RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 RNASE3P12724 160 aaKnown RBP12.29□□□□□ -0.44
PTPN7-209ENST00000477554 S100PP25815 95 aa12.29□□□□□ -0.44
PTPN7-209ENST00000477554 GTSF1Q8WW33 167 aa12.29□□□□□ -0.44
PTPN7-209ENST00000477554 SSBP4Q9BWG4 385 aaPredicted RBP12.29□□□□□ -0.44
PTPN7-209ENST00000477554 SNAI2O43623 268 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 IGHV3-53P01767 116 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 UBE2DNLQ8IWF7 75 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 C9orf85Q96MD7 179 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 SPXQ9BT56 116 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 TPPP3Q9BW30 176 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 LYZL1Q6UWQ5 148 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 NUP35Q8NFH5 326 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 BORCS7Q96B45 105 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 VSIG2Q96IQ7 327 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 SCRT2Q9NQ03 307 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 PHLDA3Q9Y5J5 127 aa12.28□□□□□ -0.44
PTPN7-209ENST00000477554 MUC4Q99102 2169 aa12.27□□□□□ -0.45
PTPN7-209ENST00000477554 CTRLP40313 264 aa12.27□□□□□ -0.45
PTPN7-209ENST00000477554 WDR73Q6P4I2 378 aa12.27□□□□□ -0.45
PTPN7-209ENST00000477554 PGLYRP4Q96LB8 373 aa12.27□□□□□ -0.45
PTPN7-209ENST00000477554 SMCO4Q9NRQ5 59 aa12.27□□□□□ -0.45
PTPN7-209ENST00000477554 PKHD1P08F94 4074 aa12.26□□□□□ -0.45
PTPN7-209ENST00000477554 TRAV9-1A0A075B6T8 112 aa12.26□□□□□ -0.45
PTPN7-209ENST00000477554 FAM3BP58499 235 aaPredicted RBP12.26□□□□□ -0.45
PTPN7-209ENST00000477554 CACNG7P62955 275 aa12.26□□□□□ -0.45
PTPN7-209ENST00000477554 C15orf53Q8NAA6 179 aa12.26□□□□□ -0.45
PTPN7-209ENST00000477554 LINC00588Q9Y4M8 146 aa12.26□□□□□ -0.45
PTPN7-209ENST00000477554 DNAH11Q96DT5 4516 aa12.26□□□□□ -0.45
PTPN7-209ENST00000477554 TRGV2A0A075B6R0 118 aa12.25□□□□□ -0.45
PTPN7-209ENST00000477554 M0R2P5 195 aa12.25□□□□□ -0.45
PTPN7-209ENST00000477554 RTL8CO15255 209 aa12.25□□□□□ -0.45
PTPN7-209ENST00000477554 SPANXN1Q5VSR9 72 aa12.25□□□□□ -0.45
PTPN7-209ENST00000477554 SYT8Q8NBV8 401 aa12.25□□□□□ -0.45
PTPN7-209ENST00000477554 CNFNQ9BYD5 112 aa12.25□□□□□ -0.45
PTPN7-209ENST00000477554 URGCP-MRPS24S4R325 110 aa12.25□□□□□ -0.45
PTPN7-209ENST00000477554 A0A1B0GUT8 65 aa12.24□□□□□ -0.45
PTPN7-209ENST00000477554 Q6ZR54 194 aa12.24□□□□□ -0.45
PTPN7-209ENST00000477554 ZFP82Q8N141 532 aa12.24□□□□□ -0.45
PTPN7-209ENST00000477554 PTH2Q96A98 100 aa12.24□□□□□ -0.45
PTPN7-209ENST00000477554 BTF3L4Q96K17 158 aa12.24□□□□□ -0.45
PTPN7-209ENST00000477554 RIGQ13278 110 aa12.23□□□□□ -0.45
PTPN7-209ENST00000477554 LGALS9BQ3B8N2 356 aa12.23□□□□□ -0.45
PTPN7-209ENST00000477554 PIK3CD-AS1Q5SR53 167 aa12.23□□□□□ -0.45
PTPN7-209ENST00000477554 OR10AG1Q8NH19 301 aa12.23□□□□□ -0.45
PTPN7-209ENST00000477554 ZNRF2Q8NHG8 242 aa12.23□□□□□ -0.45
PTPN7-209ENST00000477554 ATP5L2Q7Z4Y8 100 aa12.22□□□□□ -0.45
PTPN7-209ENST00000477554 CBLN2Q8IUK8 224 aa12.22□□□□□ -0.45
PTPN7-209ENST00000477554 C18orf15Q96N68 181 aa12.22□□□□□ -0.45
PTPN7-209ENST00000477554 DYNC1H1Q14204 4646 aaKnown RBP12.22□□□□□ -0.45
PTPN7-209ENST00000477554 A0A1B0GW15 77 aa12.21□□□□□ -0.45
PTPN7-209ENST00000477554 M0R381 172 aa12.21□□□□□ -0.45
PTPN7-209ENST00000477554 NXPH4O95158 308 aa12.21□□□□□ -0.45
PTPN7-209ENST00000477554 NTF3P20783 257 aa12.21□□□□□ -0.45
PTPN7-209ENST00000477554 ELOBQ15370 118 aa12.21□□□□□ -0.45
PTPN7-209ENST00000477554 ESRGQ1W209 222 aa12.21□□□□□ -0.45
PTPN7-209ENST00000477554 ZNF876PQ49A33 203 aa12.21□□□□□ -0.45
PTPN7-209ENST00000477554 RASL10AQ92737 203 aa12.21□□□□□ -0.45
PTPN7-209ENST00000477554 ZNF479Q96JC4 524 aa12.21□□□□□ -0.45
PTPN7-209ENST00000477554 A0A096LPF7 62 aa12.2□□□□□ -0.46
PTPN7-209ENST00000477554 MUC21A0A0G2JKD1 596 aa12.2□□□□□ -0.46
PTPN7-209ENST00000477554 MUC21A0A140T8X8 626 aa12.2□□□□□ -0.46
PTPN7-209ENST00000477554 SSTP61278 116 aa12.2□□□□□ -0.46
PTPN7-209ENST00000477554 FHL2Q14192 279 aa12.2□□□□□ -0.46
PTPN7-209ENST00000477554 TWIST1Q15672 202 aa12.2□□□□□ -0.46
PTPN7-209ENST00000477554 DMRTA1Q5VZB9 504 aa12.2□□□□□ -0.46
PTPN7-209ENST00000477554 SCO1O75880 301 aa12.2□□□□□ -0.46
PTPN7-209ENST00000477554 S100A8P05109 93 aa12.2□□□□□ -0.46
PTPN7-209ENST00000477554 KRTAP1-5Q9BYS1 174 aa12.2□□□□□ -0.46
PTPN7-209ENST00000477554 TRBV24-1A0A075B6N3 115 aa12.19□□□□□ -0.46
PTPN7-209ENST00000477554 TRGC1P0CF51 173 aa12.19□□□□□ -0.46
PTPN7-209ENST00000477554 HBBP68871 147 aa12.19□□□□□ -0.46
PTPN7-209ENST00000477554 MRPL54Q6P161 138 aaKnown RBP12.19□□□□□ -0.46
PTPN7-209ENST00000477554 RASL11AQ6T310 242 aa12.19□□□□□ -0.46
PTPN7-209ENST00000477554 SMIM15Q7Z3B0 74 aa12.19□□□□□ -0.46
PTPN7-209ENST00000477554 YPEL4Q96NS1 127 aa12.18□□□□□ -0.46
PTPN7-209ENST00000477554 AP1S3Q96PC3 154 aa12.18□□□□□ -0.46
PTPN7-209ENST00000477554 A0A1B0GVY2 172 aa12.17□□□□□ -0.46
PTPN7-209ENST00000477554 A0A1B0GXF2 115 aa12.17□□□□□ -0.46
PTPN7-209ENST00000477554 A8MWV9 139 aa12.17□□□□□ -0.46
PTPN7-209ENST00000477554 COX19Q49B96 90 aa12.17□□□□□ -0.46
PTPN7-209ENST00000477554 MSRB1Q9NZV6 116 aa12.17□□□□□ -0.46
PTPN7-209ENST00000477554 TGIF2-C20orf24A0A0A6YYL0 155 aa12.16□□□□□ -0.46
PTPN7-209ENST00000477554 CAMPP49913 170 aa12.16□□□□□ -0.46
PTPN7-209ENST00000477554 CRYBA4P53673 196 aa12.16□□□□□ -0.46
PTPN7-209ENST00000477554 KIAA1109Q2LD37 5005 aa12.15□□□□□ -0.46
PTPN7-209ENST00000477554 LOC100131303A0A0U1RQF7 123 aa12.15□□□□□ -0.46
PTPN7-209ENST00000477554 PAX4O43316 350 aa12.15□□□□□ -0.46
PTPN7-209ENST00000477554 SMIM17P0DL12 118 aa12.15□□□□□ -0.46
PTPN7-209ENST00000477554 CCL18P55774 89 aa12.15□□□□□ -0.46
PTPN7-209ENST00000477554 NBDYA0A0U1RRE5 68 aa12.14□□□□□ -0.47
PTPN7-209ENST00000477554 H3BNG1 76 aa12.14□□□□□ -0.47
PTPN7-209ENST00000477554 TMEM191AQ9H0A3 160 aa12.14□□□□□ -0.47
PTPN7-209ENST00000477554 HHLA3Q9XRX5 114 aa12.14□□□□□ -0.47
PTPN7-209ENST00000477554 TRAV4A0A0B4J268 109 aa12.13□□□□□ -0.47
PTPN7-209ENST00000477554 RS1O15537 224 aa12.13□□□□□ -0.47
PTPN7-209ENST00000477554 CIDEAO60543 219 aa12.13□□□□□ -0.47
PTPN7-209ENST00000477554 GATD1Q8NB37 220 aa12.13□□□□□ -0.47
PTPN7-209ENST00000477554 OR4C5Q8NGB2 326 aa12.13□□□□□ -0.47
PTPN7-209ENST00000477554 DPH3P1Q9H4G8 78 aa12.13□□□□□ -0.47
PTPN7-209ENST00000477554 PRSS29PA6NIE9 313 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms