RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 SSBP1Q04837 148 aaKnown RBP-0.26□□□□□ -2.45
SCAF11-215ENST00000551391 KRTAP6-1Q3LI64 71 aa-0.26□□□□□ -2.45
SCAF11-215ENST00000551391 IFI27L1Q96BM0 104 aa-0.26□□□□□ -2.45
SCAF11-215ENST00000551391 TMEM242Q9NWH2 141 aa-0.26□□□□□ -2.45
SCAF11-215ENST00000551391 CADP27708 2225 aa-0.27□□□□□ -2.45
SCAF11-215ENST00000551391 J3QLW9 94 aa-0.27□□□□□ -2.45
SCAF11-215ENST00000551391 M0R2P5 195 aa-0.27□□□□□ -2.45
SCAF11-215ENST00000551391 APODP05090 189 aa-0.27□□□□□ -2.45
SCAF11-215ENST00000551391 CMPK1P30085 196 aa-0.27□□□□□ -2.45
SCAF11-215ENST00000551391 KIF13AQ9H1H9 1805 aa-0.28□□□□□ -2.45
SCAF11-215ENST00000551391 H0YJX3 145 aa-0.28□□□□□ -2.45
SCAF11-215ENST00000551391 CCDC153Q494R4 210 aa-0.28□□□□□ -2.45
SCAF11-215ENST00000551391 CLLU1Q5K131 121 aa-0.28□□□□□ -2.45
SCAF11-215ENST00000551391 MACF1Q9UPN3 7388 aaKnown RBP-0.29□□□□□ -2.46
SCAF11-215ENST00000551391 DBIP07108 87 aaKnown RBP-0.29□□□□□ -2.46
SCAF11-215ENST00000551391 NPC2P61916 151 aa-0.29□□□□□ -2.46
SCAF11-215ENST00000551391 MORN2Q502X0 79 aa-0.29□□□□□ -2.46
SCAF11-215ENST00000551391 SLC48A1Q6P1K1 146 aa-0.29□□□□□ -2.46
SCAF11-215ENST00000551391 C4orf33Q8N1A6 199 aa-0.29□□□□□ -2.46
SCAF11-215ENST00000551391 COX7B2Q8TF08 81 aa-0.29□□□□□ -2.46
SCAF11-215ENST00000551391 Q96NJ1 140 aa-0.29□□□□□ -2.46
SCAF11-215ENST00000551391 LSM2Q9Y333 95 aaKnown RBP-0.29□□□□□ -2.46
SCAF11-215ENST00000551391 FLNCQ14315 2725 aa-0.3□□□□□ -2.46
SCAF11-215ENST00000551391 FAM74A4Q5TZK3 123 aa-0.3□□□□□ -2.46
SCAF11-215ENST00000551391 CACNA1AO00555 2505 aa-0.31□□□□□ -2.46
SCAF11-215ENST00000551391 TRBV7-1A0A0A6YYK4 115 aa-0.31□□□□□ -2.46
SCAF11-215ENST00000551391 TAC4Q86UU9 113 aa-0.31□□□□□ -2.46
SCAF11-215ENST00000551391 C20orf197Q8N268 126 aa-0.31□□□□□ -2.46
SCAF11-215ENST00000551391 ABCA2Q9BZC7 2435 aa-0.31□□□□□ -2.46
SCAF11-215ENST00000551391 AHCTF1Q8WYP5 2266 aa-0.31□□□□□ -2.46
SCAF11-215ENST00000551391 WNK2Q9Y3S1 2297 aa-0.31□□□□□ -2.46
SCAF11-215ENST00000551391 LAMB1P07942 1786 aa-0.32□□□□□ -2.46
SCAF11-215ENST00000551391 CHD9Q3L8U1 2897 aa-0.32□□□□□ -2.46
SCAF11-215ENST00000551391 ERCC6Q03468 1493 aa-0.32□□□□□ -2.46
SCAF11-215ENST00000551391 TRBV20-1A0A075B6N2 111 aa-0.32□□□□□ -2.46
SCAF11-215ENST00000551391 TRAV12-3A0A0B4J271 114 aa-0.32□□□□□ -2.46
SCAF11-215ENST00000551391 SPCS2Q15005 226 aa-0.32□□□□□ -2.46
SCAF11-215ENST00000551391 V9GYV3 84 aa-0.32□□□□□ -2.46
SCAF11-215ENST00000551391 PHIPQ8WWQ0 1821 aa-0.32□□□□□ -2.46
SCAF11-215ENST00000551391 B2MP61769 119 aa-0.33□□□□□ -2.46
SCAF11-215ENST00000551391 LINC01545Q5VT33 79 aa-0.33□□□□□ -2.46
SCAF11-215ENST00000551391 AKAP11Q9UKA4 1901 aa-0.33□□□□□ -2.46
SCAF11-215ENST00000551391 KIAA0100Q14667 2235 aaKnown RBP-0.33□□□□□ -2.46
SCAF11-215ENST00000551391 NRXN2Q9P2S2 1712 aa-0.33□□□□□ -2.46
SCAF11-215ENST00000551391 ANKRD17O75179 2603 aaKnown RBP-0.34□□□□□ -2.46
SCAF11-215ENST00000551391 NSD1Q96L73 2696 aaPredicted RBP-0.34□□□□□ -2.46
SCAF11-215ENST00000551391 TMEM14DPA8MWL7 114 aa-0.34□□□□□ -2.46
SCAF11-215ENST00000551391 ACYP2P14621 99 aa-0.34□□□□□ -2.46
SCAF11-215ENST00000551391 INSL4Q14641 139 aa-0.34□□□□□ -2.46
SCAF11-215ENST00000551391 Q6ZRX8 168 aa-0.34□□□□□ -2.46
SCAF11-215ENST00000551391 SCP2D1Q9UJQ7 156 aa-0.34□□□□□ -2.46
SCAF11-215ENST00000551391 MUC12Q9UKN1 5478 aa-0.34□□□□□ -2.46
SCAF11-215ENST00000551391 SYNJ1O43426 1573 aa-0.35□□□□□ -2.47
SCAF11-215ENST00000551391 NCS1P62166 190 aa-0.35□□□□□ -2.47
SCAF11-215ENST00000551391 MMGT1Q8N4V1 131 aa-0.35□□□□□ -2.47
SCAF11-215ENST00000551391 VSTM2AQ8TAG5 236 aa-0.35□□□□□ -2.47
SCAF11-215ENST00000551391 SAR1AQ9NR31 198 aa-0.35□□□□□ -2.47
SCAF11-215ENST00000551391 NDUFA12Q9UI09 145 aa-0.35□□□□□ -2.47
SCAF11-215ENST00000551391 HMCN2Q8NDA2 5059 aa-0.35□□□□□ -2.47
SCAF11-215ENST00000551391 OVOS2A0A0J9YW53 1432 aa-0.36□□□□□ -2.47
SCAF11-215ENST00000551391 OVOS2Q6IE36 1432 aa-0.36□□□□□ -2.47
SCAF11-215ENST00000551391 C10orf142B7Z368 130 aa-0.36□□□□□ -2.47
SCAF11-215ENST00000551391 SCGB1A1P11684 91 aa-0.36□□□□□ -2.47
SCAF11-215ENST00000551391 MRPL40Q9NQ50 206 aaKnown RBP-0.36□□□□□ -2.47
SCAF11-215ENST00000551391 GCHFRP30047 84 aa-0.37□□□□□ -2.47
SCAF11-215ENST00000551391 SPANXN1Q5VSR9 72 aa-0.37□□□□□ -2.47
SCAF11-215ENST00000551391 AIF1LQ9BQI0 150 aa-0.37□□□□□ -2.47
SCAF11-215ENST00000551391 BATF3Q9NR55 127 aa-0.37□□□□□ -2.47
SCAF11-215ENST00000551391 GOLGA3Q08378 1498 aa-0.37□□□□□ -2.47
SCAF11-215ENST00000551391 SIPA1L3O60292 1781 aaPredicted RBP-0.37□□□□□ -2.47
SCAF11-215ENST00000551391 NCOR1O75376 2440 aa-0.38□□□□□ -2.47
SCAF11-215ENST00000551391 TRGV1A0A0A0MS02 117 aa-0.38□□□□□ -2.47
SCAF11-215ENST00000551391 IFITM1P13164 125 aa-0.38□□□□□ -2.47
SCAF11-215ENST00000551391 ADGRB1O14514 1584 aa-0.38□□□□□ -2.47
SCAF11-215ENST00000551391 MUC22E2RYF6 1773 aaPredicted RBP-0.38□□□□□ -2.47
SCAF11-215ENST00000551391 PARP14Q460N5 1801 aa-0.38□□□□□ -2.47
SCAF11-215ENST00000551391 LRP2P98164 4655 aa-0.39□□□□□ -2.47
SCAF11-215ENST00000551391 DSTQ03001 7570 aaKnown RBP-0.39□□□□□ -2.47
SCAF11-215ENST00000551391 DOCK11Q5JSL3 2073 aa-0.39□□□□□ -2.47
SCAF11-215ENST00000551391 DISP2A7MBM2 1401 aa-0.39□□□□□ -2.47
SCAF11-215ENST00000551391 MUC2Q02817 5179 aa-0.39□□□□□ -2.47
SCAF11-215ENST00000551391 TENM4Q6N022 2769 aa-0.4□□□□□ -2.47
SCAF11-215ENST00000551391 IBTKQ9P2D0 1353 aaPredicted RBP-0.4□□□□□ -2.47
SCAF11-215ENST00000551391 TSPAN19P0C672 248 aa-0.4□□□□□ -2.47
SCAF11-215ENST00000551391 EDDM3BP56851 147 aa-0.4□□□□□ -2.47
SCAF11-215ENST00000551391 C9orf116Q5BN46 136 aaPredicted RBP-0.4□□□□□ -2.47
SCAF11-215ENST00000551391 UBE2DNLQ8IWF7 75 aa-0.4□□□□□ -2.47
SCAF11-215ENST00000551391 CYP4F30PQ9H0H9 118 aa-0.4□□□□□ -2.47
SCAF11-215ENST00000551391 BIVM-ERCC5R4GMW8 1640 aa-0.41□□□□□ -2.47
SCAF11-215ENST00000551391 FAM236AA0A1B0GUQ0 79 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 FAM236BA0A1B0GV22 79 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 G3V318 75 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 NCR2O95944 276 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 PIRTP0C851 137 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 IGLC6P0CF74 106 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 UBE2D1P51668 147 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 Q5VV11 94 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 MIC13Q5XKP0 118 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 PYDC1Q8WXC3 89 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 WFDC6Q9BQY6 131 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms