RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 LGALS9BQ3B8N2 356 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 LGALS9CQ6DKI2 356 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 TMEM263Q8WUH6 116 aaKnown RBP8.35□□□□□ -1.07
CLCN6-202ENST00000346436 C9orf118A6NHY6 69 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 AGPAT4-IT1Q9H0P7 198 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 NDUFA7O95182 113 aa8.34□□□□□ -1.07
CLCN6-202ENST00000346436 Q8N8P6 123 aa8.34□□□□□ -1.07
CLCN6-202ENST00000346436 COL5A1P20908 1838 aaPredicted RBP8.34□□□□□ -1.07
CLCN6-202ENST00000346436 FSHBP01225 129 aa8.34□□□□□ -1.07
CLCN6-202ENST00000346436 IGLV1-47P01700 117 aa8.34□□□□□ -1.07
CLCN6-202ENST00000346436 DEFB1P60022 68 aa8.34□□□□□ -1.07
CLCN6-202ENST00000346436 SUMO4Q6EEV6 95 aa8.34□□□□□ -1.07
CLCN6-202ENST00000346436 TMEM61Q8N0U2 210 aa8.34□□□□□ -1.07
CLCN6-202ENST00000346436 B9D2Q9BPU9 175 aa8.34□□□□□ -1.07
CLCN6-202ENST00000346436 C20orf78Q9BR46 151 aa8.33□□□□□ -1.08
CLCN6-202ENST00000346436 ESM1Q9NQ30 184 aa8.33□□□□□ -1.08
CLCN6-202ENST00000346436 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
CLCN6-202ENST00000346436 DEFB4AO15263 64 aa8.33□□□□□ -1.08
CLCN6-202ENST00000346436 TIMM17AQ99595 171 aa8.33□□□□□ -1.08
CLCN6-202ENST00000346436 CTSGP08311 255 aa8.33□□□□□ -1.08
CLCN6-202ENST00000346436 ZFAND6Q6FIF0 208 aa8.33□□□□□ -1.08
CLCN6-202ENST00000346436 SPANXA1Q9NS26 97 aa8.33□□□□□ -1.08
CLCN6-202ENST00000346436 LGALS9O00182 355 aa8.32□□□□□ -1.08
CLCN6-202ENST00000346436 SIGMAR1Q99720 223 aa8.32□□□□□ -1.08
CLCN6-202ENST00000346436 GNRH2O43555 120 aa8.32□□□□□ -1.08
CLCN6-202ENST00000346436 TRAV8-2A0A0B4J237 113 aa8.32□□□□□ -1.08
CLCN6-202ENST00000346436 K7EP13 123 aa8.32□□□□□ -1.08
CLCN6-202ENST00000346436 CXCL5P42830 114 aa8.32□□□□□ -1.08
CLCN6-202ENST00000346436 ZNF625Q96I27 306 aaPredicted RBP8.32□□□□□ -1.08
CLCN6-202ENST00000346436 C19orf71A6NCJ1 209 aa8.32□□□□□ -1.08
CLCN6-202ENST00000346436 NDUFA12Q9UI09 145 aa8.31□□□□□ -1.08
CLCN6-202ENST00000346436 GAGE2EQ4V326 116 aa8.31□□□□□ -1.08
CLCN6-202ENST00000346436 GAGE2DQ9UEU5 116 aa8.31□□□□□ -1.08
CLCN6-202ENST00000346436 ARHGAP32A7KAX9 2087 aa8.31□□□□□ -1.08
CLCN6-202ENST00000346436 TRAV13-2A0A0B4J235 113 aa8.31□□□□□ -1.08
CLCN6-202ENST00000346436 NDUFB1O75438 58 aa8.31□□□□□ -1.08
CLCN6-202ENST00000346436 LINC01545Q5VT33 79 aa8.31□□□□□ -1.08
CLCN6-202ENST00000346436 SLC25A29Q8N8R3 303 aa8.31□□□□□ -1.08
CLCN6-202ENST00000346436 MAP6D1Q9H9H5 199 aa8.31□□□□□ -1.08
CLCN6-202ENST00000346436 LINC00310P59036 64 aa8.3□□□□□ -1.08
CLCN6-202ENST00000346436 ETDBQ3ZM63 59 aa8.3□□□□□ -1.08
CLCN6-202ENST00000346436 A0A1B0GXF2 115 aa8.3□□□□□ -1.08
CLCN6-202ENST00000346436 K7EP34 96 aa8.3□□□□□ -1.08
CLCN6-202ENST00000346436 CRYGCP07315 174 aa8.3□□□□□ -1.08
CLCN6-202ENST00000346436 LINC01006Q8NI28 216 aa8.3□□□□□ -1.08
CLCN6-202ENST00000346436 A0A1W2PPM0 123 aa8.3□□□□□ -1.08
CLCN6-202ENST00000346436 TAX1BP3O14907 124 aa8.3□□□□□ -1.08
CLCN6-202ENST00000346436 CRYGDP07320 174 aa8.3□□□□□ -1.08
CLCN6-202ENST00000346436 HERV-K104P63124 156 aa8.3□□□□□ -1.08
CLCN6-202ENST00000346436 KLK12Q9UKR0 248 aa8.3□□□□□ -1.08
CLCN6-202ENST00000346436 H3BMG7 143 aa8.29□□□□□ -1.08
CLCN6-202ENST00000346436 NHLRC4P0CG21 123 aaPredicted RBP8.29□□□□□ -1.08
CLCN6-202ENST00000346436 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
CLCN6-202ENST00000346436 ATRXP46100 2492 aa8.29□□□□□ -1.08
CLCN6-202ENST00000346436 UBE2D1P51668 147 aa8.29□□□□□ -1.08
CLCN6-202ENST00000346436 ODF1Q14990 250 aa8.29□□□□□ -1.08
CLCN6-202ENST00000346436 A0A1B0GV72 72 aa8.29□□□□□ -1.08
CLCN6-202ENST00000346436 IGF1P05019 195 aa8.29□□□□□ -1.08
CLCN6-202ENST00000346436 ZNF80P51504 273 aaPredicted RBP8.29□□□□□ -1.08
CLCN6-202ENST00000346436 WI2-2373I1.2A0A1W2PRP0 233 aa8.28□□□□□ -1.08
CLCN6-202ENST00000346436 NDUFS5O43920 106 aa8.28□□□□□ -1.08
CLCN6-202ENST00000346436 XIRP2A4UGR9 3374 aa8.28□□□□□ -1.08
CLCN6-202ENST00000346436 IGLV10-54A0A075B6I4 117 aa8.28□□□□□ -1.08
CLCN6-202ENST00000346436 TRAV4A0A0B4J268 109 aa8.28□□□□□ -1.08
CLCN6-202ENST00000346436 VSIG2Q96IQ7 327 aa8.28□□□□□ -1.08
CLCN6-202ENST00000346436 LINC00574Q9H8X3 128 aa8.28□□□□□ -1.08
CLCN6-202ENST00000346436 CEND1Q8N111 149 aa8.28□□□□□ -1.08
CLCN6-202ENST00000346436 TRBV7-3A0A075B6L6 115 aa8.27□□□□□ -1.08
CLCN6-202ENST00000346436 MLST8Q9BVC4 326 aa8.27□□□□□ -1.08
CLCN6-202ENST00000346436 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.09
CLCN6-202ENST00000346436 C11orf71Q6IPW1 123 aa8.27□□□□□ -1.09
CLCN6-202ENST00000346436 ODF3BA8MYP8 253 aa8.27□□□□□ -1.09
CLCN6-202ENST00000346436 SOCS3O14543 225 aa8.27□□□□□ -1.09
CLCN6-202ENST00000346436 PSMG3-AS1Q96PY0 264 aa8.27□□□□□ -1.09
CLCN6-202ENST00000346436 DSCR8Q96T75 97 aa8.27□□□□□ -1.09
CLCN6-202ENST00000346436 NCOR2Q9Y618 2525 aa8.27□□□□□ -1.09
CLCN6-202ENST00000346436 U3KQK5 164 aa8.27□□□□□ -1.09
CLCN6-202ENST00000346436 TRAV8-4A0A0B4J246 113 aa8.27□□□□□ -1.09
CLCN6-202ENST00000346436 FAM222AQ5U5X8 452 aa8.27□□□□□ -1.09
CLCN6-202ENST00000346436 SPATA12Q7Z6I5 190 aa8.27□□□□□ -1.09
CLCN6-202ENST00000346436 TRBV10-1A0A0K0K1A3 114 aa8.26□□□□□ -1.09
CLCN6-202ENST00000346436 DEFB114Q30KQ6 69 aa8.26□□□□□ -1.09
CLCN6-202ENST00000346436 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
CLCN6-202ENST00000346436 FAM110AQ9BQ89 295 aa8.26□□□□□ -1.09
CLCN6-202ENST00000346436 TRAV26-1A0A087WT03 109 aa8.26□□□□□ -1.09
CLCN6-202ENST00000346436 CTRLP40313 264 aa8.26□□□□□ -1.09
CLCN6-202ENST00000346436 FXYD2P54710 66 aa8.26□□□□□ -1.09
CLCN6-202ENST00000346436 BOD1L2Q8IYS8 172 aa8.26□□□□□ -1.09
CLCN6-202ENST00000346436 CSPG4Q6UVK1 2322 aa8.26□□□□□ -1.09
CLCN6-202ENST00000346436 F8VRH5 84 aa8.26□□□□□ -1.09
CLCN6-202ENST00000346436 FUSP35637 526 aaKnown RBP eCLIP8.26□□□□□ -1.09
CLCN6-202ENST00000346436 IGF2RP11717 2491 aa8.25□□□□□ -1.09
CLCN6-202ENST00000346436 DSCAMO60469 2012 aa8.25□□□□□ -1.09
CLCN6-202ENST00000346436 H3BQ85 93 aa8.25□□□□□ -1.09
CLCN6-202ENST00000346436 SPAG11BQ08648 103 aa8.25□□□□□ -1.09
CLCN6-202ENST00000346436 NACAE9PAV3 2078 aa8.25□□□□□ -1.09
CLCN6-202ENST00000346436 DSCAML1Q8TD84 2053 aa8.25□□□□□ -1.09
CLCN6-202ENST00000346436 LRCOL1A6NCL2 159 aa8.25□□□□□ -1.09
CLCN6-202ENST00000346436 SIVA1O15304 175 aa8.25□□□□□ -1.09
CLCN6-202ENST00000346436 CRIP1P50238 77 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms