RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 XIRP1Q702N8 1843 aaKnown RBP-0.38□□□□□ -2.47
PMS1-203ENST00000409593 PTPN13Q12923 2485 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 PDZD2O15018 2839 aa-0.38□□□□□ -2.47
PMS1-203ENST00000409593 A0A1B0GV72 72 aa-0.39□□□□□ -2.47
PMS1-203ENST00000409593 FABP1P07148 127 aa-0.39□□□□□ -2.47
PMS1-203ENST00000409593 SLC25A6P12236 298 aa-0.39□□□□□ -2.47
PMS1-203ENST00000409593 CCL3L1P16619 93 aa-0.39□□□□□ -2.47
PMS1-203ENST00000409593 FAT3Q8TDW7 4589 aa-0.39□□□□□ -2.47
PMS1-203ENST00000409593 PPRC1Q5VV67 1664 aaKnown RBP-0.39□□□□□ -2.47
PMS1-203ENST00000409593 CHD6Q8TD26 2715 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 CCDC171Q6TFL3 1326 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 PFDN1O60925 122 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 PSPHP78330 225 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 WFDC2Q14508 124 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 DEFB109BQ30KR1 87 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 KRTAP19-8Q3LI54 63 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 IFI27L1Q96BM0 104 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 TAS2R8Q9NYW2 309 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 FAM208BQ5VWN6 2430 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 VWFP04275 2813 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 PLXNA1Q9UIW2 1896 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 FLNAP21333 2647 aaKnown RBP-0.4□□□□□ -2.47
PMS1-203ENST00000409593 EP300Q09472 2414 aaPredicted RBP-0.4□□□□□ -2.47
PMS1-203ENST00000409593 ARAP1Q96P48 1450 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 TFAMQ00059 246 aaKnown RBP-0.4□□□□□ -2.47
PMS1-203ENST00000409593 SNX29P2Q8IUI4 249 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 TMEM35BQ8NCS4 154 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 CYP4F30PQ9H0H9 118 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 CENPHQ9H3R5 247 aa-0.4□□□□□ -2.47
PMS1-203ENST00000409593 LRP1BQ9NZR2 4599 aa-0.41□□□□□ -2.47
PMS1-203ENST00000409593 HERC2O95714 4834 aa-0.41□□□□□ -2.47
PMS1-203ENST00000409593 FAT2Q9NYQ8 4349 aa-0.41□□□□□ -2.47
PMS1-203ENST00000409593 TCRBV3S1A0A5B6 114 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 J3KT08 172 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 DPM2O94777 84 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 APOC1P02654 83 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 RPS28P62857 69 aaKnown RBP-0.41□□□□□ -2.48
PMS1-203ENST00000409593 OR8B8Q15620 311 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 Q5VSD8 79 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 TMEM244Q5VVB8 128 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 OR8I2Q8N0Y5 310 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 C20orf197Q8N268 126 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 DYNLRB2Q8TF09 96 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 LSM2Q9Y333 95 aaKnown RBP-0.41□□□□□ -2.48
PMS1-203ENST00000409593 SPTBN2O15020 2390 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 PTPRQQ9UMZ3 2332 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 UHRF1BP1LA0JNW5 1464 aa-0.41□□□□□ -2.48
PMS1-203ENST00000409593 AKAP6Q13023 2319 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 AKAP11Q9UKA4 1901 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 TRAV36DV7A0A075B6V5 113 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 TRAV2A0A0B4J234 112 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 RBAKDNA6NC62 111 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 M0R3E3 92 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 APODP05090 189 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 PAEPP09466 180 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 HLA-DRB4P13762 266 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 SPAG11BQ08648 103 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 Q6ZRX8 168 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 CYP2G1PQ6ZSU1 146 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 NDUFA11Q86Y39 141 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 C4orf33Q8N1A6 199 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 ATP6V0E2Q8NHE4 81 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 PPP1R1CQ8WVI7 109 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 DDA1Q9BW61 102 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 BANF2Q9H503 90 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 TMEM242Q9NWH2 141 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 PRO0255Q9UI72 69 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 HLA-DRB4X5D2U9 266 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 KIF13AQ9H1H9 1805 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 GOLGA3Q08378 1498 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 BCL9LQ86UU0 1499 aa-0.42□□□□□ -2.48
PMS1-203ENST00000409593 PHIPQ8WWQ0 1821 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 A0A1B0GX51 115 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 G3V318 75 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 TNFSF15O95150 251 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 COX4I1P13073 169 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 S100GP29377 79 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 KRTAP20-2Q3LI61 65 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 COX7B2Q8TF08 81 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 VPS25Q9BRG1 176 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 CNFNQ9BYD5 112 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 NOP16Q9Y3C1 178 aaKnown RBP-0.43□□□□□ -2.48
PMS1-203ENST00000409593 DOPEY1Q5JWR5 2465 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 RIF1Q5UIP0 2472 aaKnown RBP-0.43□□□□□ -2.48
PMS1-203ENST00000409593 SETXQ7Z333 2677 aaKnown RBP-0.43□□□□□ -2.48
PMS1-203ENST00000409593 SYNJ1O43426 1573 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 MUC22E2RYF6 1773 aaPredicted RBP-0.43□□□□□ -2.48
PMS1-203ENST00000409593 TRGV1A0A0A0MS02 117 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 TRBV7-1A0A0A6YYK4 115 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 CLPSL1A2RUU4 121 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 SCTP09683 121 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 MT4P47944 62 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 SSBP1Q04837 148 aaKnown RBP-0.43□□□□□ -2.48
PMS1-203ENST00000409593 CLLU1Q5K131 121 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 CALML5Q9NZT1 146 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 ERCC6Q03468 1493 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 DOCK11Q5JSL3 2073 aa-0.43□□□□□ -2.48
PMS1-203ENST00000409593 KIAA0100Q14667 2235 aaKnown RBP-0.44□□□□□ -2.48
PMS1-203ENST00000409593 CREBBPQ92793 2442 aa-0.44□□□□□ -2.48
PMS1-203ENST00000409593 SETD2Q9BYW2 2564 aaPredicted RBP-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms