RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 WDR73Q6P4I2 378 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 LYZL1Q6UWQ5 148 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 C10orf126Q8N4M7 172 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 TPPP3Q9BW30 176 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 MSRB1Q9NZV6 116 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 KIF25-AS1Q9Y6Z4 181 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 HECTD4Q9Y4D8 3996 aa6.67□□□□□ -1.34
CD48-202ENST00000368046 IBA57-AS1B1ANH7 110 aa6.66□□□□□ -1.34
CD48-202ENST00000368046 F5H697 171 aa6.66□□□□□ -1.34
CD48-202ENST00000368046 SRP19P09132 144 aaKnown RBP6.66□□□□□ -1.34
CD48-202ENST00000368046 NTF3P20783 257 aa6.66□□□□□ -1.34
CD48-202ENST00000368046 CEBPGP53567 150 aa6.66□□□□□ -1.34
CD48-202ENST00000368046 ZNF56Q15929 161 aa6.66□□□□□ -1.34
CD48-202ENST00000368046 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
CD48-202ENST00000368046 FAM231DQ6ZW35 169 aa6.66□□□□□ -1.34
CD48-202ENST00000368046 OR10G8Q8NGN5 311 aa6.66□□□□□ -1.34
CD48-202ENST00000368046 RNASE7Q9H1E1 156 aaKnown RBP6.66□□□□□ -1.34
CD48-202ENST00000368046 GATCO43716 136 aaKnown RBP6.65□□□□□ -1.34
CD48-202ENST00000368046 UBE2D3P61077 147 aa6.65□□□□□ -1.34
CD48-202ENST00000368046 UBE2D2P62837 147 aa6.65□□□□□ -1.34
CD48-202ENST00000368046 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.65□□□□□ -1.34
CD48-202ENST00000368046 AP1S3Q96PC3 154 aa6.65□□□□□ -1.34
CD48-202ENST00000368046 SMIM7Q9BQ49 75 aa6.65□□□□□ -1.34
CD48-202ENST00000368046 RPP21Q9H633 154 aaKnown RBP6.65□□□□□ -1.34
CD48-202ENST00000368046 ZNF727A8MUV8 499 aa6.64□□□□□ -1.35
CD48-202ENST00000368046 A8MWL6 223 aa6.64□□□□□ -1.35
CD48-202ENST00000368046 IGHV3-30P01768 117 aa6.64□□□□□ -1.35
CD48-202ENST00000368046 IGHV3-33P01772 117 aa6.64□□□□□ -1.35
CD48-202ENST00000368046 TRGC1P0CF51 173 aa6.64□□□□□ -1.35
CD48-202ENST00000368046 IGHV3-30-3P0DP02 117 aa6.64□□□□□ -1.35
CD48-202ENST00000368046 IGHV3-30-5P0DP03 117 aa6.64□□□□□ -1.35
CD48-202ENST00000368046 FOXA3P55318 350 aaPredicted RBP6.64□□□□□ -1.35
CD48-202ENST00000368046 ERVFC1-1P60608 527 aa6.64□□□□□ -1.35
CD48-202ENST00000368046 NEXN-AS1Q8NBZ9 246 aa6.64□□□□□ -1.35
CD48-202ENST00000368046 SMDT1Q9H4I9 107 aa6.64□□□□□ -1.35
CD48-202ENST00000368046 PEA15Q15121 130 aa6.63□□□□□ -1.35
CD48-202ENST00000368046 TWIST1Q15672 202 aa6.63□□□□□ -1.35
CD48-202ENST00000368046 TMEM241Q24JQ0 296 aa6.63□□□□□ -1.35
CD48-202ENST00000368046 FAM74A3Q4VXF1 159 aa6.63□□□□□ -1.35
CD48-202ENST00000368046 LINC01551Q86U37 167 aa6.63□□□□□ -1.35
CD48-202ENST00000368046 DNAJC30Q96LL9 226 aa6.63□□□□□ -1.35
CD48-202ENST00000368046 CNFNQ9BYD5 112 aa6.63□□□□□ -1.35
CD48-202ENST00000368046 TRBV6-8A0A0A6YYG3 113 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 H7C1H1 209 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 M0QY20 66 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 CTRLP40313 264 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 TMEM97Q5BJF2 176 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 CT83Q5H943 113 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 SPATA12Q7Z6I5 190 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 DAZ4Q86SG3 579 aaKnown RBP6.62□□□□□ -1.35
CD48-202ENST00000368046 NIT1Q86X76 327 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 GTSF1Q8WW33 167 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 DPH3P1Q9H4G8 78 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 DAZ3Q9NR90 486 aaKnown RBP6.62□□□□□ -1.35
CD48-202ENST00000368046 OSTCQ9NRP0 149 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 DNAH11Q96DT5 4516 aa6.62□□□□□ -1.35
CD48-202ENST00000368046 FAM231BA6NCW3 169 aa6.61□□□□□ -1.35
CD48-202ENST00000368046 MGPP08493 103 aa6.61□□□□□ -1.35
CD48-202ENST00000368046 LAGE3Q14657 143 aa6.61□□□□□ -1.35
CD48-202ENST00000368046 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
CD48-202ENST00000368046 NIT2Q9NQR4 276 aa6.61□□□□□ -1.35
CD48-202ENST00000368046 URGCP-MRPS24S4R325 110 aa6.61□□□□□ -1.35
CD48-202ENST00000368046 A0A087WTM6 91 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 A0A087WX48 190 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 TRAV8-3A0A0A6YYJ7 113 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 C16orf90A8MZG2 172 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 C9JQL5 133 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 TMEM262E9PQX1 116 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 PSCAO43653 123 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 KRTAP10-2P60368 255 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 SRSF3P84103 164 aaKnown RBP6.6□□□□□ -1.35
CD48-202ENST00000368046 ELOBQ15370 118 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 SUMO4Q6EEV6 95 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 KCNIP4Q6PIL6 250 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 RASL11AQ6T310 242 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 SMIM15Q7Z3B0 74 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 TSKUQ8WUA8 353 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 PGLYRP4Q96LB8 373 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 CHCHD7Q9BUK0 85 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 TM2D2Q9BX73 214 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 GFRA4Q9GZZ7 299 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 Q9HAA7 133 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 KIAA1109Q2LD37 5005 aa6.6□□□□□ -1.35
CD48-202ENST00000368046 DYNC1H1Q14204 4646 aaKnown RBP6.59□□□□□ -1.35
CD48-202ENST00000368046 RPL23P62829 140 aaKnown RBP6.59□□□□□ -1.35
CD48-202ENST00000368046 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.35
CD48-202ENST00000368046 NTM-AS1Q6ZSK4 140 aa6.59□□□□□ -1.35
CD48-202ENST00000368046 C15orf54Q8N8G6 183 aa6.59□□□□□ -1.35
CD48-202ENST00000368046 FRZBQ92765 325 aa6.59□□□□□ -1.35
CD48-202ENST00000368046 NAT8Q9UHE5 227 aa6.59□□□□□ -1.35
CD48-202ENST00000368046 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.35
CD48-202ENST00000368046 RAB14P61106 215 aa6.58□□□□□ -1.36
CD48-202ENST00000368046 PKIAP61925 76 aa6.58□□□□□ -1.36
CD48-202ENST00000368046 ISOC2Q96AB3 205 aa6.58□□□□□ -1.36
CD48-202ENST00000368046 BORCS7Q96B45 105 aa6.58□□□□□ -1.36
CD48-202ENST00000368046 CHCHD5Q9BSY4 110 aa6.58□□□□□ -1.36
CD48-202ENST00000368046 KLK12Q9UKR0 248 aa6.58□□□□□ -1.36
CD48-202ENST00000368046 COX11Q9Y6N1 276 aa6.58□□□□□ -1.36
CD48-202ENST00000368046 V9GYV3 84 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms