RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm7849D3YX03 116 aa16.85■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Cnih1O35372 144 aa16.85■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Tcstv1O70619 171 aa16.85■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Arrdc5Q497K5 325 aa16.85■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Tmed3Q78IS1 221 aa16.85■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Med12A2AGH6 2190 aa16.85■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Ighv5-6A0A075B5Q0 117 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Ighv1-26A0A075B5V0 117 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Gm20825J3QM67 227 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 P04219 140 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Ssty2Q149W4 227 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Gm21394Q497R7 227 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Gm20854Q62461 227 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Etfrf1Q91V16 86 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Rab31Q921E2 194 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Bmpr1bP36898 502 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Psg27Q497W2 474 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Rhox10Q4TU83 196 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Ctf1Q60753 203 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Gm5771Q792Y9 245 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 H2-M10.6Q85ZW5 330 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Olfr495Q8VF12 330 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Olfr830Q8VFJ5 315 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Tmem107Q9CPV0 140 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Rab9aQ9R0M6 201 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 ArtnQ9Z0L2 224 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Gm12728V9GX31 77 aa16.84■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Igkv4-57A0A0A6YYE7 117 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm17660B9UIU9 90 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm17669F6QL70 154 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Erdr1J3QMM0 206 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Mef2bO55087 349 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 PpyP10601 100 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Zfand3Q497H0 227 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Scgb2b2Q6UGQ3 114 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr411Q7TRW8 315 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Rbfox2Q8BP71 449 aaKnown RBP16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm9949Q8C9F4 104 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Tmem41bQ8K1A5 291 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr860Q8VFF7 317 aa16.83■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Ighv1-58A0A075B5W9 117 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Trbv12-2A0A0B4J1H1 124 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Trav23A0A0G2JG17 115 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm21732J3QM79 361 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm21921J3QNB5 361 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm8653K9J7G2 307 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Vmn1r117L7N2C9 307 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 P01728 117 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr1434Q7TQR9 312 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Asphd2Q80VP9 343 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm4763Q8CFJ5 196 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Acaa1aQ921H8 424 aaKnown RBP16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Pus1Q9WU56 423 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Arpc1bQ9WV32 372 aaKnown RBP16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 StrapQ9Z1Z2 350 aaKnown RBP16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Mcrip1Q3UGS4 97 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 MiaQ61865 130 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr1371Q7TQT7 311 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Psg22Q810J1 475 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Zfp459Q8BZ17 267 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm17334Q8C6U3 126 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr1102Q8VES2 324 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr1242Q8VGM6 306 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 ManfQ9CXI5 179 aaKnown RBP16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Tnfrsf13bQ9ET35 249 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Lsm4Q9QXA5 137 aaKnown RBP16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Mpdu1Q9R0Q9 247 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Sfrp4Q9Z1N6 351 aa16.82■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Ighv1-55A0A075B5W6 117 aa16.81■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Vma21-psA0A140T8R2 101 aa16.81■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm4791J3QQ14 102 aa16.81■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Reg1P43137 165 aa16.81■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gata4Q08369 441 aa16.81■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr1209Q3SXJ3 310 aa16.81■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Spem1Q5F289 310 aa16.81■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 4922502D21RikQ8C634 189 aa16.81■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr223Q8VF69 319 aa16.81■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Tmem189Q99LQ7 271 aa16.81■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Med13lQ6JPI3 2207 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Abca1P41233 2261 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Iglv1A0A075B663 117 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Ifna5P07349 189 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Slc25a31Q3V132 320 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 5730522E02RikQ5SP45 163 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 9430097D07RikQ8BS47 195 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Fam24aQ8CF27 98 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gm10306Q9CUK2 115 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Sgms2Q9D4B1 365 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Gtsf1Q9DAN6 167 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 CklfQ9DAS1 152 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Tbx21Q9JKD8 530 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Supt4h1bQ9Z199 117 aa16.8■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 P01659 112 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Rab2aP53994 212 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Loxl2P58022 776 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr141Q60880 325 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Lypd6Q8BPP5 171 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Olfr1323Q8VF35 309 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 Carhsp1Q9CR86 148 aa16.79■□□□□ 0.28
Ccdc88a-202ENSMUST00000109477 2200002J24RikQ9D807 110 aa16.79■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms