RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 CACNA1EQ15878 2313 aa0.3□□□□□ -2.36
CBX3P9-201ENST00000402326 FOCADQ5VW36 1801 aa0.3□□□□□ -2.36
CBX3P9-201ENST00000402326 FAM92AA1XBS5 289 aa0.3□□□□□ -2.36
CBX3P9-201ENST00000402326 SELENOWP63302 87 aa0.3□□□□□ -2.36
CBX3P9-201ENST00000402326 VMO1Q7Z5L0 202 aa0.3□□□□□ -2.36
CBX3P9-201ENST00000402326 LSM10Q969L4 123 aaKnown RBP0.3□□□□□ -2.36
CBX3P9-201ENST00000402326 KDM6BO15054 1643 aa0.3□□□□□ -2.36
CBX3P9-201ENST00000402326 F5P12259 2224 aa0.3□□□□□ -2.36
CBX3P9-201ENST00000402326 CASKIN1Q8WXD9 1431 aa0.3□□□□□ -2.36
CBX3P9-201ENST00000402326 ZNF518AQ6AHZ1 1483 aa0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 SYNE2Q8WXH0 6885 aaKnown RBP0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 MACF1Q9UPN3 7388 aaKnown RBP0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 TRBV10-3A0A0K0K1G6 114 aa0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 LOC100130705A0A1B0GUX0 176 aa0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 K7EP13 123 aa0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 APOC4-APOC2K7ER74 178 aa0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 APODP05090 189 aa0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 RBM3P98179 157 aaKnown RBP0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 MEIG1Q5JSS6 88 aa0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 AGPAT4-IT1Q9H0P7 198 aa0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 LINC00312Q9Y6C7 94 aa0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 CFTRP13569 1480 aa0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 MBD5Q9P267 1494 aa0.29□□□□□ -2.36
CBX3P9-201ENST00000402326 SIPA1L3O60292 1781 aaPredicted RBP0.28□□□□□ -2.36
CBX3P9-201ENST00000402326 TRAV1-2A0A0B4J238 106 aa0.28□□□□□ -2.36
CBX3P9-201ENST00000402326 NMBP08949 121 aa0.28□□□□□ -2.36
CBX3P9-201ENST00000402326 INSL4Q14641 139 aa0.28□□□□□ -2.36
CBX3P9-201ENST00000402326 SPINK6Q6UWN8 80 aa0.28□□□□□ -2.36
CBX3P9-201ENST00000402326 ZNF818PQ6ZRF7 136 aa0.28□□□□□ -2.36
CBX3P9-201ENST00000402326 Q6ZRX8 168 aa0.28□□□□□ -2.36
CBX3P9-201ENST00000402326 APCP25054 2843 aa0.28□□□□□ -2.36
CBX3P9-201ENST00000402326 GOLGA3Q08378 1498 aa0.28□□□□□ -2.37
CBX3P9-201ENST00000402326 IFT140Q96RY7 1462 aa0.28□□□□□ -2.37
CBX3P9-201ENST00000402326 LAMC3Q9Y6N6 1575 aa0.28□□□□□ -2.37
CBX3P9-201ENST00000402326 NWD2Q9ULI1 1742 aa0.27□□□□□ -2.37
CBX3P9-201ENST00000402326 TMEM14DPA8MWL7 114 aa0.27□□□□□ -2.37
CBX3P9-201ENST00000402326 HCG22E2RYF7 251 aa0.27□□□□□ -2.37
CBX3P9-201ENST00000402326 CCL8P80075 99 aa0.27□□□□□ -2.37
CBX3P9-201ENST00000402326 Q8N8P6 123 aa0.27□□□□□ -2.37
CBX3P9-201ENST00000402326 WFDC6Q9BQY6 131 aa0.27□□□□□ -2.37
CBX3P9-201ENST00000402326 SNRNP25Q9BV90 132 aaKnown RBP0.27□□□□□ -2.37
CBX3P9-201ENST00000402326 RERGLQ9H628 205 aa0.27□□□□□ -2.37
CBX3P9-201ENST00000402326 SERP1Q9Y6X1 66 aa0.27□□□□□ -2.37
CBX3P9-201ENST00000402326 TNCP24821 2201 aa0.27□□□□□ -2.37
CBX3P9-201ENST00000402326 KIAA0100Q14667 2235 aaKnown RBP0.27□□□□□ -2.37
CBX3P9-201ENST00000402326 MYH7P12883 1935 aa0.26□□□□□ -2.37
CBX3P9-201ENST00000402326 TRAV13-2A0A0B4J235 113 aa0.26□□□□□ -2.37
CBX3P9-201ENST00000402326 SPAARA0A1B0GVQ0 90 aa0.26□□□□□ -2.37
CBX3P9-201ENST00000402326 MIF4GDA9UHW6 222 aaKnown RBP0.26□□□□□ -2.37
CBX3P9-201ENST00000402326 PHGR1C9JFL3 82 aa0.26□□□□□ -2.37
CBX3P9-201ENST00000402326 GCHFRP30047 84 aa0.26□□□□□ -2.37
CBX3P9-201ENST00000402326 Q6AWC8 147 aa0.26□□□□□ -2.37
CBX3P9-201ENST00000402326 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.26□□□□□ -2.37
CBX3P9-201ENST00000402326 COPS9Q8WXC6 57 aa0.26□□□□□ -2.37
CBX3P9-201ENST00000402326 ZMYM4Q5VZL5 1548 aa0.26□□□□□ -2.37
CBX3P9-201ENST00000402326 ARAP2Q8WZ64 1704 aa0.26□□□□□ -2.37
CBX3P9-201ENST00000402326 JMJD1CQ15652 2540 aa0.25□□□□□ -2.37
CBX3P9-201ENST00000402326 FSIP2Q5CZC0 6907 aa0.25□□□□□ -2.37
CBX3P9-201ENST00000402326 IFT172Q9UG01 1749 aa0.25□□□□□ -2.37
CBX3P9-201ENST00000402326 LRRC37A3O60309 1634 aa0.25□□□□□ -2.37
CBX3P9-201ENST00000402326 UNC13BO14795 1591 aa0.25□□□□□ -2.37
CBX3P9-201ENST00000402326 ROCK2O75116 1388 aaKnown RBP0.25□□□□□ -2.37
CBX3P9-201ENST00000402326 G3V318 75 aa0.25□□□□□ -2.37
CBX3P9-201ENST00000402326 SIX6O95475 246 aa0.25□□□□□ -2.37
CBX3P9-201ENST00000402326 SCP2D1Q9UJQ7 156 aa0.25□□□□□ -2.37
CBX3P9-201ENST00000402326 MYH9P35579 1960 aaKnown RBP0.25□□□□□ -2.37
CBX3P9-201ENST00000402326 A0A1B0GV90 55 aa0.24□□□□□ -2.37
CBX3P9-201ENST00000402326 PPP1R17O96001 155 aa0.24□□□□□ -2.37
CBX3P9-201ENST00000402326 SARNPP82979 210 aaKnown RBP0.24□□□□□ -2.37
CBX3P9-201ENST00000402326 C10orf128Q5T292 105 aa0.24□□□□□ -2.37
CBX3P9-201ENST00000402326 C12orf73Q69YU5 71 aa0.24□□□□□ -2.37
CBX3P9-201ENST00000402326 RPL13AP3Q6NVV1 102 aa0.24□□□□□ -2.37
CBX3P9-201ENST00000402326 C1orf54Q8WWF1 131 aa0.24□□□□□ -2.37
CBX3P9-201ENST00000402326 NAA60Q9H7X0 242 aa0.24□□□□□ -2.37
CBX3P9-201ENST00000402326 DOCK1Q14185 1865 aa0.24□□□□□ -2.37
CBX3P9-201ENST00000402326 PRDM2Q13029 1718 aa0.24□□□□□ -2.37
CBX3P9-201ENST00000402326 PATJQ8NI35 1801 aa0.23□□□□□ -2.37
CBX3P9-201ENST00000402326 CCL18P55774 89 aa0.23□□□□□ -2.37
CBX3P9-201ENST00000402326 COX6A2Q02221 97 aa0.23□□□□□ -2.37
CBX3P9-201ENST00000402326 CATR1Q13166 79 aa0.23□□□□□ -2.37
CBX3P9-201ENST00000402326 Q56UQ5 140 aa0.23□□□□□ -2.37
CBX3P9-201ENST00000402326 BAGE3Q86Y29 109 aa0.23□□□□□ -2.37
CBX3P9-201ENST00000402326 AQP10Q96PS8 301 aa0.23□□□□□ -2.37
CBX3P9-201ENST00000402326 ANKRD17O75179 2603 aaKnown RBP0.23□□□□□ -2.37
CBX3P9-201ENST00000402326 DOCK11Q5JSL3 2073 aa0.23□□□□□ -2.37
CBX3P9-201ENST00000402326 TTC28Q96AY4 2481 aa0.23□□□□□ -2.37
CBX3P9-201ENST00000402326 MRC1P22897 1456 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 NAIPQ13075 1403 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 SMIM6P0DI80 62 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 FGF7P21781 194 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 BTG2P78543 158 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 CFAP126Q5VTH2 177 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 SSBP3-AS1Q7Z2R9 100 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 UBE2DNLQ8IWF7 75 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 TTC9CQ8N5M4 171 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 MAST4O15021 2626 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 MYH8P13535 1937 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 PXDNQ92626 1479 aa0.22□□□□□ -2.37
CBX3P9-201ENST00000402326 CACNA1HO95180 2353 aa0.21□□□□□ -2.38
CBX3P9-201ENST00000402326 QRICH2Q9H0J4 1663 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms