RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 GAGE7O76087 117 aa11.62□□□□□ -0.55
TRIM54-203ENST00000485306 GAGE12FP0CL80 117 aa11.62□□□□□ -0.55
TRIM54-203ENST00000485306 GAGE12GP0CL81 117 aa11.62□□□□□ -0.55
TRIM54-203ENST00000485306 GAGE12IP0CL82 117 aa11.62□□□□□ -0.55
TRIM54-203ENST00000485306 CTRLP40313 264 aa11.62□□□□□ -0.55
TRIM54-203ENST00000485306 CCL18P55774 89 aa11.62□□□□□ -0.55
TRIM54-203ENST00000485306 ZFP82Q8N141 532 aa11.62□□□□□ -0.55
TRIM54-203ENST00000485306 GTSF1Q8WW33 167 aa11.62□□□□□ -0.55
TRIM54-203ENST00000485306 CNFNQ9BYD5 112 aa11.62□□□□□ -0.55
TRIM54-203ENST00000485306 DNAH10Q8IVF4 4471 aa11.61□□□□□ -0.55
TRIM54-203ENST00000485306 HIGD1CA8MV81 97 aa11.61□□□□□ -0.55
TRIM54-203ENST00000485306 BORCS7Q96B45 105 aa11.61□□□□□ -0.55
TRIM54-203ENST00000485306 C18orf15Q96N68 181 aa11.61□□□□□ -0.55
TRIM54-203ENST00000485306 TPPP3Q9BW30 176 aa11.61□□□□□ -0.55
TRIM54-203ENST00000485306 RPS10P5Q9NQ39 176 aa11.61□□□□□ -0.55
TRIM54-203ENST00000485306 TRGV1A0A0A0MS02 117 aa11.6□□□□□ -0.55
TRIM54-203ENST00000485306 NXPH4O95158 308 aa11.6□□□□□ -0.55
TRIM54-203ENST00000485306 S100A1P23297 94 aa11.6□□□□□ -0.55
TRIM54-203ENST00000485306 ZNF876PQ49A33 203 aa11.6□□□□□ -0.55
TRIM54-203ENST00000485306 SPANXN1Q5VSR9 72 aa11.6□□□□□ -0.55
TRIM54-203ENST00000485306 LYZL1Q6UWQ5 148 aa11.6□□□□□ -0.55
TRIM54-203ENST00000485306 Q6ZR54 194 aa11.6□□□□□ -0.55
TRIM54-203ENST00000485306 Q6ZTI0 123 aa11.6□□□□□ -0.55
TRIM54-203ENST00000485306 NACAE9PAV3 2078 aa11.59□□□□□ -0.55
TRIM54-203ENST00000485306 PRSS29PA6NIE9 313 aa11.59□□□□□ -0.55
TRIM54-203ENST00000485306 KCNIP4Q6PIL6 250 aa11.59□□□□□ -0.55
TRIM54-203ENST00000485306 NUP35Q8NFH5 326 aa11.59□□□□□ -0.55
TRIM54-203ENST00000485306 OR10AG1Q8NH19 301 aa11.59□□□□□ -0.55
TRIM54-203ENST00000485306 TRGV2A0A075B6R0 118 aa11.58□□□□□ -0.56
TRIM54-203ENST00000485306 TRAV9-1A0A075B6T8 112 aa11.58□□□□□ -0.56
TRIM54-203ENST00000485306 TRAV26-1A0A087WT03 109 aa11.58□□□□□ -0.56
TRIM54-203ENST00000485306 A8MWV9 139 aa11.58□□□□□ -0.56
TRIM54-203ENST00000485306 CIDEAO60543 219 aa11.58□□□□□ -0.56
TRIM54-203ENST00000485306 PGLYRP4Q96LB8 373 aa11.58□□□□□ -0.56
TRIM54-203ENST00000485306 MRPL16Q9NX20 251 aaKnown RBP11.58□□□□□ -0.56
TRIM54-203ENST00000485306 A0A1B0GUT8 65 aa11.57□□□□□ -0.56
TRIM54-203ENST00000485306 M0R381 172 aa11.57□□□□□ -0.56
TRIM54-203ENST00000485306 RTL8CO15255 209 aa11.57□□□□□ -0.56
TRIM54-203ENST00000485306 S100PP25815 95 aa11.57□□□□□ -0.56
TRIM54-203ENST00000485306 RIGQ13278 110 aa11.57□□□□□ -0.56
TRIM54-203ENST00000485306 C1orf134Q5TEV5 83 aa11.57□□□□□ -0.56
TRIM54-203ENST00000485306 A0A0J9YY99 117 aa11.56□□□□□ -0.56
TRIM54-203ENST00000485306 A0A1B0GW15 77 aa11.56□□□□□ -0.56
TRIM54-203ENST00000485306 H3BNG1 76 aa11.56□□□□□ -0.56
TRIM54-203ENST00000485306 ATP6V1G1O75348 118 aa11.56□□□□□ -0.56
TRIM54-203ENST00000485306 TRGC1P0CF51 173 aa11.56□□□□□ -0.56
TRIM54-203ENST00000485306 HOXA5P20719 270 aa11.56□□□□□ -0.56
TRIM54-203ENST00000485306 ATP5L2Q7Z4Y8 100 aa11.56□□□□□ -0.56
TRIM54-203ENST00000485306 TRAV4A0A0B4J268 109 aa11.55□□□□□ -0.56
TRIM54-203ENST00000485306 RS1O15537 224 aa11.55□□□□□ -0.56
TRIM54-203ENST00000485306 S100A8P05109 93 aa11.55□□□□□ -0.56
TRIM54-203ENST00000485306 NTF3P20783 257 aa11.55□□□□□ -0.56
TRIM54-203ENST00000485306 TWIST1Q15672 202 aa11.55□□□□□ -0.56
TRIM54-203ENST00000485306 ZNRF2Q8NHG8 242 aa11.55□□□□□ -0.56
TRIM54-203ENST00000485306 BTF3L4Q96K17 158 aa11.55□□□□□ -0.56
TRIM54-203ENST00000485306 AP1S3Q96PC3 154 aa11.55□□□□□ -0.56
TRIM54-203ENST00000485306 LINC00588Q9Y4M8 146 aa11.55□□□□□ -0.56
TRIM54-203ENST00000485306 RHODO00212 210 aa11.54□□□□□ -0.56
TRIM54-203ENST00000485306 SMIM15Q7Z3B0 74 aa11.54□□□□□ -0.56
TRIM54-203ENST00000485306 OR4C5Q8NGB2 326 aa11.54□□□□□ -0.56
TRIM54-203ENST00000485306 MUC21A0A0G2JKD1 596 aa11.53□□□□□ -0.56
TRIM54-203ENST00000485306 NBDYA0A0U1RRE5 68 aa11.53□□□□□ -0.56
TRIM54-203ENST00000485306 MUC21A0A140T8X8 626 aa11.53□□□□□ -0.56
TRIM54-203ENST00000485306 ATRAIDQ6UW56 229 aa11.53□□□□□ -0.56
TRIM54-203ENST00000485306 ZFP2Q6ZN57 461 aa11.53□□□□□ -0.56
TRIM54-203ENST00000485306 HECTD4Q9Y4D8 3996 aa11.53□□□□□ -0.56
TRIM54-203ENST00000485306 A0A1B0GVY2 172 aa11.52□□□□□ -0.57
TRIM54-203ENST00000485306 CFAP126Q5VTH2 177 aa11.52□□□□□ -0.57
TRIM54-203ENST00000485306 RASL11AQ6T310 242 aa11.52□□□□□ -0.57
TRIM54-203ENST00000485306 SMCO4Q9NRQ5 59 aa11.52□□□□□ -0.57
TRIM54-203ENST00000485306 SMIM17P0DL12 118 aa11.51□□□□□ -0.57
TRIM54-203ENST00000485306 HBBP68871 147 aa11.51□□□□□ -0.57
TRIM54-203ENST00000485306 SLAQ13239 276 aa11.51□□□□□ -0.57
TRIM54-203ENST00000485306 Q9H8V8 135 aa11.51□□□□□ -0.57
TRIM54-203ENST00000485306 A0A1B0GXF2 115 aa11.5□□□□□ -0.57
TRIM54-203ENST00000485306 CRYGDP07320 174 aa11.5□□□□□ -0.57
TRIM54-203ENST00000485306 SSTP61278 116 aa11.5□□□□□ -0.57
TRIM54-203ENST00000485306 TMEM191AQ9H0A3 160 aa11.5□□□□□ -0.57
TRIM54-203ENST00000485306 DPH3P1Q9H4G8 78 aa11.5□□□□□ -0.57
TRIM54-203ENST00000485306 MSRB1Q9NZV6 116 aa11.5□□□□□ -0.57
TRIM54-203ENST00000485306 IGHV3-53P01767 116 aa11.49□□□□□ -0.57
TRIM54-203ENST00000485306 ESRGQ1W209 222 aa11.49□□□□□ -0.57
TRIM54-203ENST00000485306 COX19Q49B96 90 aa11.49□□□□□ -0.57
TRIM54-203ENST00000485306 UFSP1Q6NVU6 142 aa11.49□□□□□ -0.57
TRIM54-203ENST00000485306 MRPL54Q6P161 138 aaKnown RBP11.49□□□□□ -0.57
TRIM54-203ENST00000485306 C6orf223Q8N319 242 aa11.49□□□□□ -0.57
TRIM54-203ENST00000485306 C14orf178Q8N769 122 aaPredicted RBP11.49□□□□□ -0.57
TRIM54-203ENST00000485306 GATD1Q8NB37 220 aa11.49□□□□□ -0.57
TRIM54-203ENST00000485306 VSIG2Q96IQ7 327 aa11.49□□□□□ -0.57
TRIM54-203ENST00000485306 ZNF479Q96JC4 524 aa11.49□□□□□ -0.57
TRIM54-203ENST00000485306 JPT2Q9H910 190 aa11.49□□□□□ -0.57
TRIM54-203ENST00000485306 URGCP-MRPS24S4R325 110 aa11.49□□□□□ -0.57
TRIM54-203ENST00000485306 MUC4Q99102 2169 aa11.48□□□□□ -0.57
TRIM54-203ENST00000485306 TRBV24-1A0A075B6N3 115 aa11.48□□□□□ -0.57
TRIM54-203ENST00000485306 PAX4O43316 350 aa11.48□□□□□ -0.57
TRIM54-203ENST00000485306 EVI2AP22794 236 aa11.48□□□□□ -0.57
TRIM54-203ENST00000485306 TTC32Q5I0X7 151 aa11.48□□□□□ -0.57
TRIM54-203ENST00000485306 FRZBQ92765 325 aa11.48□□□□□ -0.57
TRIM54-203ENST00000485306 UPK3BQ9BT76 320 aa11.48□□□□□ -0.57
TRIM54-203ENST00000485306 PRO0255Q9UI72 69 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms