RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 ARL14EPLP0DKL9 152 aa6.81□□□□□ -1.32
CTDSPL2-203ENST00000558791 CDC34P49427 236 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-203ENST00000558791 RPL36AP83881 106 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-203ENST00000558791 LINC00299Q6ZSB3 139 aa6.81□□□□□ -1.32
CTDSPL2-203ENST00000558791 C14orf178Q8N769 122 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-203ENST00000558791 C9orf163Q8N9P6 203 aa6.81□□□□□ -1.32
CTDSPL2-203ENST00000558791 RPL36ALQ969Q0 106 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-203ENST00000558791 TMEM167BQ9NRX6 74 aa6.81□□□□□ -1.32
CTDSPL2-203ENST00000558791 IGKV3D-20A0A0C4DH25 116 aa6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 MBP02144 154 aa6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 RAB2AP61019 212 aa6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 SUMO1P63165 101 aaKnown RBP6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 RPL19P84098 196 aaKnown RBP6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 MIAQ16674 131 aa6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 PRNTQ86SH4 94 aa6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 HSD17B11Q8NBQ5 300 aa6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 OR11H4Q8NGC9 324 aa6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 KRTAP9-2Q9BYQ4 174 aa6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 Q9UF83 564 aa6.8□□□□□ -1.32
CTDSPL2-203ENST00000558791 TRBV7-3A0A075B6L6 115 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 B4DEV8 164 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 GCHFRP30047 84 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 H2BFSP57053 126 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 UBE2D3P61077 147 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 UBE2D2P62837 147 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 ENKURQ8TC29 256 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 ZC2HC1AQ96GY0 325 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 SFRP2Q96HF1 295 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 DNAJC30Q96LL9 226 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 SMIM3Q9BZL3 60 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 JPT2Q9H910 190 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 NDUFA13Q9P0J0 144 aa6.79□□□□□ -1.32
CTDSPL2-203ENST00000558791 A0A1W2PRE2 83 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 USP17L23D6RBM5 183 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 TMEM262E9PQX1 116 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 HMGB3O15347 200 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 EIF3GO75821 320 aaKnown RBP eCLIP6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 CXorf1O96002 111 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 ARMS2P0C7Q2 107 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 HNRNPA3P51991 378 aaKnown RBP6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 SERF2P84101 59 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 TMEM97Q5BJF2 176 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 FAM74A4Q5TZK3 123 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 ENHOQ6UWT2 76 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 CLRN3Q8NCR9 226 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 OR10G8Q8NGN5 311 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 RAB24Q969Q5 203 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 RNF185Q96GF1 192 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 PSMG3Q9BT73 122 aaPredicted RBP6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 PHLDA3Q9Y5J5 127 aa6.78□□□□□ -1.32
CTDSPL2-203ENST00000558791 TRBV6-8A0A0A6YYG3 113 aa6.77□□□□□ -1.33
CTDSPL2-203ENST00000558791 H3BVH4 76 aa6.77□□□□□ -1.33
CTDSPL2-203ENST00000558791 TPT1P13693 172 aaKnown RBP6.77□□□□□ -1.33
CTDSPL2-203ENST00000558791 COX8CQ7Z4L0 72 aa6.77□□□□□ -1.33
CTDSPL2-203ENST00000558791 S100ZQ8WXG8 99 aa6.77□□□□□ -1.33
CTDSPL2-203ENST00000558791 NKX6-2Q9C056 277 aaPredicted RBP6.77□□□□□ -1.33
CTDSPL2-203ENST00000558791 ARL2-SNX15V9GYD0 113 aa6.77□□□□□ -1.33
CTDSPL2-203ENST00000558791 KRTAP9-6A0A140TA67 174 aa6.76□□□□□ -1.33
CTDSPL2-203ENST00000558791 KRBOX1C9JBD0 128 aa6.76□□□□□ -1.33
CTDSPL2-203ENST00000558791 INMT-MINDY4F8WBC2 141 aa6.76□□□□□ -1.33
CTDSPL2-203ENST00000558791 ANGP03950 147 aaKnown RBP6.76□□□□□ -1.33
CTDSPL2-203ENST00000558791 PRSS1P07477 247 aa6.76□□□□□ -1.33
CTDSPL2-203ENST00000558791 CIRBPQ14011 172 aaKnown RBP6.76□□□□□ -1.33
CTDSPL2-203ENST00000558791 SDIM1Q6ZPB5 146 aa6.76□□□□□ -1.33
CTDSPL2-203ENST00000558791 ZFP82Q8N141 532 aa6.76□□□□□ -1.33
CTDSPL2-203ENST00000558791 C15orf54Q8N8G6 183 aa6.76□□□□□ -1.33
CTDSPL2-203ENST00000558791 WFDC1Q9HC57 220 aa6.76□□□□□ -1.33
CTDSPL2-203ENST00000558791 ZFP30Q9Y2G7 519 aa6.76□□□□□ -1.33
CTDSPL2-203ENST00000558791 A0A087WWL8 130 aa6.75□□□□□ -1.33
CTDSPL2-203ENST00000558791 HLA-DQA1P01909 254 aa6.75□□□□□ -1.33
CTDSPL2-203ENST00000558791 RAB4BP61018 213 aa6.75□□□□□ -1.33
CTDSPL2-203ENST00000558791 LRP2P98164 4655 aa6.75□□□□□ -1.33
CTDSPL2-203ENST00000558791 HIST1H2BAQ96A08 127 aa6.75□□□□□ -1.33
CTDSPL2-203ENST00000558791 MARVELD1Q9BSK0 173 aa6.75□□□□□ -1.33
CTDSPL2-203ENST00000558791 ACTR3CQ9C0K3 210 aaPredicted RBP6.75□□□□□ -1.33
CTDSPL2-203ENST00000558791 PRR34Q9NV39 138 aa6.75□□□□□ -1.33
CTDSPL2-203ENST00000558791 TNFSF18Q9UNG2 199 aa6.75□□□□□ -1.33
CTDSPL2-203ENST00000558791 TNXBP22105 4242 aa6.74□□□□□ -1.33
CTDSPL2-203ENST00000558791 SSNA1O43805 119 aa6.74□□□□□ -1.33
CTDSPL2-203ENST00000558791 IFNA7P01567 189 aa6.74□□□□□ -1.33
CTDSPL2-203ENST00000558791 CNBPP62633 177 aaKnown RBP6.74□□□□□ -1.33
CTDSPL2-203ENST00000558791 MPV17L2Q567V2 206 aa6.74□□□□□ -1.33
CTDSPL2-203ENST00000558791 FAM162BQ5T6X4 162 aa6.74□□□□□ -1.33
CTDSPL2-203ENST00000558791 Q86TA4 180 aa6.74□□□□□ -1.33
CTDSPL2-203ENST00000558791 DPH3P1Q9H4G8 78 aa6.74□□□□□ -1.33
CTDSPL2-203ENST00000558791 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.74□□□□□ -1.33
CTDSPL2-203ENST00000558791 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.73□□□□□ -1.33
CTDSPL2-203ENST00000558791 TRAV34A0A0B4J273 112 aa6.73□□□□□ -1.33
CTDSPL2-203ENST00000558791 M0R381 172 aa6.73□□□□□ -1.33
CTDSPL2-203ENST00000558791 PEX7O00628 323 aa6.73□□□□□ -1.33
CTDSPL2-203ENST00000558791 PTTG1O95997 202 aa6.73□□□□□ -1.33
CTDSPL2-203ENST00000558791 ATP6V0CP27449 155 aa6.73□□□□□ -1.33
CTDSPL2-203ENST00000558791 PRR27Q6MZM9 219 aa6.73□□□□□ -1.33
CTDSPL2-203ENST00000558791 CHCHD5Q9BSY4 110 aa6.73□□□□□ -1.33
CTDSPL2-203ENST00000558791 RNF213Q63HN8 5207 aa6.73□□□□□ -1.33
CTDSPL2-203ENST00000558791 IGHV3-64A0A075B6Q5 118 aa6.72□□□□□ -1.33
CTDSPL2-203ENST00000558791 TRAV8-4A0A0B4J246 113 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms