RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 2200002J24RikQ9D807 110 aa13.89□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Olfr364-ps1A0A140T8Q2 307 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Smim13E9Q942 88 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 CrygsO35486 178 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Snrpd3P62320 126 aaKnown RBP13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Olfr149Q60888 311 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 CcsQ9WU84 274 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Igkv14-126A0A075B5K0 117 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Ighv1-76A0A0G2JFE9 117 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 AsmtD3KU66 387 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 AgerQ62151 402 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Try10Q792Z1 246 aaKnown RBP13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Olfr1258Q8VGN6 311 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Dnal4Q9DCM4 105 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Sec16aA2AIX1 2377 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Med13Q5SWW4 2171 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Col11a1Q61245 1804 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 D830044I16RikA0A1D5RM53 117 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Pglyrp3A1A547 347 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Rnf212F6TQD1 307 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Gm27021M0QWE2 156 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Zfp36l2P23949 484 aaKnown RBP13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Olfr223Q8VF69 319 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Fmc1Q9CR13 113 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Pcnx1Q9QYC1 2344 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Pax9P47242 342 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Adra2aQ01338 450 aa13.88□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Ighv5-16A0A0B4J1P4 117 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 E430018J23RikE9PZQ8 461 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Sod1P08228 154 aaKnown RBP13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 PcolceQ61398 468 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Ormdl3Q9CPZ6 153 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Carhsp1Q9CR86 148 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 6430628N08RikA0A0U1RQ45 177 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Tmem88bQ3TYP4 173 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Defa24Q5G865 93 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Atp5lQ9CPQ8 103 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 CenpvQ9CXS4 252 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Bhlha15Q9QYC3 197 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Irf2bp2E9Q1P8 570 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Gm21913J3KML9 361 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Gm21776J3QPJ5 361 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 CfdP03953 259 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Klk1b22P15948 259 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Rpl23P62830 140 aaKnown RBP13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Htr1dQ61224 374 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Olfr1012Q8VFJ7 311 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Rbmxl2Q9DAE2 385 aaKnown RBP13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 BC053393A0A0B4J1F6 192 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Tmem29A2ANF5 204 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Dkk1O54908 272 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 PpoxP51175 477 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Atp5g2P56383 146 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Errfi1Q99JZ7 461 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Fgf16Q9ESL8 207 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Arpc1aQ9R0Q6 370 aa13.87□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Dicer1Q8R418 1916 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Wnt5bP22726 359 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Bsph1Q3UW26 133 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Olfr150Q60895 312 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Foxg1Q60987 481 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Gm14214V9GX35 225 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Cacna1eQ61290 2272 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 CenpeQ6RT24 2474 aaKnown RBP13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Trav7-4A0A075B6C1 113 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 HrkP62816 92 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Trav7d-4Q5R1H9 113 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 MavsQ8VCF0 503 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Tmem100Q9CQG9 134 aa13.86□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Trav6n-5A0A075B621 112 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Trav6-5A0A075B6B5 112 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 H2-M10.4Q85ZW8 331 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Trav6-1A0A075B5Z8 112 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Vmn1r1E9PVR6 306 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Gm21719J3KMI9 230 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Csrp1P97315 193 aaKnown RBP13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Ovol2Q8CIV7 274 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 BmperQ8CJ69 685 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 ChtopQ9CY57 249 aaKnown RBP13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Myo16Q5DU14 1919 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Gm21974F6W3F3 119 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Olfr904Q7TRC9 310 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Gm12355A2A4X6 163 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Zcchc24B2RVL6 241 aaKnown RBP13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Srsf3P84104 164 aaKnown RBP13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Ripply2Q2WG76 128 aa13.85□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Zfp407G3UVV3 2246 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Scgb1b19F6WYW0 93 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 P01801 115 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 KncnQ307W7 124 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Thsd7bQ6P4U0 1607 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Igh-VJ558P01758 117 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Sox21Q811W0 276 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Zdhhc16Q9ESG8 361 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Smad7O35253 426 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 S100a8P27005 89 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 ApohQ01339 345 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Cd200r1Q9ES57 326 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 P01723 117 aa13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 EtdQ80SW5 59 aa13.84□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 199.9 ms