RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Hsbp1Q9CQZ1 76 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ssbp2Q9CYZ8 361 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Atp6v1fQ9D1K2 119 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Zfp119aQ9JIC0 545 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rnase4Q9JJH1 148 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Trbv31A0A075B5J5 111 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ighv1-19A0A0A6YWX0 117 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Vma21-psA0A140T8R2 101 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr1248A0A1L1SSZ5 307 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr1124A2AT86 318 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm20767O70517 169 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Fgf4P11403 202 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rnf150Q5DTZ6 437 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr823Q7TRH2 315 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Iba57Q8CAK1 358 aaKnown RBP6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 RetnlgQ8K426 117 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Vstm2aQ8R0A6 236 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr824Q8VFU4 315 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr1294Q8VGE5 312 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Sec11cQ9D8V7 192 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ankhd1E9PUR0 2548 aaKnown RBP6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ighv1-55A0A075B5W6 117 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Tex54G3UW99 86 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ucp1P12242 307 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Cfc1P97766 202 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Zfp970Q08BU3 522 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Vmn1r66Q8K4I0 310 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gp2Q9D733 531 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Aurkaip1Q9DCJ7 200 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Fbxl17Q9QZN1 701 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Arpc1bQ9WV32 372 aaKnown RBP6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Muc4Q8JZM8 3443 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr1191-ps1A0A1L1STD5 311 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Tstd1E9PY03 133 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm15130F6PYN5 206 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 NdpP48744 131 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Psg27Q497W2 474 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 CrygcQ61597 174 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Fam206aQ80ZQ9 193 aaKnown RBP6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Psg22Q810J1 475 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Zfp874aQ8BX23 447 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Chac2Q9CQG1 178 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Tnfrsf13bQ9ET35 249 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Hdgfl3Q9JMG7 202 aa6.92□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ighv1-26A0A075B5V0 117 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr913E9Q716 312 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Wdr83osQ6ZWX0 106 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 BC049730Q810N3 246 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 1810024B03RikQ8BWE1 200 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Tsen54Q8C2A2 525 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Zim1Q8C393 579 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Parp11Q8CFF0 331 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr1086Q8VFL9 310 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr346Q8VGJ7 309 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Polr3kQ9CQZ7 108 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 2200002J24RikQ9D807 110 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gtsf1Q9DAN6 167 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ighv1-69A0A0G2JFS5 117 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Igkv1-131A0A140T8M8 120 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Akirin2B1AXD8 201 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rnf5O35445 180 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Cited2O35740 269 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ifitm5O88728 134 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 P01643 108 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 P01659 112 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Edn2P22389 175 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Reg1P43137 165 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Loxl2P58022 776 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Pilrb2Q2YFS1 225 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Arrdc5Q497K5 325 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rph3alQ768S4 302 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr335-psQ7TRY6 312 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Cbln2Q8BGU2 224 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 A930004D18RikQ8C8W7 157 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 RpeQ8VEE0 228 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ms4a4cQ9D3F6 226 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 VsirQ9D659 308 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rnd2Q9QYM5 227 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Arpc1aQ9R0Q6 370 aa6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 StrapQ9Z1Z2 350 aaKnown RBP6.91□□□□□ -1.3
Trim39-201ENSMUST00000042717 Zfp980A2A9J5 645 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Sf3a2Q62203 475 aaKnown RBP6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Dnd1Q6VY05 352 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ifna14Q810G3 189 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Q8BG31 207 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr113Q8VEU4 312 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr495Q8VF12 330 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Atp6v0e1Q9CQD8 81 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Pla2g2dQ9WVF6 144 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Prss1Q9Z1R9 246 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Trav17A0A075B655 113 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Igkv4-57A0A0A6YYE7 117 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Trbv12-2A0A0B4J1H1 124 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Pglyrp3A1A547 347 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Vmn1r160E9Q346 307 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Vmn1r123L7N270 307 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Mef2bO55087 349 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Csn2P10598 231 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 PpyP10601 100 aa6.9□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rab5cP35278 216 aa6.9□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 76.3 ms