RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Abca1P41233 2261 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Olfr913E9Q716 312 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 TfpiO54819 306 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Slc25a17O70579 307 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Smim6Q3U0I6 56 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Q8BG31 207 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Olfr1002Q8VFK2 318 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Efcab10Q9D581 132 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Ccl28Q9JIL2 130 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Try5Q9QUK9 246 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Try4Q9R0T7 246 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Gab2Q9Z1S8 665 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Gm28171A0A087WQ19 227 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Ighv7-2A0A0A6YX91 119 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Trbv12-2A0A0B4J1H1 124 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Gm17455G3UW87 128 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Ifitm5O88728 134 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Bmpr1bP36898 502 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Fam3dP97805 223 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Patz1Q5NBY9 687 aaKnown RBP18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Psmb6Q60692 238 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Lrrc10Q8K3W2 274 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Map1lc3bQ9CQV6 125 aa18.17■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Pdzd2E9Q1M1 2796 aa18.16■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Tcstv1O70619 171 aa18.16■□□□□ 0.5
Scn1b-201ENSMUST00000098548 CntfrO88507 372 aa18.16■□□□□ 0.5
Scn1b-201ENSMUST00000098548 LtaP09225 202 aa18.16■□□□□ 0.5
Scn1b-201ENSMUST00000098548 LgalslbQ7TPX9 165 aa18.16■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Ell3Q80VR2 395 aa18.16■□□□□ 0.5
Scn1b-201ENSMUST00000098548 BsxQ810B3 232 aa18.16■□□□□ 0.5
Scn1b-201ENSMUST00000098548 AmtnQ9D3J8 213 aa18.16■□□□□ 0.5
Scn1b-201ENSMUST00000098548 HeylQ9DBX7 326 aa18.16■□□□□ 0.5
Scn1b-201ENSMUST00000098548 GlrxQ9QUH0 107 aa18.16■□□□□ 0.5
Scn1b-201ENSMUST00000098548 ArtnQ9Z0L2 224 aa18.16■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Platr25A0A1Y7VIZ1 466 aa18.15■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Olfr1472Q7TQQ9 314 aa18.15■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Commd5Q8R395 224 aa18.15■□□□□ 0.5
Scn1b-201ENSMUST00000098548 B3gnt9Q8VI16 399 aa18.15■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Q9CQT9 129 aa18.15■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Cyb5r3Q9DCN2 301 aaKnown RBP18.15■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Zfp119aQ9JIC0 545 aa18.15■□□□□ 0.5
Scn1b-201ENSMUST00000098548 Ighv1-58A0A075B5W9 117 aa18.14■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Ighv1-67A0A0G2JFN9 117 aa18.14■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Olfr1248A0A1L1SSZ5 307 aa18.14■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm4792Q569Q2 183 aa18.14■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Sox21Q811W0 276 aa18.14■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Slc16a13Q8CE94 428 aa18.14■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Olfr960Q8VET5 316 aa18.14■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Olfr1155Q8VFR3 314 aa18.14■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Rab9aQ9R0M6 201 aa18.14■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gpr132Q9Z282 382 aa18.14■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Ighv4-1A0A075B5R5 116 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Zfp109A0A0U1RPC5 652 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Pglyrp3A1A547 347 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm5849J3QPE5 117 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Olfr893K7N678 312 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Pax6P63015 422 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 EcscrQ3TZW0 214 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Spem1Q5F289 310 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Mex3bQ69Z36 601 aaKnown RBP18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Neil2Q6R2P8 329 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Olfr123Q8VFQ1 309 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Olfr346Q8VGJ7 309 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Chrdl1Q920C1 447 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Nicn1Q9CQM0 213 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Nanos1Q80WY3 267 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Vmn1r222Q8R269 308 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Lhfpl3Q9CTN8 222 aa18.13■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Zfp972A2AW65 139 aa18.12■□□□□ 0.49
Scn1b-201ENSMUST00000098548 P01728 117 aa18.12■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm9958Q8C9U4 106 aa18.12■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Fam174bQ8K064 153 aa18.12■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Cma2Q91VB1 246 aa18.12■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Lsm4Q9QXA5 137 aaKnown RBP18.12■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm20773A0A0A6YXW2 232 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm20807A0A0A6YXX7 232 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Trbv13-3A0A0B4J1H2 113 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Ighv8-9A0A0G2JET1 119 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm16519F8VQK7 162 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm20873J3QMQ9 232 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm20795J3QP49 232 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm21310J3QQ23 232 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 P06323 132 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Stfa1P35175 97 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Cd27P41272 250 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 KncnQ307W7 124 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm21440Q3TTD8 232 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Sdr39u1Q5M8N4 308 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Cdc34Q8CFI2 235 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Nkg7Q99PA5 165 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Vax2Q9WTP9 292 aa18.11■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Ighv1-26A0A075B5V0 117 aa18.1■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Trav17A0A075B655 113 aa18.1■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Iglv1A0A075B663 117 aa18.1■□□□□ 0.49
Scn1b-201ENSMUST00000098548 BC053393A0A0B4J1F6 192 aa18.1■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Olfr364-ps1A0A140T8Q2 307 aa18.1■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm37240E9QAY5 252 aa18.1■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gm15130F6PYN5 206 aa18.1■□□□□ 0.49
Scn1b-201ENSMUST00000098548 Gsx1P31315 261 aa18.1■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms