RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 SPINK8P0C7L1 97 aa7.86□□□□□ -1.15
PKP4-201ENST00000389757 P0C879 139 aa7.86□□□□□ -1.15
PKP4-201ENST00000389757 PRR14LQ5THK1 2151 aa7.86□□□□□ -1.15
PKP4-201ENST00000389757 CHD3Q12873 2000 aaKnown RBP7.86□□□□□ -1.15
PKP4-201ENST00000389757 NUP210LQ5VU65 1888 aa7.86□□□□□ -1.15
PKP4-201ENST00000389757 A0A1B0GV72 72 aa7.86□□□□□ -1.15
PKP4-201ENST00000389757 PYY3Q5JQD4 70 aa7.86□□□□□ -1.15
PKP4-201ENST00000389757 IGHV3-30P01768 117 aa7.85□□□□□ -1.15
PKP4-201ENST00000389757 IGHV3-33P01772 117 aa7.85□□□□□ -1.15
PKP4-201ENST00000389757 IGHV3-30-3P0DP02 117 aa7.85□□□□□ -1.15
PKP4-201ENST00000389757 IGHV3-30-5P0DP03 117 aa7.85□□□□□ -1.15
PKP4-201ENST00000389757 NAA38Q9BRA0 125 aaKnown RBP7.85□□□□□ -1.15
PKP4-201ENST00000389757 TLN1Q9Y490 2541 aaKnown RBP7.85□□□□□ -1.15
PKP4-201ENST00000389757 KMT2EQ8IZD2 1858 aa7.85□□□□□ -1.15
PKP4-201ENST00000389757 CRIP3Q6Q6R5 217 aa7.85□□□□□ -1.15
PKP4-201ENST00000389757 ZNF503Q96F45 646 aa7.84□□□□□ -1.15
PKP4-201ENST00000389757 GATA1P15976 413 aaPredicted RBP7.84□□□□□ -1.15
PKP4-201ENST00000389757 Q6ZPA2 131 aa7.84□□□□□ -1.15
PKP4-201ENST00000389757 TMEM263Q8WUH6 116 aaKnown RBP7.84□□□□□ -1.15
PKP4-201ENST00000389757 RPL39LQ96EH5 51 aaKnown RBP7.84□□□□□ -1.15
PKP4-201ENST00000389757 TRAV8-4A0A0B4J246 113 aa7.84□□□□□ -1.15
PKP4-201ENST00000389757 TRAV8-3A0A0A6YYJ7 113 aa7.84□□□□□ -1.15
PKP4-201ENST00000389757 BRWD1-AS2P59051 145 aa7.84□□□□□ -1.15
PKP4-201ENST00000389757 C2orf82Q6UX34 121 aa7.84□□□□□ -1.15
PKP4-201ENST00000389757 AMTNQ6UX39 209 aa7.84□□□□□ -1.15
PKP4-201ENST00000389757 SNHG12Q9BXW3 62 aa7.84□□□□□ -1.15
PKP4-201ENST00000389757 TMEM126AQ9H061 195 aa7.84□□□□□ -1.15
PKP4-201ENST00000389757 IGKV1D-37A0A075B6S9 117 aa7.84□□□□□ -1.16
PKP4-201ENST00000389757 UBE2BP63146 152 aa7.84□□□□□ -1.16
PKP4-201ENST00000389757 KIR3DS1Q14943 382 aa7.84□□□□□ -1.16
PKP4-201ENST00000389757 J3QQQ9 107 aa7.83□□□□□ -1.16
PKP4-201ENST00000389757 MED14OSP0DP75 135 aa7.83□□□□□ -1.16
PKP4-201ENST00000389757 C1orf229Q6ZS94 237 aaPredicted RBP7.83□□□□□ -1.16
PKP4-201ENST00000389757 MSRB1Q9NZV6 116 aa7.83□□□□□ -1.16
PKP4-201ENST00000389757 WNK1Q9H4A3 2382 aa7.83□□□□□ -1.16
PKP4-201ENST00000389757 DEFB114Q30KQ6 69 aa7.83□□□□□ -1.16
PKP4-201ENST00000389757 EDA2RQ9HAV5 297 aa7.83□□□□□ -1.16
PKP4-201ENST00000389757 C5orf38Q86SI9 138 aa7.83□□□□□ -1.16
PKP4-201ENST00000389757 TRBV7-3A0A075B6L6 115 aa7.83□□□□□ -1.16
PKP4-201ENST00000389757 CRYGBP07316 175 aa7.82□□□□□ -1.16
PKP4-201ENST00000389757 HILS1P60008 231 aa7.82□□□□□ -1.16
PKP4-201ENST00000389757 PCNX3Q9H6A9 2034 aa7.82□□□□□ -1.16
PKP4-201ENST00000389757 IGLV10-54A0A075B6I4 117 aa7.82□□□□□ -1.16
PKP4-201ENST00000389757 IGLL5B9A064 214 aa7.82□□□□□ -1.16
PKP4-201ENST00000389757 SLC25A29Q8N8R3 303 aa7.82□□□□□ -1.16
PKP4-201ENST00000389757 PSMG3-AS1Q96PY0 264 aa7.82□□□□□ -1.16
PKP4-201ENST00000389757 IGLL1P15814 213 aa7.82□□□□□ -1.16
PKP4-201ENST00000389757 C11orf45Q8TAV5 145 aa7.82□□□□□ -1.16
PKP4-201ENST00000389757 TNCP24821 2201 aa7.81□□□□□ -1.16
PKP4-201ENST00000389757 CAMK2N2Q96S95 79 aa7.81□□□□□ -1.16
PKP4-201ENST00000389757 PRO0255Q9UI72 69 aa7.81□□□□□ -1.16
PKP4-201ENST00000389757 TM2D2Q9BX73 214 aa7.81□□□□□ -1.16
PKP4-201ENST00000389757 ABCA2Q9BZC7 2435 aa7.81□□□□□ -1.16
PKP4-201ENST00000389757 TRBV6-1A0A0K0K1D8 114 aa7.81□□□□□ -1.16
PKP4-201ENST00000389757 SCRT2Q9NQ03 307 aa7.81□□□□□ -1.16
PKP4-201ENST00000389757 K7EQG2 157 aa7.81□□□□□ -1.16
PKP4-201ENST00000389757 COX7A2LO14548 114 aa7.81□□□□□ -1.16
PKP4-201ENST00000389757 ZFP2Q6ZN57 461 aa7.81□□□□□ -1.16
PKP4-201ENST00000389757 LINC01006Q8NI28 216 aa7.81□□□□□ -1.16
PKP4-201ENST00000389757 Q6ZWC4 215 aa7.8□□□□□ -1.16
PKP4-201ENST00000389757 ZNF702PQ9H963 129 aa7.8□□□□□ -1.16
PKP4-201ENST00000389757 ZNF664Q8N3J9 261 aa7.8□□□□□ -1.16
PKP4-201ENST00000389757 LRP4O75096 1905 aa7.8□□□□□ -1.16
PKP4-201ENST00000389757 C11orf1Q9H5F2 150 aa7.8□□□□□ -1.16
PKP4-201ENST00000389757 KRTAP10-9P60411 292 aa7.8□□□□□ -1.16
PKP4-201ENST00000389757 MBD6Q96DN6 1003 aa7.8□□□□□ -1.16
PKP4-201ENST00000389757 MDFICQ9P1T7 246 aa7.8□□□□□ -1.16
PKP4-201ENST00000389757 COL5A1P20908 1838 aaPredicted RBP7.8□□□□□ -1.16
PKP4-201ENST00000389757 EIF4EBP1Q13541 118 aaPredicted RBP7.8□□□□□ -1.16
PKP4-201ENST00000389757 DKK2Q9UBU2 259 aa7.8□□□□□ -1.16
PKP4-201ENST00000389757 POLR3KQ9Y2Y1 108 aaPredicted RBP7.8□□□□□ -1.16
PKP4-201ENST00000389757 TRAV13-2A0A0B4J235 113 aa7.79□□□□□ -1.16
PKP4-201ENST00000389757 C10orf99Q6UWK7 81 aa7.79□□□□□ -1.16
PKP4-201ENST00000389757 PLA2G2EQ9NZK7 142 aa7.79□□□□□ -1.16
PKP4-201ENST00000389757 RPL18AQ02543 176 aaKnown RBP7.79□□□□□ -1.16
PKP4-201ENST00000389757 ZNF747Q9BV97 191 aa7.79□□□□□ -1.16
PKP4-201ENST00000389757 Q9H8V8 135 aa7.79□□□□□ -1.16
PKP4-201ENST00000389757 TRAV4A0A0B4J268 109 aa7.79□□□□□ -1.16
PKP4-201ENST00000389757 SMIM9A6NGZ8 99 aa7.79□□□□□ -1.16
PKP4-201ENST00000389757 FGF6P10767 208 aa7.79□□□□□ -1.16
PKP4-201ENST00000389757 ODF3Q96PU9 254 aa7.79□□□□□ -1.16
PKP4-201ENST00000389757 SPATA25Q9BR10 227 aa7.79□□□□□ -1.16
PKP4-201ENST00000389757 CTRLP40313 264 aa7.78□□□□□ -1.16
PKP4-201ENST00000389757 VSIG2Q96IQ7 327 aa7.78□□□□□ -1.16
PKP4-201ENST00000389757 HERV-K104P63124 156 aa7.78□□□□□ -1.16
PKP4-201ENST00000389757 MTURNQ8N3F0 131 aa7.78□□□□□ -1.16
PKP4-201ENST00000389757 PRRC2AP48634 2157 aaKnown RBP7.78□□□□□ -1.16
PKP4-201ENST00000389757 GTSF1Q8WW33 167 aa7.78□□□□□ -1.16
PKP4-201ENST00000389757 COX8AP10176 69 aa7.78□□□□□ -1.16
PKP4-201ENST00000389757 TAL2Q16559 108 aa7.78□□□□□ -1.16
PKP4-201ENST00000389757 BOD1L2Q8IYS8 172 aa7.78□□□□□ -1.16
PKP4-201ENST00000389757 C9JAW5 83 aa7.78□□□□□ -1.16
PKP4-201ENST00000389757 PSMB8P28062 276 aa7.78□□□□□ -1.16
PKP4-201ENST00000389757 Q8N6K4 173 aa7.77□□□□□ -1.17
PKP4-201ENST00000389757 TRBV10-1A0A0K0K1A3 114 aa7.77□□□□□ -1.17
PKP4-201ENST00000389757 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.77□□□□□ -1.17
PKP4-201ENST00000389757 KLK12Q9UKR0 248 aa7.77□□□□□ -1.17
PKP4-201ENST00000389757 ARHGAP21Q5T5U3 1957 aa7.77□□□□□ -1.17
PKP4-201ENST00000389757 MRPL52Q86TS9 123 aaKnown RBP7.76□□□□□ -1.17
PKP4-201ENST00000389757 A0A0J9YXV3 536 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms