RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 RBM3P98179 157 aaKnown RBP1.91□□□□□ -2.1
VRK1-205ENST00000555402 CSAG1Q6PB30 78 aa1.91□□□□□ -2.1
VRK1-205ENST00000555402 LINC00299Q6ZSB3 139 aa1.91□□□□□ -2.1
VRK1-205ENST00000555402 NWD2Q9ULI1 1742 aa1.91□□□□□ -2.1
VRK1-205ENST00000555402 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.1
VRK1-205ENST00000555402 FYCO1Q9BQS8 1478 aa1.9□□□□□ -2.11
VRK1-205ENST00000555402 CITO14578 2027 aa1.9□□□□□ -2.11
VRK1-205ENST00000555402 PTPRDP23468 1912 aa1.9□□□□□ -2.11
VRK1-205ENST00000555402 IGKV3D-7A0A0C4DH55 119 aa1.9□□□□□ -2.11
VRK1-205ENST00000555402 IGKV3OR2-268A0A0C4DH90 116 aa1.9□□□□□ -2.11
VRK1-205ENST00000555402 TMEM262E9PQX1 116 aa1.9□□□□□ -2.11
VRK1-205ENST00000555402 ATP5EP56381 51 aaPredicted RBP1.9□□□□□ -2.11
VRK1-205ENST00000555402 UBE2G1P62253 170 aa1.9□□□□□ -2.11
VRK1-205ENST00000555402 LYPD5Q6UWN5 251 aa1.9□□□□□ -2.11
VRK1-205ENST00000555402 KIAA1551Q9HCM1 1747 aa1.9□□□□□ -2.11
VRK1-205ENST00000555402 ZNF142P52746 1687 aaPredicted RBP1.9□□□□□ -2.11
VRK1-205ENST00000555402 BAZ2BQ9UIF8 2168 aaKnown RBP1.89□□□□□ -2.11
VRK1-205ENST00000555402 ADGRL2O95490 1459 aa1.89□□□□□ -2.11
VRK1-205ENST00000555402 TRBV10-1A0A0K0K1A3 114 aa1.89□□□□□ -2.11
VRK1-205ENST00000555402 CXorf51AA0A1B0GTR3 108 aa1.89□□□□□ -2.11
VRK1-205ENST00000555402 A6NIN4 97 aa1.89□□□□□ -2.11
VRK1-205ENST00000555402 JMJD7-PLA2G4BH0Y9G9 81 aa1.89□□□□□ -2.11
VRK1-205ENST00000555402 MRPS14O60783 128 aaKnown RBP1.89□□□□□ -2.11
VRK1-205ENST00000555402 DNAL4O96015 105 aa1.89□□□□□ -2.11
VRK1-205ENST00000555402 CBLN1P23435 193 aa1.89□□□□□ -2.11
VRK1-205ENST00000555402 C9orf116Q5BN46 136 aaPredicted RBP1.89□□□□□ -2.11
VRK1-205ENST00000555402 Q6ZSA8 131 aa1.89□□□□□ -2.11
VRK1-205ENST00000555402 C5orf38Q86SI9 138 aa1.89□□□□□ -2.11
VRK1-205ENST00000555402 Q9H521 79 aa1.89□□□□□ -2.11
VRK1-205ENST00000555402 CTTNBP2Q8WZ74 1663 aa1.89□□□□□ -2.11
VRK1-205ENST00000555402 ARAP2Q8WZ64 1704 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 IFT140Q96RY7 1462 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 TRBV10-3A0A0K0K1G6 114 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 UBE2L5PA0A1B0GUS4 154 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 NUPR2A6NF83 97 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 UBE2L3P68036 154 aaKnown RBP1.88□□□□□ -2.11
VRK1-205ENST00000555402 MPV17LQ2QL34 196 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 KRTAP21-3Q3LHN1 58 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 SPRNQ5BIV9 151 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 SBSPONQ8IVN8 264 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 C15orf53Q8NAA6 179 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 SPTSSBQ8NFR3 76 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 C10orf82Q8WW14 230 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 DMAC1Q96GE9 116 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 CYSTM1Q9H1C7 97 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 ATG5Q9H1Y0 275 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 MED9Q9NWA0 146 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 C22orf24Q9Y442 160 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 AP4S1Q9Y587 144 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 C10orf71Q711Q0 1435 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 NSD3Q9BZ95 1437 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 FREM3P0C091 2139 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 HEATR1Q9H583 2144 aaKnown RBP1.88□□□□□ -2.11
VRK1-205ENST00000555402 TNS1Q9HBL0 1735 aaKnown RBP1.88□□□□□ -2.11
VRK1-205ENST00000555402 BRWD1Q9NSI6 2320 aa1.88□□□□□ -2.11
VRK1-205ENST00000555402 DIDO1Q9BTC0 2240 aaKnown RBP1.87□□□□□ -2.11
VRK1-205ENST00000555402 TET3O43151 1660 aa1.87□□□□□ -2.11
VRK1-205ENST00000555402 IGKV2-40A0A087WW87 121 aaPredicted RBP1.87□□□□□ -2.11
VRK1-205ENST00000555402 RBAKDNA6NC62 111 aa1.87□□□□□ -2.11
VRK1-205ENST00000555402 CHD1O14646 1710 aa1.87□□□□□ -2.11
VRK1-205ENST00000555402 NUPR1O60356 82 aa1.87□□□□□ -2.11
VRK1-205ENST00000555402 IGKV2D-40P01614 121 aaPredicted RBP1.87□□□□□ -2.11
VRK1-205ENST00000555402 RP1P56715 2156 aa1.87□□□□□ -2.11
VRK1-205ENST00000555402 UBA52P62987 128 aaKnown RBP1.87□□□□□ -2.11
VRK1-205ENST00000555402 DOCK1Q14185 1865 aa1.87□□□□□ -2.11
VRK1-205ENST00000555402 ODF3Q96PU9 254 aa1.87□□□□□ -2.11
VRK1-205ENST00000555402 MRPL35Q9NZE8 188 aaKnown RBP1.87□□□□□ -2.11
VRK1-205ENST00000555402 MRPL36Q9P0J6 103 aaKnown RBP1.87□□□□□ -2.11
VRK1-205ENST00000555402 TEX14Q8IWB6 1497 aa1.87□□□□□ -2.11
VRK1-205ENST00000555402 PATJQ8NI35 1801 aa1.87□□□□□ -2.11
VRK1-205ENST00000555402 SDK1Q7Z5N4 2213 aa1.86□□□□□ -2.11
VRK1-205ENST00000555402 TRAV12-3A0A0B4J271 114 aa1.86□□□□□ -2.11
VRK1-205ENST00000555402 A0A0J9YY99 117 aa1.86□□□□□ -2.11
VRK1-205ENST00000555402 SNCAP37840 140 aa1.86□□□□□ -2.11
VRK1-205ENST00000555402 DCDP81605 110 aaKnown RBP1.86□□□□□ -2.11
VRK1-205ENST00000555402 UNQ6190/PRO20217Q6UXQ8 127 aa1.86□□□□□ -2.11
VRK1-205ENST00000555402 COMMD6Q7Z4G1 85 aa1.86□□□□□ -2.11
VRK1-205ENST00000555402 IFI27L1Q96BM0 104 aa1.86□□□□□ -2.11
VRK1-205ENST00000555402 WFDC10AQ9H1F0 79 aa1.86□□□□□ -2.11
VRK1-205ENST00000555402 DPH3P1Q9H4G8 78 aa1.86□□□□□ -2.11
VRK1-205ENST00000555402 V9GYS6 101 aa1.86□□□□□ -2.11
VRK1-205ENST00000555402 GAPVD1Q14C86 1478 aa1.86□□□□□ -2.11
VRK1-205ENST00000555402 SCAPERQ9BY12 1400 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 KDM6BO15054 1643 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 IGKV3-7A0A075B6H7 116 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 TRAV23DV6A0A075B6W5 121 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 TRAV13-2A0A0B4J235 113 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 SSSCA1O60232 199 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 IGLV3-1P01715 115 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 NDUFA11Q86Y39 141 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 C9orf62Q8N4C0 152 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 VAMP8Q9BV40 100 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 DPY30Q9C005 99 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 TMEM14CQ9P0S9 112 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 MED12LQ86YW9 2145 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 MYH8P13535 1937 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 TNRC6AQ8NDV7 1962 aaKnown RBP1.85□□□□□ -2.11
VRK1-205ENST00000555402 LAMC3Q9Y6N6 1575 aa1.85□□□□□ -2.11
VRK1-205ENST00000555402 PHRF1Q9P1Y6 1649 aaKnown RBP1.84□□□□□ -2.11
VRK1-205ENST00000555402 CASKIN1Q8WXD9 1431 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms