RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 A0A096LPF7 62 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 NTF4P34130 210 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 ZNF672Q499Z4 452 aaPredicted RBP6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 A0A1B0GXF2 115 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 A0A087WZ39 114 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 FAM27E3Q08E93 113 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 C1orf158Q8N1D5 194 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 VOPP1Q96AW1 172 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 CISD3P0C7P0 127 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 ODF1Q14990 250 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 MIR7-3HGQ8N6C7 128 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 X6R8D5 127 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 IGKV1-27A0A075B6S5 117 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 RBX1P62877 108 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 CDPF1Q6NVV7 123 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 TOMM6Q96B49 74 aa6.73□□□□□ -1.33
CACNA1C-220ENST00000399655 MGAMO43451 1857 aa6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 K7EM74 188 aa6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 LINC00474Q9P2X8 69 aa6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 SPTBN4Q9H254 2564 aa6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 A0A0J9YY99 117 aa6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 MUC6Q6W4X9 2439 aa6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 KIF26AQ9ULI4 1882 aaPredicted RBP6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 CRIPAKQ8N1N5 446 aa6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 AHDC1Q5TGY3 1603 aaPredicted RBP6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 IGHV4-30-4P0DP06 118 aa6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 IGHV4-31P0DP07 118 aa6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 SCXQ7RTU7 201 aa6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 FAM30AQ9NZY2 134 aa6.72□□□□□ -1.33
CACNA1C-220ENST00000399655 A0A0J9YXY3 114 aa6.71□□□□□ -1.33
CACNA1C-220ENST00000399655 MUC7Q8TAX7 377 aa6.71□□□□□ -1.33
CACNA1C-220ENST00000399655 C2orf70A6NJV1 201 aa6.71□□□□□ -1.33
CACNA1C-220ENST00000399655 C10orf25Q5T742 122 aa6.71□□□□□ -1.33
CACNA1C-220ENST00000399655 TRBV30A0A0K0K1B3 111 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 TMEM92Q6UXU6 159 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 IGHV2-5P01817 119 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 NAV2Q8IVL1 2488 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 IGHV1-46P01743 117 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 RETNLBQ9BQ08 111 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 MSMBP08118 114 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 ZNF883P0CG24 379 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 FAM19A1Q7Z5A9 133 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 IGKV1D-37A0A075B6S9 117 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 MT-ATP8P03928 68 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 NRXN3Q9Y4C0 1643 aa6.71□□□□□ -1.34
CACNA1C-220ENST00000399655 CELA3BP08861 270 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 IGHV3-30P01768 117 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 IGHV3-33P01772 117 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 IGHV3-30-3P0DP02 117 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 IGHV3-30-5P0DP03 117 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 ACYP2P14621 99 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 SPACA3Q8IXA5 215 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 EPG5Q9HCE0 2579 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 NFE4Q86UQ8 179 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 LOXP28300 417 aaPredicted RBP6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 WDR86Q86TI4 376 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 ADAMTS20P59510 1910 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 NHSQ6T4R5 1651 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 ATP6V0E1O15342 81 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 LINC00694P0DN24 101 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 FOXF2Q12947 444 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 LHFPL1Q86WI0 220 aa6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 RNASE8Q8TDE3 154 aaKnown RBP6.7□□□□□ -1.34
CACNA1C-220ENST00000399655 C3orf84H3BNL1 204 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 GGNQ86UU5 652 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 WFDC13Q8IUB5 93 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 Q6Q795 121 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 TRAV10A0A0B4J240 114 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 hDV103S1A0JD37 113 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 LRCOL1A6NCL2 159 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 PSPHP1O15172 72 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 SIRPDQ9H106 197 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 FXYD2P54710 66 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 COX17Q14061 63 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 TRBV10-1A0A0K0K1A3 114 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 LUZP6Q538Z0 58 aa6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 SETD2Q9BYW2 2564 aaPredicted RBP6.69□□□□□ -1.34
CACNA1C-220ENST00000399655 A0A1B0GU69 56 aa6.68□□□□□ -1.34
CACNA1C-220ENST00000399655 WT1P19544 449 aaPredicted RBP6.68□□□□□ -1.34
CACNA1C-220ENST00000399655 IBA57-AS1B1ANH7 110 aa6.68□□□□□ -1.34
CACNA1C-220ENST00000399655 RPP25Q9BUL9 199 aaKnown RBP6.68□□□□□ -1.34
CACNA1C-220ENST00000399655 SPINK6Q6UWN8 80 aa6.68□□□□□ -1.34
CACNA1C-220ENST00000399655 MDFICQ9P1T7 246 aa6.68□□□□□ -1.34
CACNA1C-220ENST00000399655 C10orf55Q5SWW7 151 aa6.68□□□□□ -1.34
CACNA1C-220ENST00000399655 SHISA3A0PJX4 238 aa6.68□□□□□ -1.34
CACNA1C-220ENST00000399655 THSD7AQ9UPZ6 1657 aa6.68□□□□□ -1.34
CACNA1C-220ENST00000399655 ADAMTS7Q9UKP4 1686 aa6.68□□□□□ -1.34
CACNA1C-220ENST00000399655 LINC00322Q6ZN03 302 aaPredicted RBP6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 NPBQ8NG41 125 aa6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 C19orf48Q6RUI8 117 aa6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 ESRGQ1W209 222 aa6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 BRD3OSQ6XYD6 125 aa6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 IGFL4Q6B9Z1 124 aa6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 K7EN84 100 aa6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 PRM2P04554 102 aa6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 Q8NFD4 153 aa6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 ZNF831Q5JPB2 1677 aa6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 LINC00311Q8N616 119 aa6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 KIAA1549LQ6ZVL6 1849 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms