RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	CLDND2	Q8NHS1	167 aa		2.73	□□□□□ -1.97
PCM1-223	ENST00000524356	ZNF418	Q8TF45	676 aa	Predicted RBP	2.73	□□□□□ -1.97
PCM1-223	ENST00000524356	DCANP1	Q8TF63	244 aa		2.73	□□□□□ -1.97
PCM1-223	ENST00000524356	LINC00588	Q9Y4M8	146 aa		2.73	□□□□□ -1.97
PCM1-223	ENST00000524356	TRBV6-6	A0A0A6YYG2	114 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	IRGM	A1A4Y4	181 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356		A6NED7	52 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	PHOX2A	O14813	284 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	OR2T1	O43869	369 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	PGLYRP1	O75594	196 aa	Predicted RBP	2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	MPC2	O95563	127 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	IGKV1D-33	P01593	117 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	IGKV1-33	P01594	117 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	IGLV1-47	P01700	117 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	PMP2	P02689	132 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	ZNF14	P17017	642 aa	Predicted RBP	2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	S100A4	P26447	101 aa	Known RBP	2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	TAS2R20	P59543	309 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	VMA21	Q3ZAQ7	101 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	MSRB3	Q8IXL7	192 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	C10orf126	Q8N4M7	172 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	OR51A4	Q8NGJ6	313 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	OR2T10	Q8NGZ9	312 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	ZNF431	Q8TF32	576 aa	Predicted RBP	2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	TMEM106A	Q96A25	262 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	ZC2HC1A	Q96GY0	325 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	AP1S3	Q96PC3	154 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	ZNF471	Q9BX82	626 aa	Predicted RBP	2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	LCE3D	Q9BYE3	92 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	TMEM133	Q9H2Q1	129 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	C11orf1	Q9H5F2	150 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	XAGE1A	Q9HD64	81 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	SLC39A9	Q9NUM3	307 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	COMMD3	Q9UBI1	195 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	TNFSF18	Q9UNG2	199 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	PCLO	Q9Y6V0	5065 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	HERC2	O95714	4834 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	DNAH1	Q9P2D7	4330 aa		2.72	□□□□□ -1.97
PCM1-223	ENST00000524356	EXPH5	Q8NEV8	1989 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	PNMA8C	A0A1B0GUJ8	204 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356		B4DSR2	109 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	SH2D1A	O60880	128 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	WISP3	O95389	354 aa	Predicted RBP	2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	MSMB	P08118	114 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	LGALS3	P17931	250 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	PSMB8	P28062	276 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	SDC2	P34741	201 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	SSR2	P43308	183 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	RPL27A	P46776	148 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	NDUFA6	P56556	154 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	YPEL3	P61236	119 aa	Predicted RBP	2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	EIF5A	P63241	154 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	RPL18	Q07020	188 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	LINC01554	Q52M75	96 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	BCL2L15	Q5TBC7	163 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	TMEM244	Q5VVB8	128 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356		Q5W150	140 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	CYB561D1	Q8N8Q1	229 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	STAG3L4	Q8TBR4	150 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	MUCL1	Q96DR8	90 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	PSMG3	Q9BT73	122 aa	Predicted RBP	2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	SMCO4	Q9NRQ5	59 aa		2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	MRPL16	Q9NX20	251 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-223	ENST00000524356	TRBV24-1	A0A075B6N3	115 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	IGHV1-18	A0A0C4DH31	117 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	IGHV1-58	A0A0C4DH39	117 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	TRBV7-6	A0A0J9YX20	115 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	LOC107984640	A0A0U1RRK4	108 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	MDFIC2	A0A1B0GVS7	189 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	IFITM5	A6NNB3	132 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	LY6L	H3BQJ8	138 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	PANO1	I0J062	215 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356		M0R233	179 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	LECT2	O14960	151 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	LEPROT	O15243	131 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	PIN1P1	O15428	100 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	SLC25A20	O43772	301 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	CST7	O76096	145 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	CFD	P00746	253 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	GPX1	P07203	203 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	RBM11	P57052	281 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	FXYD7	P58549	80 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	HIST1H4A	P62805	103 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	MEF2B	Q02080	365 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	MSMO1	Q15800	293 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	DEFB116	Q30KQ4	102 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	SPANXN3	Q5MJ09	141 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	KPRP	Q5T749	579 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	AMMECR1L	Q6DCA0	310 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	TMEM14EP	Q6UXP3	125 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	TRAPPC6B	Q86SZ2	158 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	HIST3H2BB	Q8N257	126 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	SPANXA2-OT1	Q8N9U9	137 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	OR5A2	Q8NGI9	324 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	S100A13	Q99584	98 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	MGLL	Q99685	303 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	RNF5	Q99942	180 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	UPK3B	Q9BT76	320 aa		2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	MCTS1	Q9ULC4	181 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-223	ENST00000524356	DNAH3	Q8TD57	4116 aa		2.7	□□□□□ -1.98

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