Protein–RNA interactions for Protein: Q920C1

Chrdl1, Chordin-like protein 1, mousemouse

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrdl1Q920C1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27,62■■■□□ 2,01
Chrdl1Q920C1 Gm25239-201ENSMUST00000174915 86 ntBASIC26,71■■□□□ 1,87
Chrdl1Q920C1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26,62■■□□□ 1,85
Chrdl1Q920C1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Chrdl1Q920C1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26,05■■□□□ 1,76
Chrdl1Q920C1 Psd-208ENSMUST00000224556 2034 ntBASIC25,98■■□□□ 1,75
Chrdl1Q920C1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25,64■■□□□ 1,7
Chrdl1Q920C1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Chrdl1Q920C1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25,04■■□□□ 1,6
Chrdl1Q920C1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24,76■■□□□ 1,55
Chrdl1Q920C1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24,75■■□□□ 1,55
Chrdl1Q920C1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24,73■■□□□ 1,55
Chrdl1Q920C1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24,7■■□□□ 1,54
Chrdl1Q920C1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Chrdl1Q920C1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24,52■■□□□ 1,52
Chrdl1Q920C1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,42■■□□□ 1,5
Chrdl1Q920C1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24,39■■□□□ 1,49
Chrdl1Q920C1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,37■■□□□ 1,49
Chrdl1Q920C1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24,21■■□□□ 1,47
Chrdl1Q920C1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24,18■■□□□ 1,46
Chrdl1Q920C1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24,11■■□□□ 1,45
Chrdl1Q920C1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23,98■■□□□ 1,43
Chrdl1Q920C1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,94■■□□□ 1,42
Chrdl1Q920C1 Gm15042-201ENSMUST00000120212 883 ntBASIC23,78■■□□□ 1,4
Chrdl1Q920C1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,77■■□□□ 1,4
Chrdl1Q920C1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23,74■■□□□ 1,39
Chrdl1Q920C1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23,66■■□□□ 1,38
Chrdl1Q920C1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23,61■■□□□ 1,37
Chrdl1Q920C1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23,6■■□□□ 1,37
Chrdl1Q920C1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23,5■■□□□ 1,35
Chrdl1Q920C1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23,44■■□□□ 1,34
Chrdl1Q920C1 Gm15045-201ENSMUST00000117359 883 ntBASIC23,39■■□□□ 1,33
Chrdl1Q920C1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23,39■■□□□ 1,33
Chrdl1Q920C1 Gm42596-201ENSMUST00000196305 1958 ntBASIC23,38■■□□□ 1,33
Chrdl1Q920C1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23,35■■□□□ 1,33
Chrdl1Q920C1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23,33■■□□□ 1,33
Chrdl1Q920C1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23,32■■□□□ 1,32
Chrdl1Q920C1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23,32■■□□□ 1,32
Chrdl1Q920C1 Gm10524-201ENSMUST00000181931 1893 ntBASIC23,3■■□□□ 1,32
Chrdl1Q920C1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23,28■■□□□ 1,32
Chrdl1Q920C1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23,27■■□□□ 1,32
Chrdl1Q920C1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,25■■□□□ 1,31
Chrdl1Q920C1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23,25■■□□□ 1,31
Chrdl1Q920C1 Gm24109-201ENSMUST00000175489 103 ntBASIC23,21■■□□□ 1,31
Chrdl1Q920C1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23,19■■□□□ 1,3
Chrdl1Q920C1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23,18■■□□□ 1,3
Chrdl1Q920C1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23,15■■□□□ 1,3
Chrdl1Q920C1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Chrdl1Q920C1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23,03■■□□□ 1,28
Chrdl1Q920C1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23■■□□□ 1,27
Chrdl1Q920C1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22,92■■□□□ 1,26
Chrdl1Q920C1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22,91■■□□□ 1,26
Chrdl1Q920C1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Chrdl1Q920C1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,82■■□□□ 1,24
Chrdl1Q920C1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22,82■■□□□ 1,24
Chrdl1Q920C1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Chrdl1Q920C1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22,79■■□□□ 1,24
Chrdl1Q920C1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22,74■■□□□ 1,23
Chrdl1Q920C1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
Chrdl1Q920C1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22,67■■□□□ 1,22
Chrdl1Q920C1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22,66■■□□□ 1,22
Chrdl1Q920C1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22,63■■□□□ 1,21
Chrdl1Q920C1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22,58■■□□□ 1,21
Chrdl1Q920C1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22,57■■□□□ 1,2
Chrdl1Q920C1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22,56■■□□□ 1,2
Chrdl1Q920C1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Chrdl1Q920C1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22,51■■□□□ 1,19
Chrdl1Q920C1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22,51■■□□□ 1,19
Chrdl1Q920C1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22,5■■□□□ 1,19
Chrdl1Q920C1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22,5■■□□□ 1,19
Chrdl1Q920C1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,48■■□□□ 1,19
Chrdl1Q920C1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22,43■■□□□ 1,18
Chrdl1Q920C1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22,41■■□□□ 1,18
Chrdl1Q920C1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,41■■□□□ 1,18
Chrdl1Q920C1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22,36■■□□□ 1,17
Chrdl1Q920C1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22,33■■□□□ 1,16
Chrdl1Q920C1 Gm23366-201ENSMUST00000175022 89 ntBASIC22,3■■□□□ 1,16
Chrdl1Q920C1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
Chrdl1Q920C1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22,23■■□□□ 1,15
Chrdl1Q920C1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22,21■■□□□ 1,15
Chrdl1Q920C1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22,21■■□□□ 1,15
Chrdl1Q920C1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22,19■■□□□ 1,14
Chrdl1Q920C1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22,18■■□□□ 1,14
Chrdl1Q920C1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,17■■□□□ 1,14
Chrdl1Q920C1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22,17■■□□□ 1,14
Chrdl1Q920C1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22,14■■□□□ 1,13
Chrdl1Q920C1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22,11■■□□□ 1,13
Chrdl1Q920C1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22,09■■□□□ 1,13
Chrdl1Q920C1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
Chrdl1Q920C1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22,02■■□□□ 1,12
Chrdl1Q920C1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22,02■■□□□ 1,12
Chrdl1Q920C1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21,99■■□□□ 1,11
Chrdl1Q920C1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21,97■■□□□ 1,11
Chrdl1Q920C1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21,96■■□□□ 1,11
Chrdl1Q920C1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21,96■■□□□ 1,11
Chrdl1Q920C1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21,96■■□□□ 1,11
Chrdl1Q920C1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,93■■□□□ 1,1
Chrdl1Q920C1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21,92■■□□□ 1,1
Chrdl1Q920C1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21,91■■□□□ 1,1
Chrdl1Q920C1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21,9■■□□□ 1,1
Retrieved 100 of 76,532 protein–RNA pairs in 7,5 ms