RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 H3BSH0 61 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 BUB1B-PAK6H3BSN5 160 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 SDCBPO00560 298 aaPredicted RBP2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 DHFRP00374 187 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 APOA2P02652 100 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 IFNA6P05013 189 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 PSMB8P28062 276 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 FAUP35544 74 aaKnown RBP2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 AP3S2P59780 193 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 TMEM258P61165 79 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 UBA52P62987 128 aaKnown RBP2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 MSMO1Q15800 293 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 NEDD8Q15843 81 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 RTL8BQ17RB0 113 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 TPRXLQ17RH7 258 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 FAM201AQ5SY85 155 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 HACD4Q5VWC8 232 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 SFXN4Q6P4A7 337 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 TMEM91Q6ZNR0 172 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 LINC00299Q6ZSB3 139 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 FAM216BQ8N7L0 139 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 OR4S1Q8NGB4 309 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 OR51D1Q8NGF3 324 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 OR2T10Q8NGZ9 312 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 VSTM2AQ8TAG5 236 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 DGCR14Q96DF8 476 aaKnown RBP2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 SMR3AQ99954 134 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 TIMM21Q9BVV7 248 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 TAF9BQ9HBM6 251 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 XAGE1AQ9HD64 81 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 FKBP11Q9NYL4 201 aa2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 RSL24D1Q9UHA3 163 aaKnown RBP2.08□□□□□ -2.08
CKS1BP1-201ENST00000555221 TENM3Q9P273 2699 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 CCDC160A6NGH7 325 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 FAM25AB3EWG3 89 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 FAM25CB3EWG5 89 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 FAM25GB3EWG6 89 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 HMGB3O15347 200 aaKnown RBP2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 PIN1P1O15428 100 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 TGOLN2O43493 480 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 NAPSAO96009 420 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 HIST1H1DP16402 221 aaKnown RBP2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 REG1BP48304 166 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 ZNF137PP52743 207 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 POLR2GP62487 172 aaKnown RBP eCLIP2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 RPS25P62851 125 aaKnown RBP2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 RPL30P62888 115 aaKnown RBP2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 CATR1Q13166 79 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 PLGLAQ15195 96 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 DEFB112Q30KQ8 113 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 PIGYQ3MUY2 71 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 MORN2Q502X0 79 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 SPRNQ5BIV9 151 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 XAF1Q6GPH4 301 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 SIGLECL1Q8N7X8 197 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 OR10K1Q8NGX5 313 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 OR10AC1Q8NH08 325 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 OR4K15Q8NH41 348 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 TSC22D3Q99576 134 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 BANF2Q9H503 90 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 BATF3Q9NR55 127 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 C19orf12Q9NSK7 152 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 SCP2D1Q9UJQ7 156 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 TIMM9Q9Y5J7 89 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 HILPDAQ9Y5L2 63 aa2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 PRKDCP78527 4128 aaKnown RBP2.07□□□□□ -2.08
CKS1BP1-201ENST00000555221 TRBV6-7A0A0A0MS04 114 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 A0A1B0GV50 99 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 H3BUX3 64 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 PLA2G10O15496 165 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 SNAPC5O75971 98 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 CNIH1O95406 144 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 CCL3L1P16619 93 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 S100A7P31151 101 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 ETV6P41212 452 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 RAB5BP61020 215 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 QRFPP83859 136 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 CDK10Q15131 360 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 VMA21Q3ZAQ7 101 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 C6orf201Q7Z4U5 140 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 OR1L8Q8NGR8 309 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 ARHGAP5-AS1Q96IT6 56 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 IMMP2LQ96T52 175 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 PRRT1Q99946 306 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 LPAR5Q9H1C0 372 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 COMMD3Q9UBI1 195 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 LSM5Q9Y4Y9 91 aaKnown RBP2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 HERC1Q15751 4861 aa2.06□□□□□ -2.08
CKS1BP1-201ENST00000555221 KIAA2026Q5HYC2 2103 aa2.05□□□□□ -2.08
CKS1BP1-201ENST00000555221 A0A1B0GVG6 124 aa2.05□□□□□ -2.08
CKS1BP1-201ENST00000555221 NAP1L6A6NFF2 107 aa2.05□□□□□ -2.08
CKS1BP1-201ENST00000555221 ZNF736B4DX44 427 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP1-201ENST00000555221 H3BUA1 57 aa2.05□□□□□ -2.08
CKS1BP1-201ENST00000555221 GABARAPH6UMI1 98 aa2.05□□□□□ -2.08
CKS1BP1-201ENST00000555221 LST1O00453 97 aa2.05□□□□□ -2.08
CKS1BP1-201ENST00000555221 GPX1P07203 203 aa2.05□□□□□ -2.08
CKS1BP1-201ENST00000555221 HIST1H1BP16401 226 aaKnown RBP2.05□□□□□ -2.08
CKS1BP1-201ENST00000555221 INSL3P51460 131 aa2.05□□□□□ -2.08
CKS1BP1-201ENST00000555221 TCL1AP56279 114 aa2.05□□□□□ -2.08
CKS1BP1-201ENST00000555221 VBP1P61758 197 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms