RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 COL1A2P08123 1366 aa3.64□□□□□ -1.83
RBM39-233ENST00000482563 FREM1Q5H8C1 2179 aa3.63□□□□□ -1.83
RBM39-233ENST00000482563 CR1P17927 2039 aa3.63□□□□□ -1.83
RBM39-233ENST00000482563 TRBV10-3A0A0K0K1G6 114 aa3.63□□□□□ -1.83
RBM39-233ENST00000482563 H3BQF6 201 aa3.63□□□□□ -1.83
RBM39-233ENST00000482563 H3BRM9 83 aa3.63□□□□□ -1.83
RBM39-233ENST00000482563 Q6ZRN7 208 aaPredicted RBP3.63□□□□□ -1.83
RBM39-233ENST00000482563 MRPL36Q9P0J6 103 aaKnown RBP3.63□□□□□ -1.83
RBM39-233ENST00000482563 RTTNQ86VV8 2226 aa3.63□□□□□ -1.83
RBM39-233ENST00000482563 TRAV13-2A0A0B4J235 113 aa3.62□□□□□ -1.83
RBM39-233ENST00000482563 TRAV12-3A0A0B4J271 114 aa3.62□□□□□ -1.83
RBM39-233ENST00000482563 NUPR1O60356 82 aa3.62□□□□□ -1.83
RBM39-233ENST00000482563 FAM74A1Q5RGS3 127 aa3.62□□□□□ -1.83
RBM39-233ENST00000482563 TXNDC17Q9BRA2 123 aa3.62□□□□□ -1.83
RBM39-233ENST00000482563 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
RBM39-233ENST00000482563 TOPAZ1Q8N9V7 1692 aa3.62□□□□□ -1.83
RBM39-233ENST00000482563 CTTNBP2Q8WZ74 1663 aa3.62□□□□□ -1.83
RBM39-233ENST00000482563 TRBV10-1A0A0K0K1A3 114 aa3.61□□□□□ -1.83
RBM39-233ENST00000482563 IGLV3-1P01715 115 aa3.61□□□□□ -1.83
RBM39-233ENST00000482563 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
RBM39-233ENST00000482563 TNRC6AQ8NDV7 1962 aaKnown RBP3.61□□□□□ -1.83
RBM39-233ENST00000482563 GOLGA3Q08378 1498 aa3.61□□□□□ -1.83
RBM39-233ENST00000482563 C15orf53Q8NAA6 179 aa3.61□□□□□ -1.83
RBM39-233ENST00000482563 FAM213BQ8TBF2 198 aa3.61□□□□□ -1.83
RBM39-233ENST00000482563 REG4Q9BYZ8 158 aa3.61□□□□□ -1.83
RBM39-233ENST00000482563 SIP14410 1827 aa3.6□□□□□ -1.83
RBM39-233ENST00000482563 MYH8P13535 1937 aa3.6□□□□□ -1.83
RBM39-233ENST00000482563 PIGBOS1A0A0B4J2F0 54 aa3.6□□□□□ -1.83
RBM39-233ENST00000482563 DMAC1Q96GE9 116 aa3.6□□□□□ -1.83
RBM39-233ENST00000482563 PMCHL2Q9BQD1 86 aa3.6□□□□□ -1.83
RBM39-233ENST00000482563 PATJQ8NI35 1801 aa3.6□□□□□ -1.83
RBM39-233ENST00000482563 PPYP01298 95 aa3.59□□□□□ -1.83
RBM39-233ENST00000482563 CCL8P80075 99 aa3.59□□□□□ -1.83
RBM39-233ENST00000482563 TSLPQ969D9 159 aa3.59□□□□□ -1.83
RBM39-233ENST00000482563 PTPRDP23468 1912 aa3.59□□□□□ -1.83
RBM39-233ENST00000482563 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
RBM39-233ENST00000482563 NOTCH3Q9UM47 2321 aa3.58□□□□□ -1.84
RBM39-233ENST00000482563 MDC1Q14676 2089 aaKnown RBP3.58□□□□□ -1.84
RBM39-233ENST00000482563 TNS1Q9HBL0 1735 aaKnown RBP3.58□□□□□ -1.84
RBM39-233ENST00000482563 IGLV3-19P01714 112 aa3.58□□□□□ -1.84
RBM39-233ENST00000482563 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
RBM39-233ENST00000482563 LINC00299Q6ZSB3 139 aa3.58□□□□□ -1.84
RBM39-233ENST00000482563 COA5Q86WW8 74 aa3.58□□□□□ -1.84
RBM39-233ENST00000482563 NDUFA11Q86Y39 141 aa3.58□□□□□ -1.84
RBM39-233ENST00000482563 PCDH15Q96QU1 1955 aa3.57□□□□□ -1.84
RBM39-233ENST00000482563 CHD1O14646 1710 aa3.57□□□□□ -1.84
RBM39-233ENST00000482563 IGHV3-30P01768 117 aa3.57□□□□□ -1.84
RBM39-233ENST00000482563 IGHV3-30-5P0DP03 117 aa3.57□□□□□ -1.84
RBM39-233ENST00000482563 GNG11P61952 73 aa3.57□□□□□ -1.84
RBM39-233ENST00000482563 LAMC3Q9Y6N6 1575 aa3.57□□□□□ -1.84
RBM39-233ENST00000482563 CDK12Q9NYV4 1490 aaPredicted RBP3.57□□□□□ -1.84
RBM39-233ENST00000482563 CASP8AP2Q9UKL3 1982 aa3.56□□□□□ -1.84
RBM39-233ENST00000482563 PARP14Q460N5 1801 aa3.56□□□□□ -1.84
RBM39-233ENST00000482563 SBF2Q86WG5 1849 aa3.56□□□□□ -1.84
RBM39-233ENST00000482563 SIX6O95475 246 aa3.56□□□□□ -1.84
RBM39-233ENST00000482563 PDE6GP18545 87 aa3.56□□□□□ -1.84
RBM39-233ENST00000482563 CYSTM1Q9H1C7 97 aa3.56□□□□□ -1.84
RBM39-233ENST00000482563 KLK9Q9UKQ9 250 aa3.56□□□□□ -1.84
RBM39-233ENST00000482563 MED13Q9UHV7 2174 aa3.56□□□□□ -1.84
RBM39-233ENST00000482563 MYO18AQ92614 2054 aaKnown RBP3.56□□□□□ -1.84
RBM39-233ENST00000482563 PRDM15P57071 1507 aaPredicted RBP3.56□□□□□ -1.84
RBM39-233ENST00000482563 KIAA0100Q14667 2235 aaKnown RBP3.56□□□□□ -1.84
RBM39-233ENST00000482563 ALPK2Q86TB3 2170 aa3.56□□□□□ -1.84
RBM39-233ENST00000482563 MARF1Q9Y4F3 1742 aaKnown RBP3.56□□□□□ -1.84
RBM39-233ENST00000482563 UBE2D1P51668 147 aa3.56□□□□□ -1.84
RBM39-233ENST00000482563 ARFGEF3Q5TH69 2177 aa3.55□□□□□ -1.84
RBM39-233ENST00000482563 JMJD7-PLA2G4BH0Y9G9 81 aa3.55□□□□□ -1.84
RBM39-233ENST00000482563 TDRG1Q3Y452 100 aa3.55□□□□□ -1.84
RBM39-233ENST00000482563 ZGRF1Q86YA3 2104 aa3.55□□□□□ -1.84
RBM39-233ENST00000482563 BET1LQ9NYM9 111 aa3.55□□□□□ -1.84
RBM39-233ENST00000482563 DCAF1Q9Y4B6 1507 aa3.55□□□□□ -1.84
RBM39-233ENST00000482563 CHD3Q12873 2000 aaKnown RBP3.55□□□□□ -1.84
RBM39-233ENST00000482563 ICE1Q9Y2F5 2266 aa3.55□□□□□ -1.84
RBM39-233ENST00000482563 TET3O43151 1660 aa3.54□□□□□ -1.84
RBM39-233ENST00000482563 TRBV6-5A0A0K0K1A5 114 aa3.54□□□□□ -1.84
RBM39-233ENST00000482563 TEX49A0A1B0GTD5 131 aa3.54□□□□□ -1.84
RBM39-233ENST00000482563 CLPSL1A2RUU4 121 aa3.54□□□□□ -1.84
RBM39-233ENST00000482563 NMBP08949 121 aa3.54□□□□□ -1.84
RBM39-233ENST00000482563 C20orf78Q9BR46 151 aa3.54□□□□□ -1.84
RBM39-233ENST00000482563 CYP4F30PQ9H0H9 118 aa3.54□□□□□ -1.84
RBM39-233ENST00000482563 SHANK2Q9UPX8 1470 aa3.54□□□□□ -1.84
RBM39-233ENST00000482563 ABCC3O15438 1527 aa3.53□□□□□ -1.84
RBM39-233ENST00000482563 K7EP34 96 aa3.53□□□□□ -1.84
RBM39-233ENST00000482563 ASIPP42127 132 aa3.53□□□□□ -1.84
RBM39-233ENST00000482563 COL5A3P25940 1745 aaPredicted RBP3.53□□□□□ -1.84
RBM39-233ENST00000482563 KDM5DQ9BY66 1539 aa3.53□□□□□ -1.84
RBM39-233ENST00000482563 TRBV7-7A0A0K0K1E9 115 aa3.53□□□□□ -1.85
RBM39-233ENST00000482563 MRPS14O60783 128 aaKnown RBP3.53□□□□□ -1.85
RBM39-233ENST00000482563 SEC11AP67812 179 aa3.53□□□□□ -1.85
RBM39-233ENST00000482563 WFDC10AQ9H1F0 79 aa3.53□□□□□ -1.85
RBM39-233ENST00000482563 MON2Q7Z3U7 1717 aa3.52□□□□□ -1.85
RBM39-233ENST00000482563 NWD2Q9ULI1 1742 aa3.52□□□□□ -1.85
RBM39-233ENST00000482563 TRBV7-1A0A0A6YYK4 115 aa3.51□□□□□ -1.85
RBM39-233ENST00000482563 MYOZ3Q8TDC0 251 aa3.51□□□□□ -1.85
RBM39-233ENST00000482563 ZNF142P52746 1687 aaPredicted RBP3.51□□□□□ -1.85
RBM39-233ENST00000482563 KRTAP10-3P60369 221 aa3.5□□□□□ -1.85
RBM39-233ENST00000482563 MPV17LQ2QL34 196 aa3.5□□□□□ -1.85
RBM39-233ENST00000482563 ZNF818PQ6ZRF7 136 aa3.5□□□□□ -1.85
RBM39-233ENST00000482563 NAP1L6A6NFF2 107 aa3.5□□□□□ -1.85
RBM39-233ENST00000482563 DNAL4O96015 105 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms