Protein–RNA interactions for Protein: P63015

Pax6, Paired box protein Pax-6, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax6P63015 Gm25239-201ENSMUST00000174915 86 ntBASIC30.47■■■□□ 2.47
Pax6P63015 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Pax6P63015 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pax6P63015 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pax6P63015 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pax6P63015 Gm15042-201ENSMUST00000120212 883 ntBASIC26.72■■□□□ 1.87
Pax6P63015 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pax6P63015 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pax6P63015 Gm24109-201ENSMUST00000175489 103 ntBASIC26.34■■□□□ 1.81
Pax6P63015 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Pax6P63015 Gm15045-201ENSMUST00000117359 883 ntBASIC26.18■■□□□ 1.78
Pax6P63015 Psd-208ENSMUST00000224556 2034 ntBASIC26.1■■□□□ 1.77
Pax6P63015 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pax6P63015 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pax6P63015 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pax6P63015 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pax6P63015 Gm23366-201ENSMUST00000175022 89 ntBASIC25.4■■□□□ 1.66
Pax6P63015 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pax6P63015 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.16■■□□□ 1.62
Pax6P63015 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pax6P63015 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pax6P63015 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pax6P63015 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pax6P63015 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pax6P63015 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pax6P63015 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pax6P63015 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pax6P63015 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pax6P63015 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pax6P63015 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pax6P63015 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pax6P63015 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Pax6P63015 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Pax6P63015 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.6■■□□□ 1.53
Pax6P63015 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pax6P63015 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pax6P63015 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pax6P63015 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pax6P63015 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.49■■□□□ 1.51
Pax6P63015 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.48■■□□□ 1.51
Pax6P63015 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pax6P63015 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pax6P63015 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pax6P63015 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
Pax6P63015 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pax6P63015 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.14■■□□□ 1.45
Pax6P63015 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.13■■□□□ 1.45
Pax6P63015 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pax6P63015 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pax6P63015 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pax6P63015 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pax6P63015 Gm25238-201ENSMUST00000174914 89 ntBASIC24.03■■□□□ 1.44
Pax6P63015 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.89■■□□□ 1.41
Pax6P63015 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pax6P63015 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pax6P63015 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pax6P63015 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pax6P63015 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pax6P63015 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.63■■□□□ 1.37
Pax6P63015 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pax6P63015 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pax6P63015 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pax6P63015 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pax6P63015 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.61■■□□□ 1.37
Pax6P63015 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.58■■□□□ 1.37
Pax6P63015 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
Pax6P63015 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Pax6P63015 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pax6P63015 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.46■■□□□ 1.35
Pax6P63015 Gm27325-201ENSMUST00000175467 74 ntBASIC23.43■■□□□ 1.34
Pax6P63015 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
Pax6P63015 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pax6P63015 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Pax6P63015 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pax6P63015 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.26■■□□□ 1.31
Pax6P63015 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pax6P63015 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pax6P63015 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.19■■□□□ 1.3
Pax6P63015 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pax6P63015 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Pax6P63015 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Pax6P63015 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.16■■□□□ 1.3
Pax6P63015 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pax6P63015 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.14■■□□□ 1.29
Pax6P63015 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Pax6P63015 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pax6P63015 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pax6P63015 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pax6P63015 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Pax6P63015 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Pax6P63015 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Pax6P63015 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pax6P63015 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pax6P63015 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pax6P63015 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pax6P63015 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pax6P63015 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pax6P63015 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.96■■□□□ 1.27
Pax6P63015 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pax6P63015 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms