RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 RBAKDNA6NC62 111 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 CCDC179H3BU77 68 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 J3QLW9 94 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 TNFSF15O95150 251 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 MT-ND4LP03901 98 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 DBIP07108 87 aaKnown RBP0.03□□□□□ -2.4
SCAF11-207ENST00000484275 B2MP61769 119 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 EMX2Q04743 252 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 MORN2Q502X0 79 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 ERG28Q9UKR5 140 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 HIGD1AQ9Y241 93 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 NOP16Q9Y3C1 178 aaKnown RBP0.03□□□□□ -2.4
SCAF11-207ENST00000484275 DNAJC15Q9Y5T4 150 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 STAB1Q9NY15 2570 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 PRDM2Q13029 1718 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 IFT172Q9UG01 1749 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 ASXL3Q9C0F0 2248 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 WNK3Q9BYP7 1800 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 MUC2Q02817 5179 aa0.03□□□□□ -2.41
SCAF11-207ENST00000484275 OVOS2A0A0J9YW53 1432 aa0.03□□□□□ -2.41
SCAF11-207ENST00000484275 F8P00451 2351 aa0.03□□□□□ -2.41
SCAF11-207ENST00000484275 OVOS2Q6IE36 1432 aa0.03□□□□□ -2.41
SCAF11-207ENST00000484275 LRRC37A3O60309 1634 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 PKD1L1Q8TDX9 2849 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 CMPK1P30085 196 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 TMEM244Q5VVB8 128 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 OR2T2Q6IF00 324 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 ATP11AUNQ6ZP68 121 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 TAC4Q86UU9 113 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 SMIM11BQ8TCY0 68 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 AIF1LQ9BQI0 150 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 ERCC6Q03468 1493 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 NCOR1O75376 2440 aa0.02□□□□□ -2.41
SCAF11-207ENST00000484275 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
SCAF11-207ENST00000484275 KDM3BQ7LBC6 1761 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 PLXNB2O15031 1838 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 CADP27708 2225 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 M0R2P5 195 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 SPINK1P00995 79 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 APODP05090 189 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 SCGB1A1P11684 91 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 COX4I1P13073 169 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 CCL3L1P16619 93 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 ELOF1P60002 83 aaKnown RBP0.01□□□□□ -2.41
SCAF11-207ENST00000484275 COX6A2Q02221 97 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 SSBP1Q04837 148 aaKnown RBP0.01□□□□□ -2.41
SCAF11-207ENST00000484275 Q5BKY6 102 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 CLLU1Q5K131 121 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 MRPL40Q9NQ50 206 aaKnown RBP0.01□□□□□ -2.41
SCAF11-207ENST00000484275 TMEM242Q9NWH2 141 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 ANKRD30AQ9BXX3 1397 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 SYNJ1O43426 1573 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 BIVM-ERCC5R4GMW8 1640 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 PATJQ8NI35 1801 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 MYH7P12883 1935 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 TCHHQ07283 1943 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 DOCK11Q5JSL3 2073 aa0.01□□□□□ -2.41
SCAF11-207ENST00000484275 TRBV20-1A0A075B6N2 111 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 GVQW2A0A096LPI5 108 aaPredicted RBP0□□□□□ -2.41
SCAF11-207ENST00000484275 CACNA1AO00555 2505 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 SLC25A6P12236 298 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 DAPK1P53355 1430 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 KMT2AQ03164 3969 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 CACNA1CQ13936 2221 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 FAM74A4Q5TZK3 123 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 SLC48A1Q6P1K1 146 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 MMGT1Q8N4V1 131 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 VSTM2AQ8TAG5 236 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 AHCTF1Q8WYP5 2266 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 IFI27L1Q96BM0 104 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 LSM2Q9Y333 95 aaKnown RBP0□□□□□ -2.41
SCAF11-207ENST00000484275 PCLOQ9Y6V0 5065 aa0□□□□□ -2.41
SCAF11-207ENST00000484275 NSD1Q96L73 2696 aaPredicted RBP-0□□□□□ -2.41
SCAF11-207ENST00000484275 DISP2A7MBM2 1401 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 MYOM3Q5VTT5 1437 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 PRG4Q92954 1404 aaPredicted RBP-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 A0A087WTM6 91 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 TFF1P04155 84 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 NPC2P61916 151 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 NCS1P62166 190 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 DR1Q01658 176 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 SPCS2Q15005 226 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 C4orf33Q8N1A6 199 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 FAM213BQ8TBF2 198 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 PYDC1Q8WXC3 89 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 SAR1AQ9NR31 198 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 SCP2D1Q9UJQ7 156 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 PIEZO2Q9H5I5 2752 aa-0.01□□□□□ -2.41
SCAF11-207ENST00000484275 KMT2CQ8NEZ4 4911 aaKnown RBP-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 GOLGA3Q08378 1498 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 TMEM2Q9UHN6 1383 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 FLNAP21333 2647 aaKnown RBP-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 TRBV7-1A0A0A6YYK4 115 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 TRAV12-3A0A0B4J271 114 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 NCR2O95944 276 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 NMBP08949 121 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 SPANXN1Q5VSR9 72 aa-0.02□□□□□ -2.41
SCAF11-207ENST00000484275 LINC01545Q5VT33 79 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms