RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 SHANK1Q9Y566 2161 aa10.27□□□□□ -0.77
RAB11FIP4-210ENST00000585058 UBE2AP49459 152 aa10.27□□□□□ -0.77
RAB11FIP4-210ENST00000585058 LINC01620Q4KN68 170 aa10.27□□□□□ -0.77
RAB11FIP4-210ENST00000585058 PRAC2D3DTV9 90 aa10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 F8W735 103 aaPredicted RBP10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 FXYD2P54710 66 aa10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 EML6Q6ZMW3 1958 aa10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 PCNX1Q96RV3 2341 aa10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 DEFB113Q30KQ7 82 aa10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 C9orf47Q6ZRZ4 202 aa10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 Q8NFD4 153 aa10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 IGHV4OR15-8A0A075B7B6 117 aa10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 A0A087WW49 117 aa10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 PLCE1Q9P212 2302 aa10.26□□□□□ -0.77
RAB11FIP4-210ENST00000585058 MALRD1Q5VYJ5 2156 aa10.25□□□□□ -0.77
RAB11FIP4-210ENST00000585058 KMT2EQ8IZD2 1858 aa10.25□□□□□ -0.77
RAB11FIP4-210ENST00000585058 NDUFA1O15239 70 aa10.25□□□□□ -0.77
RAB11FIP4-210ENST00000585058 SEM1Q6ZVN7 128 aa10.25□□□□□ -0.77
RAB11FIP4-210ENST00000585058 ATOX1O00244 68 aa10.25□□□□□ -0.77
RAB11FIP4-210ENST00000585058 LECT2O14960 151 aa10.25□□□□□ -0.77
RAB11FIP4-210ENST00000585058 TMEM61Q8N0U2 210 aa10.25□□□□□ -0.77
RAB11FIP4-210ENST00000585058 GTSF1Q8WW33 167 aa10.25□□□□□ -0.77
RAB11FIP4-210ENST00000585058 HHLA3Q9XRX5 114 aa10.25□□□□□ -0.77
RAB11FIP4-210ENST00000585058 WFDC2Q14508 124 aa10.25□□□□□ -0.77
RAB11FIP4-210ENST00000585058 SMIM20Q8N5G0 67 aa10.25□□□□□ -0.77
RAB11FIP4-210ENST00000585058 DEFB4AO15263 64 aa10.24□□□□□ -0.77
RAB11FIP4-210ENST00000585058 TRBV7-3A0A075B6L6 115 aa10.24□□□□□ -0.77
RAB11FIP4-210ENST00000585058 SLX1AQ9BQ83 275 aa10.24□□□□□ -0.77
RAB11FIP4-210ENST00000585058 GTF3C1Q12789 2109 aa10.24□□□□□ -0.77
RAB11FIP4-210ENST00000585058 TEN1Q86WV5 123 aa10.24□□□□□ -0.77
RAB11FIP4-210ENST00000585058 CLEC2BQ92478 149 aa10.24□□□□□ -0.77
RAB11FIP4-210ENST00000585058 HELZP42694 1942 aaKnown RBP10.24□□□□□ -0.77
RAB11FIP4-210ENST00000585058 WT1P19544 449 aaPredicted RBP10.23□□□□□ -0.77
RAB11FIP4-210ENST00000585058 LGALS9O00182 355 aa10.23□□□□□ -0.77
RAB11FIP4-210ENST00000585058 EP400Q96L91 3159 aa10.23□□□□□ -0.77
RAB11FIP4-210ENST00000585058 DEFB1P60022 68 aa10.23□□□□□ -0.77
RAB11FIP4-210ENST00000585058 COA6Q5JTJ3 125 aaKnown RBP10.23□□□□□ -0.77
RAB11FIP4-210ENST00000585058 Q8N9W7 124 aa10.23□□□□□ -0.77
RAB11FIP4-210ENST00000585058 C5orf56Q8N8D9 126 aa10.23□□□□□ -0.77
RAB11FIP4-210ENST00000585058 TOMM6Q96B49 74 aa10.22□□□□□ -0.77
RAB11FIP4-210ENST00000585058 MED13LQ71F56 2210 aa10.22□□□□□ -0.77
RAB11FIP4-210ENST00000585058 C2orf70A6NJV1 201 aa10.22□□□□□ -0.77
RAB11FIP4-210ENST00000585058 NRGNQ92686 78 aa10.22□□□□□ -0.77
RAB11FIP4-210ENST00000585058 ANAPC1Q9H1A4 1944 aa10.22□□□□□ -0.77
RAB11FIP4-210ENST00000585058 CHD3Q12873 2000 aaKnown RBP10.22□□□□□ -0.77
RAB11FIP4-210ENST00000585058 PIP4P1Q86T03 277 aa10.21□□□□□ -0.77
RAB11FIP4-210ENST00000585058 DEFB135Q30KP9 77 aa10.21□□□□□ -0.77
RAB11FIP4-210ENST00000585058 NACAE9PAV3 2078 aa10.21□□□□□ -0.78
RAB11FIP4-210ENST00000585058 SPAG11BQ08648 103 aa10.21□□□□□ -0.78
RAB11FIP4-210ENST00000585058 WI2-2373I1.2A0A1W2PRP0 233 aa10.21□□□□□ -0.78
RAB11FIP4-210ENST00000585058 FAM167A-AS1Q96KT0 104 aa10.21□□□□□ -0.78
RAB11FIP4-210ENST00000585058 NDUFC2O95298 119 aa10.2□□□□□ -0.78
RAB11FIP4-210ENST00000585058 SPATA25Q9BR10 227 aa10.2□□□□□ -0.78
RAB11FIP4-210ENST00000585058 KLK12Q9UKR0 248 aa10.2□□□□□ -0.78
RAB11FIP4-210ENST00000585058 HIGD2BQ4VC39 106 aa10.2□□□□□ -0.78
RAB11FIP4-210ENST00000585058 DIRC1Q969H9 104 aa10.2□□□□□ -0.78
RAB11FIP4-210ENST00000585058 MIR7-3HGQ8N6C7 128 aa10.2□□□□□ -0.78
RAB11FIP4-210ENST00000585058 PLA2G2EQ9NZK7 142 aa10.2□□□□□ -0.78
RAB11FIP4-210ENST00000585058 C11orf86A6NJI1 115 aa10.2□□□□□ -0.78
RAB11FIP4-210ENST00000585058 E9PLD3 99 aa10.19□□□□□ -0.78
RAB11FIP4-210ENST00000585058 JMJD7-PLA2G4BH0Y9G9 81 aa10.19□□□□□ -0.78
RAB11FIP4-210ENST00000585058 H3BQ85 93 aa10.19□□□□□ -0.78
RAB11FIP4-210ENST00000585058 PROP1O75360 226 aa10.19□□□□□ -0.78
RAB11FIP4-210ENST00000585058 C4orf48Q5BLP8 95 aa10.19□□□□□ -0.78
RAB11FIP4-210ENST00000585058 ZGRF1Q86YA3 2104 aa10.19□□□□□ -0.78
RAB11FIP4-210ENST00000585058 FOXI1Q12951 378 aa10.19□□□□□ -0.78
RAB11FIP4-210ENST00000585058 FANCD2OSQ96PS1 177 aa10.19□□□□□ -0.78
RAB11FIP4-210ENST00000585058 CRYGBP07316 175 aa10.18□□□□□ -0.78
RAB11FIP4-210ENST00000585058 HIGD1BQ9P298 99 aa10.18□□□□□ -0.78
RAB11FIP4-210ENST00000585058 TRBV10-2A0A0K0K1G8 114 aa10.18□□□□□ -0.78
RAB11FIP4-210ENST00000585058 TEX22C9J3V5 150 aa10.18□□□□□ -0.78
RAB11FIP4-210ENST00000585058 C10orf105Q8TEF2 133 aa10.18□□□□□ -0.78
RAB11FIP4-210ENST00000585058 TM2D2Q9BX73 214 aa10.18□□□□□ -0.78
RAB11FIP4-210ENST00000585058 MED13Q9UHV7 2174 aa10.18□□□□□ -0.78
RAB11FIP4-210ENST00000585058 H0Y9J4 135 aa10.18□□□□□ -0.78
RAB11FIP4-210ENST00000585058 WFDC11Q8NEX6 87 aa10.17□□□□□ -0.78
RAB11FIP4-210ENST00000585058 TAX1BP3O14907 124 aa10.17□□□□□ -0.78
RAB11FIP4-210ENST00000585058 J3KT08 172 aa10.17□□□□□ -0.78
RAB11FIP4-210ENST00000585058 CXCL5P42830 114 aa10.17□□□□□ -0.78
RAB11FIP4-210ENST00000585058 KRTAP27-1Q3LI81 207 aa10.17□□□□□ -0.78
RAB11FIP4-210ENST00000585058 KIAA1671Q9BY89 1806 aa10.17□□□□□ -0.78
RAB11FIP4-210ENST00000585058 MDFICQ9P1T7 246 aa10.17□□□□□ -0.78
RAB11FIP4-210ENST00000585058 RNASE8Q8TDE3 154 aaKnown RBP10.17□□□□□ -0.78
RAB11FIP4-210ENST00000585058 IGKV2D-26A0A0A0MRZ7 120 aa10.16□□□□□ -0.78
RAB11FIP4-210ENST00000585058 CTRLP40313 264 aa10.16□□□□□ -0.78
RAB11FIP4-210ENST00000585058 SVIPQ8NHG7 77 aa10.16□□□□□ -0.78
RAB11FIP4-210ENST00000585058 PCNX2A6NKB5 2137 aa10.16□□□□□ -0.78
RAB11FIP4-210ENST00000585058 ZFP36P26651 326 aaKnown RBP10.16□□□□□ -0.78
RAB11FIP4-210ENST00000585058 FRMD6-AS1P0C7T7 363 aa10.16□□□□□ -0.78
RAB11FIP4-210ENST00000585058 E7EUB6 86 aa10.16□□□□□ -0.78
RAB11FIP4-210ENST00000585058 IGHV1-58A0A0C4DH39 117 aa10.15□□□□□ -0.78
RAB11FIP4-210ENST00000585058 K7EMT4 169 aa10.15□□□□□ -0.78
RAB11FIP4-210ENST00000585058 ODF1Q14990 250 aa10.15□□□□□ -0.78
RAB11FIP4-210ENST00000585058 PLXNA2O75051 1894 aa10.15□□□□□ -0.78
RAB11FIP4-210ENST00000585058 TRBV12-3P01733 135 aa10.15□□□□□ -0.78
RAB11FIP4-210ENST00000585058 CEMP1Q6PRD7 247 aaPredicted RBP10.15□□□□□ -0.78
RAB11FIP4-210ENST00000585058 RNF183Q96D59 192 aa10.15□□□□□ -0.78
RAB11FIP4-210ENST00000585058 PLXND1Q9Y4D7 1925 aa10.15□□□□□ -0.79
RAB11FIP4-210ENST00000585058 TMEM256-PLSCR3K7ERE1 68 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms