596 1464 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MAGI3Q5TCQ9 1506 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 UGGT2Q9NYU1 1516 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MAP3K4Q9Y6R4 1608 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MYH4Q9Y623 1939 aa3.07□□□□□ -1.92
PTP4A1P1-201ENST00000420539 TRAV22A0A0B4J277 110 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 A0A1B0GVY2 172 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 H3BUT2 72 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 UNC13BO14795 1591 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 LTN1O94822 1766 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 CDK13Q14004 1512 aaKnown RBP3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 Q5VV11 94 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 Q8N6K4 173 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 BPESC1Q9GZL8 116 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 HEATR1Q9H583 2144 aaKnown RBP3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 ANAPC11Q9NYG5 84 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PRO1854Q9UHT4 67 aa3.06□□□□□ -1.92
PTP4A1P1-201ENST00000420539 LTBP2Q14767 1821 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 CLTCQ00610 1675 aaKnown RBP3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 KANTRA0A1W2PQU2 76 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 A8MU10 97 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PMCHL1Q16048 86 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 SPATA45Q537H7 98 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 HEPN1Q6WQI6 88 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 VMO1Q7Z5L0 202 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MYOFQ9NZM1 2061 aa3.05□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PPRC1Q5VV67 1664 aaKnown RBP3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 ABCA8O94911 1581 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MED13Q9UHV7 2174 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MPDZO75970 2070 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 IGKV3-7A0A075B6H7 116 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 A0A0J9YY99 117 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 LRCOL1A6NCL2 159 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 KRTAP1-4P0C5Y4 121 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 IQGAP3Q86VI3 1631 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MYO3AQ8NEV4 1616 aa3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 ZFHX2Q9C0A1 2572 aaPredicted RBP3.04□□□□□ -1.92
PTP4A1P1-201ENST00000420539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 DOCK2Q92608 1830 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 CHKB-CPT1BH3BT56 60 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 EFNA4P52798 201 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 EDDM3BP56851 147 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 SNRPFP62306 86 aaKnown RBP3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 KLKP1Q107X0 134 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 FAM223AQ8IWN6 122 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 C18orf32Q8TCD1 76 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 LINC01600Q96MT4 127 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 COL4A6Q14031 1691 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 CFAP74Q9C0B2 1584 aa3.03□□□□□ -1.92
PTP4A1P1-201ENST00000420539 PLXNA1Q9UIW2 1896 aa3.03□□□□□ -1.93
PTP4A1P1-201ENST00000420539 SDHAF1A6NFY7 115 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 F2Z2F3 143 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 BCE1O60756 84 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 HMGN3Q15651 99 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 SFTA2Q6UW10 78 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 MED12LQ86YW9 2145 aa3.02□□□□□ -1.93
PTP4A1P1-201ENST00000420539 TOP2BQ02880 1626 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 MROH1Q8NDA8 1641 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 ZGRF1Q86YA3 2104 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 CLPSL1A2RUU4 121 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 NRXN1Q9ULB1 1477 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 PTPN23Q9H3S7 1636 aa3.01□□□□□ -1.93
PTP4A1P1-201ENST00000420539 INO80Q9ULG1 1556 aaPredicted RBP3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 KIAA0100Q14667 2235 aaKnown RBP3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 UBR1Q8IWV7 1749 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 TRBV6-4A0A1B0GX49 114 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 A0A1W2PNN7 141 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 IGHV3-30P01768 117 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 COX6CP09669 75 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 IGHV3-30-5P0DP03 117 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 SMIM11AP58511 58 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 KRTAP10-3P60369 221 aa3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 BLMP54132 1417 aaPredicted RBP3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 COL16A1Q07092 1604 aaPredicted RBP3□□□□□ -1.93
PTP4A1P1-201ENST00000420539 ZNF142P52746 1687 aaPredicted RBP2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 IGKV2-28A0A075B6P5 120 aa2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 PPYP01298 95 aa2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 IGKV2D-28P01615 120 aa2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 IGLV6-57P01721 117 aa2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 ZNF56Q15929 161 aa2.99□□□□□ -1.93
PTP4A1P1-201ENST00000420539 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms