RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 CYP2G1PQ6ZSU1 146 aa-0.18□□□□□ -2.44
CCDC38-204ENST00000546816 SMIM11BQ8TCY0 68 aa-0.18□□□□□ -2.44
CCDC38-204ENST00000546816 UNC79Q9P2D8 2635 aa-0.18□□□□□ -2.44
CCDC38-204ENST00000546816 MED13LQ71F56 2210 aa-0.19□□□□□ -2.44
CCDC38-204ENST00000546816 DBIP07108 87 aaKnown RBP-0.19□□□□□ -2.44
CCDC38-204ENST00000546816 NMBP08949 121 aa-0.19□□□□□ -2.44
CCDC38-204ENST00000546816 COX4I1P13073 169 aa-0.19□□□□□ -2.44
CCDC38-204ENST00000546816 SSBP1Q04837 148 aaKnown RBP-0.19□□□□□ -2.44
CCDC38-204ENST00000546816 Q96NJ1 140 aa-0.19□□□□□ -2.44
CCDC38-204ENST00000546816 U3KQA8 63 aa-0.19□□□□□ -2.44
CCDC38-204ENST00000546816 TRBV20-1A0A075B6N2 111 aa-0.2□□□□□ -2.44
CCDC38-204ENST00000546816 C4orf33Q8N1A6 199 aa-0.2□□□□□ -2.44
CCDC38-204ENST00000546816 C20orf197Q8N268 126 aa-0.2□□□□□ -2.44
CCDC38-204ENST00000546816 FAM213BQ8TBF2 198 aa-0.2□□□□□ -2.44
CCDC38-204ENST00000546816 COX7B2Q8TF08 81 aa-0.2□□□□□ -2.44
CCDC38-204ENST00000546816 TMEM242Q9NWH2 141 aa-0.2□□□□□ -2.44
CCDC38-204ENST00000546816 F5P12259 2224 aa-0.2□□□□□ -2.44
CCDC38-204ENST00000546816 CACNA1CQ13936 2221 aa-0.2□□□□□ -2.44
CCDC38-204ENST00000546816 HMCN2Q8NDA2 5059 aa-0.2□□□□□ -2.44
CCDC38-204ENST00000546816 ERCC6Q03468 1493 aa-0.21□□□□□ -2.44
CCDC38-204ENST00000546816 NSD1Q96L73 2696 aaPredicted RBP-0.21□□□□□ -2.44
CCDC38-204ENST00000546816 APODP05090 189 aa-0.21□□□□□ -2.44
CCDC38-204ENST00000546816 LINC01545Q5VT33 79 aa-0.21□□□□□ -2.44
CCDC38-204ENST00000546816 MRPL40Q9NQ50 206 aaKnown RBP-0.21□□□□□ -2.44
CCDC38-204ENST00000546816 MYO7AQ13402 2215 aa-0.21□□□□□ -2.44
CCDC38-204ENST00000546816 F8P00451 2351 aa-0.21□□□□□ -2.44
CCDC38-204ENST00000546816 ASXL3Q9C0F0 2248 aa-0.22□□□□□ -2.44
CCDC38-204ENST00000546816 SYNJ1O43426 1573 aa-0.22□□□□□ -2.44
CCDC38-204ENST00000546816 TRBV7-1A0A0A6YYK4 115 aa-0.22□□□□□ -2.44
CCDC38-204ENST00000546816 TRAV12-3A0A0B4J271 114 aa-0.22□□□□□ -2.44
CCDC38-204ENST00000546816 SCGB1A1P11684 91 aa-0.22□□□□□ -2.44
CCDC38-204ENST00000546816 SPCS2Q15005 226 aa-0.22□□□□□ -2.44
CCDC38-204ENST00000546816 FAM74A4Q5TZK3 123 aa-0.22□□□□□ -2.44
CCDC38-204ENST00000546816 SLC48A1Q6P1K1 146 aa-0.22□□□□□ -2.44
CCDC38-204ENST00000546816 V9GYV3 84 aa-0.22□□□□□ -2.44
CCDC38-204ENST00000546816 NCS1P62166 190 aa-0.23□□□□□ -2.45
CCDC38-204ENST00000546816 Q6ZRX8 168 aa-0.23□□□□□ -2.45
CCDC38-204ENST00000546816 NDUFA12Q9UI09 145 aa-0.23□□□□□ -2.45
CCDC38-204ENST00000546816 KIF13AQ9H1H9 1805 aa-0.23□□□□□ -2.45
CCDC38-204ENST00000546816 PLXNA1Q9UIW2 1896 aa-0.23□□□□□ -2.45
CCDC38-204ENST00000546816 LAMB1P07942 1786 aa-0.24□□□□□ -2.45
CCDC38-204ENST00000546816 UBR5O95071 2799 aaPredicted RBP-0.24□□□□□ -2.45
CCDC38-204ENST00000546816 INSL4Q14641 139 aa-0.24□□□□□ -2.45
CCDC38-204ENST00000546816 MMGT1Q8N4V1 131 aa-0.24□□□□□ -2.45
CCDC38-204ENST00000546816 VSTM2AQ8TAG5 236 aa-0.24□□□□□ -2.45
CCDC38-204ENST00000546816 SAR1AQ9NR31 198 aa-0.24□□□□□ -2.45
CCDC38-204ENST00000546816 CADP27708 2225 aa-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 TRGV1A0A0A0MS02 117 aa-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 FAM236AA0A1B0GUQ0 79 aa-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 FAM236BA0A1B0GV22 79 aa-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 TMEM14DPA8MWL7 114 aa-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 IGLC6P0CF74 106 aa-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 ACYP2P14621 99 aa-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 HIST1H1AQ02539 215 aaPredicted RBP-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 MIC13Q5XKP0 118 aa-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 AIF1LQ9BQI0 150 aa-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 OVOS2A0A0J9YW53 1432 aa-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 OVOS2Q6IE36 1432 aa-0.25□□□□□ -2.45
CCDC38-204ENST00000546816 CHD9Q3L8U1 2897 aa-0.26□□□□□ -2.45
CCDC38-204ENST00000546816 PHIPQ8WWQ0 1821 aa-0.26□□□□□ -2.45
CCDC38-204ENST00000546816 ANKRD30AQ9BXX3 1397 aa-0.26□□□□□ -2.45
CCDC38-204ENST00000546816 PITX3O75364 302 aa-0.26□□□□□ -2.45
CCDC38-204ENST00000546816 TSPAN19P0C672 248 aa-0.26□□□□□ -2.45
CCDC38-204ENST00000546816 SPANXN1Q5VSR9 72 aa-0.26□□□□□ -2.45
CCDC38-204ENST00000546816 PYDC1Q8WXC3 89 aa-0.26□□□□□ -2.45
CCDC38-204ENST00000546816 CACNA1AO00555 2505 aa-0.26□□□□□ -2.45
CCDC38-204ENST00000546816 NRXN2Q9P2S2 1712 aa-0.27□□□□□ -2.45
CCDC38-204ENST00000546816 ADGRB1O14514 1584 aa-0.27□□□□□ -2.45
CCDC38-204ENST00000546816 DISP2A7MBM2 1401 aa-0.27□□□□□ -2.45
CCDC38-204ENST00000546816 IBTKQ9P2D0 1353 aaPredicted RBP-0.27□□□□□ -2.45
CCDC38-204ENST00000546816 CLPSL1A2RUU4 121 aa-0.27□□□□□ -2.45
CCDC38-204ENST00000546816 PIRTP0C851 137 aa-0.27□□□□□ -2.45
CCDC38-204ENST00000546816 GCHFRP30047 84 aa-0.27□□□□□ -2.45
CCDC38-204ENST00000546816 C9orf116Q5BN46 136 aaPredicted RBP-0.27□□□□□ -2.45
CCDC38-204ENST00000546816 BATF3Q9NR55 127 aa-0.27□□□□□ -2.45
CCDC38-204ENST00000546816 AKAP11Q9UKA4 1901 aa-0.27□□□□□ -2.45
CCDC38-204ENST00000546816 GOLGA3Q08378 1498 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 PRG4Q92954 1404 aaPredicted RBP-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 M0R129 80 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 NCR2O95944 276 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 LINC00694P0DN24 101 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 UBE2D1P51668 147 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 EDDM3BP56851 147 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 DR1Q01658 176 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 AKAP14Q86UN6 197 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 C10orf82Q8WW14 230 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 WFDC6Q9BQY6 131 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 SCP2D1Q9UJQ7 156 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 MUC22E2RYF6 1773 aaPredicted RBP-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 WNK2Q9Y3S1 2297 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 MUC12Q9UKN1 5478 aa-0.28□□□□□ -2.45
CCDC38-204ENST00000546816 KIAA0100Q14667 2235 aaKnown RBP-0.29□□□□□ -2.46
CCDC38-204ENST00000546816 G3V318 75 aa-0.29□□□□□ -2.46
CCDC38-204ENST00000546816 CKS1BP61024 79 aa-0.29□□□□□ -2.46
CCDC38-204ENST00000546816 SSBP3-AS1Q7Z2R9 100 aa-0.29□□□□□ -2.46
CCDC38-204ENST00000546816 CYP4F30PQ9H0H9 118 aa-0.29□□□□□ -2.46
CCDC38-204ENST00000546816 AHCTF1Q8WYP5 2266 aa-0.29□□□□□ -2.46
CCDC38-204ENST00000546816 ABCA2Q9BZC7 2435 aa-0.29□□□□□ -2.46
CCDC38-204ENST00000546816 FLNCQ14315 2725 aa-0.29□□□□□ -2.46
CCDC38-204ENST00000546816 ARHGEF10O15013 1369 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms