RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 COL4A1P02462 1669 aa7.27□□□□□ -1.25
PTPRT-205ENST00000373193 KIF26AQ9ULI4 1882 aaPredicted RBP7.27□□□□□ -1.25
PTPRT-205ENST00000373193 DSCAMO60469 2012 aa7.27□□□□□ -1.25
PTPRT-205ENST00000373193 TRBV10-2A0A0K0K1G8 114 aa7.27□□□□□ -1.25
PTPRT-205ENST00000373193 A6NED7 52 aa7.27□□□□□ -1.25
PTPRT-205ENST00000373193 MRPL36Q9P0J6 103 aaKnown RBP7.27□□□□□ -1.25
PTPRT-205ENST00000373193 LINC01545Q5VT33 79 aa7.27□□□□□ -1.25
PTPRT-205ENST00000373193 COL5A3P25940 1745 aaPredicted RBP7.27□□□□□ -1.25
PTPRT-205ENST00000373193 IGLC6P0CF74 106 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 ZNF833PQ6ZTB9 187 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 H0YGX0 51 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 COX7A2LO14548 114 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 ZNF491Q8N8L2 437 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 NDUFA4O00483 81 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 TCL1BO95988 128 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 SNURFQ9Y675 71 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 FNDC1Q4ZHG4 1894 aaPredicted RBP7.26□□□□□ -1.25
PTPRT-205ENST00000373193 E7EQL1 145 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 MSRB1Q9NZV6 116 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 C1orf195Q5TG92 126 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 Q0VFX4 171 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 DIAPH2-AS1Q14236 149 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 Q6ZS49 121 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 CTSGP08311 255 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 PRR4Q16378 134 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 APRG1Q8IVJ8 170 aa7.26□□□□□ -1.25
PTPRT-205ENST00000373193 NHSL1Q5SYE7 1610 aa7.25□□□□□ -1.25
PTPRT-205ENST00000373193 ZFP36L1Q07352 338 aaKnown RBP7.25□□□□□ -1.25
PTPRT-205ENST00000373193 K7ERS5 55 aa7.25□□□□□ -1.25
PTPRT-205ENST00000373193 WFDC10BQ8IUB3 73 aa7.25□□□□□ -1.25
PTPRT-205ENST00000373193 IGLV3-12A0A075B6K2 115 aa7.25□□□□□ -1.25
PTPRT-205ENST00000373193 C17orf58Q2M2W7 97 aa7.25□□□□□ -1.25
PTPRT-205ENST00000373193 ENHOQ6UWT2 76 aa7.25□□□□□ -1.25
PTPRT-205ENST00000373193 ZSWIM8A7E2V4 1837 aa7.25□□□□□ -1.25
PTPRT-205ENST00000373193 HIST2H2BDQ6DRA6 164 aa7.24□□□□□ -1.25
PTPRT-205ENST00000373193 TM2D2Q9BX73 214 aa7.24□□□□□ -1.25
PTPRT-205ENST00000373193 ABCA2Q9BZC7 2435 aa7.24□□□□□ -1.25
PTPRT-205ENST00000373193 CUL9Q8IWT3 2517 aa7.24□□□□□ -1.25
PTPRT-205ENST00000373193 PRR30Q53SZ7 412 aaPredicted RBP7.24□□□□□ -1.25
PTPRT-205ENST00000373193 USP17L23D6RBM5 183 aa7.24□□□□□ -1.25
PTPRT-205ENST00000373193 ATP5G1P05496 136 aa7.24□□□□□ -1.25
PTPRT-205ENST00000373193 CSRP2Q16527 193 aa7.24□□□□□ -1.25
PTPRT-205ENST00000373193 Q6ZR03 302 aa7.24□□□□□ -1.25
PTPRT-205ENST00000373193 NUP210Q8TEM1 1887 aaPredicted RBP7.24□□□□□ -1.25
PTPRT-205ENST00000373193 BPY2O14599 106 aa7.24□□□□□ -1.25
PTPRT-205ENST00000373193 TP73-AS1Q9UF72 201 aa7.23□□□□□ -1.25
PTPRT-205ENST00000373193 E9PQ18 207 aa7.23□□□□□ -1.25
PTPRT-205ENST00000373193 AGPAT4-IT1Q9H0P7 198 aa7.23□□□□□ -1.25
PTPRT-205ENST00000373193 IGHV1-69DA0A0B4J2H0 117 aa7.23□□□□□ -1.25
PTPRT-205ENST00000373193 IGHV1-69P01742 117 aa7.23□□□□□ -1.25
PTPRT-205ENST00000373193 C4orf48Q5BLP8 95 aa7.23□□□□□ -1.25
PTPRT-205ENST00000373193 K7EQD1 137 aa7.22□□□□□ -1.25
PTPRT-205ENST00000373193 NFE4Q86UQ8 179 aa7.22□□□□□ -1.25
PTPRT-205ENST00000373193 COA6Q5JTJ3 125 aaKnown RBP7.22□□□□□ -1.25
PTPRT-205ENST00000373193 SLPIP03973 132 aa7.22□□□□□ -1.25
PTPRT-205ENST00000373193 MSMBP08118 114 aa7.22□□□□□ -1.25
PTPRT-205ENST00000373193 ATP6V0E2Q8NHE4 81 aa7.22□□□□□ -1.25
PTPRT-205ENST00000373193 IGHV4-30-4P0DP06 118 aa7.22□□□□□ -1.25
PTPRT-205ENST00000373193 IGHV4-31P0DP07 118 aa7.22□□□□□ -1.25
PTPRT-205ENST00000373193 Q8N1Y9 231 aa7.22□□□□□ -1.25
PTPRT-205ENST00000373193 DIRC1Q969H9 104 aa7.22□□□□□ -1.25
PTPRT-205ENST00000373193 TMEM256-PLSCR3K7ERE1 68 aa7.21□□□□□ -1.25
PTPRT-205ENST00000373193 ELANEP08246 267 aa7.21□□□□□ -1.25
PTPRT-205ENST00000373193 ADAMTS9Q9P2N4 1935 aa7.21□□□□□ -1.25
PTPRT-205ENST00000373193 PRR15LQ9BU68 103 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 SPATA12Q7Z6I5 190 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 A0A096LNI7 61 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 CCDC179H3BU77 68 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 UQCRQO14949 82 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 PIK3CD-AS1Q5SR53 167 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 PRR20EP86478 221 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 PRR20CP86479 221 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 PRR20DP86480 221 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 PRR20BP86481 221 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 PRR20AP86496 221 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 LINC00643Q86TS7 51 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 DEFB4AO15263 64 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 CXCL5P42830 114 aa7.21□□□□□ -1.26
PTPRT-205ENST00000373193 JMJD7-PLA2G4BH0Y9G9 81 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 K7EM74 188 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 FANCD2OSQ96PS1 177 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 COX7BP24311 80 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 MIR7-3HGQ8N6C7 128 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 HIGD1BQ9P298 99 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 PLXNA4Q9HCM2 1894 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 ZNF883P0CG24 379 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 C16orf54Q6UWD8 224 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 SLURP1P55000 103 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 B3GALT5-AS1P59052 145 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 NDUFA11Q86Y39 141 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 Q96MF0 132 aa7.2□□□□□ -1.26
PTPRT-205ENST00000373193 TNS1Q9HBL0 1735 aaKnown RBP7.19□□□□□ -1.26
PTPRT-205ENST00000373193 C11orf86A6NJI1 115 aa7.19□□□□□ -1.26
PTPRT-205ENST00000373193 TIMM17BO60830 172 aa7.19□□□□□ -1.26
PTPRT-205ENST00000373193 GATA3P23771 443 aa7.19□□□□□ -1.26
PTPRT-205ENST00000373193 VWCEQ96DN2 955 aa7.19□□□□□ -1.26
PTPRT-205ENST00000373193 GTSF1Q8WW33 167 aa7.19□□□□□ -1.26
PTPRT-205ENST00000373193 LRCOL1A6NCL2 159 aa7.19□□□□□ -1.26
PTPRT-205ENST00000373193 NDUFA1O15239 70 aa7.19□□□□□ -1.26
PTPRT-205ENST00000373193 SIRPDQ9H106 197 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms