RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 IGHV3-73A0A0B4J1V6 119 aa12.03□□□□□ -0.48
CLN6-218ENST00000637223 NUDT3O95989 172 aa12.03□□□□□ -0.48
CLN6-218ENST00000637223 OR5AL1P0C617 328 aa12.03□□□□□ -0.48
CLN6-218ENST00000637223 IGLC6P0CF74 106 aa12.03□□□□□ -0.48
CLN6-218ENST00000637223 S100PP25815 95 aa12.03□□□□□ -0.48
CLN6-218ENST00000637223 FER1L6-AS1Q8NA97 138 aa12.03□□□□□ -0.48
CLN6-218ENST00000637223 SSBP4Q9BWG4 385 aaPredicted RBP12.03□□□□□ -0.48
CLN6-218ENST00000637223 ALMS1Q8TCU4 4167 aa12.03□□□□□ -0.48
CLN6-218ENST00000637223 PIK3CD-AS1Q5SR53 167 aa12.02□□□□□ -0.49
CLN6-218ENST00000637223 SPANXN1Q5VSR9 72 aa12.02□□□□□ -0.49
CLN6-218ENST00000637223 KCNIP4Q6PIL6 250 aa12.02□□□□□ -0.49
CLN6-218ENST00000637223 CBLN2Q8IUK8 224 aa12.02□□□□□ -0.49
CLN6-218ENST00000637223 C15orf53Q8NAA6 179 aa12.02□□□□□ -0.49
CLN6-218ENST00000637223 VSIG2Q96IQ7 327 aa12.02□□□□□ -0.49
CLN6-218ENST00000637223 HHLA3Q9XRX5 114 aa12.02□□□□□ -0.49
CLN6-218ENST00000637223 FAM231BA6NCW3 169 aa12.01□□□□□ -0.49
CLN6-218ENST00000637223 A8MWV9 139 aa12.01□□□□□ -0.49
CLN6-218ENST00000637223 PAX4O43316 350 aa12.01□□□□□ -0.49
CLN6-218ENST00000637223 CRYBA4P53673 196 aa12.01□□□□□ -0.49
CLN6-218ENST00000637223 SAMD10Q9BYL1 202 aa12.01□□□□□ -0.49
CLN6-218ENST00000637223 PRO0255Q9UI72 69 aa12.01□□□□□ -0.49
CLN6-218ENST00000637223 V9GYV3 84 aa12.01□□□□□ -0.49
CLN6-218ENST00000637223 TRBV24-1A0A075B6N3 115 aa12□□□□□ -0.49
CLN6-218ENST00000637223 NXPH4O95158 308 aa12□□□□□ -0.49
CLN6-218ENST00000637223 SLAQ13239 276 aa12□□□□□ -0.49
CLN6-218ENST00000637223 LINC00476Q8WZB0 136 aa12□□□□□ -0.49
CLN6-218ENST00000637223 YPEL4Q96NS1 127 aa12□□□□□ -0.49
CLN6-218ENST00000637223 MUC4Q99102 2169 aa11.99□□□□□ -0.49
CLN6-218ENST00000637223 A0A087WWL8 130 aa11.99□□□□□ -0.49
CLN6-218ENST00000637223 LY6G6CO95867 125 aa11.99□□□□□ -0.49
CLN6-218ENST00000637223 GATA1P15976 413 aaPredicted RBP11.99□□□□□ -0.49
CLN6-218ENST00000637223 FAM74A4Q5TZK3 123 aa11.99□□□□□ -0.49
CLN6-218ENST00000637223 LYZL1Q6UWQ5 148 aa11.99□□□□□ -0.49
CLN6-218ENST00000637223 GFRA4Q9GZZ7 299 aa11.99□□□□□ -0.49
CLN6-218ENST00000637223 A0A1W2PPQ1 181 aa11.98□□□□□ -0.49
CLN6-218ENST00000637223 COLCA2A8K830 154 aa11.98□□□□□ -0.49
CLN6-218ENST00000637223 ELOBQ15370 118 aa11.98□□□□□ -0.49
CLN6-218ENST00000637223 GTSF1Q8WW33 167 aa11.98□□□□□ -0.49
CLN6-218ENST00000637223 HERC2O95714 4834 aa11.98□□□□□ -0.49
CLN6-218ENST00000637223 PCLOQ9Y6V0 5065 aa11.97□□□□□ -0.49
CLN6-218ENST00000637223 A8MWL6 223 aa11.97□□□□□ -0.49
CLN6-218ENST00000637223 F2Z2F3 143 aa11.97□□□□□ -0.49
CLN6-218ENST00000637223 H3BNG1 76 aa11.97□□□□□ -0.49
CLN6-218ENST00000637223 CIDEAO60543 219 aa11.97□□□□□ -0.49
CLN6-218ENST00000637223 CTRLP40313 264 aa11.97□□□□□ -0.49
CLN6-218ENST00000637223 LGALS9CQ6DKI2 356 aa11.97□□□□□ -0.49
CLN6-218ENST00000637223 UFSP1Q6NVU6 142 aa11.97□□□□□ -0.49
CLN6-218ENST00000637223 ZFP2Q6ZN57 461 aa11.97□□□□□ -0.49
CLN6-218ENST00000637223 Q6ZSN1 163 aa11.97□□□□□ -0.49
CLN6-218ENST00000637223 LOC100131303A0A0U1RQF7 123 aa11.96□□□□□ -0.49
CLN6-218ENST00000637223 SMIM27A0A1W2PRY6 76 aa11.96□□□□□ -0.49
CLN6-218ENST00000637223 RHODO00212 210 aa11.96□□□□□ -0.49
CLN6-218ENST00000637223 CRYGDP07320 174 aa11.96□□□□□ -0.49
CLN6-218ENST00000637223 GYPEP15421 78 aa11.96□□□□□ -0.49
CLN6-218ENST00000637223 CACNG7P62955 275 aa11.96□□□□□ -0.49
CLN6-218ENST00000637223 SLC25A29Q8N8R3 303 aa11.96□□□□□ -0.49
CLN6-218ENST00000637223 TSKUQ8WUA8 353 aa11.96□□□□□ -0.49
CLN6-218ENST00000637223 MSRB1Q9NZV6 116 aa11.96□□□□□ -0.49
CLN6-218ENST00000637223 A0A096LPF7 62 aa11.95□□□□□ -0.5
CLN6-218ENST00000637223 P0DMU3 169 aa11.95□□□□□ -0.5
CLN6-218ENST00000637223 FAM231AP0DMU4 169 aa11.95□□□□□ -0.5
CLN6-218ENST00000637223 FAM231CP0DMU5 169 aa11.95□□□□□ -0.5
CLN6-218ENST00000637223 COX19Q49B96 90 aa11.95□□□□□ -0.5
CLN6-218ENST00000637223 C14orf178Q8N769 122 aaPredicted RBP11.95□□□□□ -0.5
CLN6-218ENST00000637223 PGLYRP4Q96LB8 373 aa11.95□□□□□ -0.5
CLN6-218ENST00000637223 ICOSQ9Y6W8 199 aa11.95□□□□□ -0.5
CLN6-218ENST00000637223 FOXA3P55318 350 aaPredicted RBP11.94□□□□□ -0.5
CLN6-218ENST00000637223 UBE2DNLQ8IWF7 75 aa11.94□□□□□ -0.5
CLN6-218ENST00000637223 AP1S3Q96PC3 154 aa11.94□□□□□ -0.5
CLN6-218ENST00000637223 NAT8BQ9UHF3 227 aa11.94□□□□□ -0.5
CLN6-218ENST00000637223 TRBV6-4A0A1B0GX49 114 aa11.93□□□□□ -0.5
CLN6-218ENST00000637223 K7EQD1 137 aa11.93□□□□□ -0.5
CLN6-218ENST00000637223 RAB5AP20339 215 aa11.93□□□□□ -0.5
CLN6-218ENST00000637223 NTF3P20783 257 aa11.93□□□□□ -0.5
CLN6-218ENST00000637223 RHOHQ15669 191 aa11.93□□□□□ -0.5
CLN6-218ENST00000637223 RASL11AQ6T310 242 aa11.93□□□□□ -0.5
CLN6-218ENST00000637223 PRADC1Q9BSG0 188 aa11.93□□□□□ -0.5
CLN6-218ENST00000637223 HIGD1CA8MV81 97 aa11.92□□□□□ -0.5
CLN6-218ENST00000637223 SMIM17P0DL12 118 aa11.92□□□□□ -0.5
CLN6-218ENST00000637223 TWIST1Q15672 202 aa11.92□□□□□ -0.5
CLN6-218ENST00000637223 ZNF56Q15929 161 aa11.92□□□□□ -0.5
CLN6-218ENST00000637223 MRPL23Q16540 153 aaKnown RBP11.92□□□□□ -0.5
CLN6-218ENST00000637223 WDR73Q6P4I2 378 aa11.92□□□□□ -0.5
CLN6-218ENST00000637223 CNFNQ9BYD5 112 aa11.92□□□□□ -0.5
CLN6-218ENST00000637223 URGCP-MRPS24S4R325 110 aa11.92□□□□□ -0.5
CLN6-218ENST00000637223 VPS13DQ5THJ4 4388 aa11.92□□□□□ -0.5
CLN6-218ENST00000637223 SRIP30626 198 aa11.91□□□□□ -0.5
CLN6-218ENST00000637223 FAM3BP58499 235 aaPredicted RBP11.91□□□□□ -0.5
CLN6-218ENST00000637223 ATP5L2Q7Z4Y8 100 aa11.91□□□□□ -0.5
CLN6-218ENST00000637223 KIF25-AS1Q9Y6Z4 181 aa11.91□□□□□ -0.5
CLN6-218ENST00000637223 MGPP08493 103 aa11.9□□□□□ -0.5
CLN6-218ENST00000637223 TRGC1P0CF51 173 aa11.9□□□□□ -0.5
CLN6-218ENST00000637223 EVI2AP22794 236 aa11.9□□□□□ -0.5
CLN6-218ENST00000637223 CCL18P55774 89 aa11.9□□□□□ -0.5
CLN6-218ENST00000637223 ESRGQ1W209 222 aa11.9□□□□□ -0.5
CLN6-218ENST00000637223 Q9UF83 564 aa11.9□□□□□ -0.5
CLN6-218ENST00000637223 LINC00588Q9Y4M8 146 aa11.9□□□□□ -0.5
CLN6-218ENST00000637223 TGIF2-C20orf24A0A0A6YYL0 155 aa11.89□□□□□ -0.51
CLN6-218ENST00000637223 GAGE12JA6NER3 117 aa11.89□□□□□ -0.51
CLN6-218ENST00000637223 F5H697 171 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms