RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Gprin2D3Z1D7 455 aa12.37□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 D430019H16RikJ3QPM6 83 aa12.37□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Vsig8Q6P3A4 417 aa12.37□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Dnal4Q9DCM4 105 aa12.37□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Trav7n-4A0A075B620 113 aa12.37□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Olfr1336Q8VGH5 314 aa12.37□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Tex48Q9DA81 110 aa12.37□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Zswim8Q3UHH1 1832 aaKnown RBP12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Map1bP14873 2464 aaKnown RBP12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Ripply2Q2WG76 128 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Wdr83osQ6ZWX0 106 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Olfr984Q8VFN1 314 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Egr4Q9WUF2 478 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Znf318Q99PP2 2237 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Zfp236S4R299 1847 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Ighv8-9A0A0G2JET1 119 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Gm21882J3QN86 361 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Cd69P37217 199 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Prss29Q99MS4 279 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Rab1bQ9D1G1 201 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 GlulP15105 373 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Olfr1192-ps1A0A1L1SRD7 309 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 SlaQ60898 281 aa12.36□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Olfr466E9Q2B9 308 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Olfr1367Q8VFG2 316 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Ccl28Q9JIL2 130 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 PikfyveQ9Z1T6 2097 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 NynrinQ5DTZ0 1840 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 BC053393A0A0B4J1F6 192 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Ucp1P12242 307 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Timm10bQ9WV96 100 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 PtcraP0C6B2 199 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Zic3Q62521 466 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 C1qtnf4Q8R066 326 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Pdlim4P70271 330 aa12.35□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Wipf3P0C7L0 485 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Defa23Q5G866 93 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Znrf2Q71FD5 238 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Shisal1Q0VBP7 198 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Vmn1r235Q8R297 328 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Ptrh2Q8R2Y8 181 aaKnown RBP12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Sh3bgrl3Q91VW3 93 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Srd5a2Q99N99 254 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Necap2Q9D1J1 266 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 LenepQ9WVB6 61 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Defa2P28309 93 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 CirbpP60824 172 aaKnown RBP12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Tm4sf20Q9CQY8 226 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Trpm7Q923J1 1863 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Gm14443A2ARX0 610 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Gm20403G3UYB0 123 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Pilrb2Q2YFS1 225 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Prelid3aQ8VE85 172 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Hdgfl3Q9JMG7 202 aa12.34□□□□□ -0.43
Pcdha1-201ENSMUST00000070797 Ighv5-16A0A0B4J1P4 117 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Dcaf10A2AKB9 566 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Fam19a2Q7TPG7 131 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Tspoap1Q7TNF8 1846 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 E030025P04RikA2A6V5 185 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Gsx1P31315 261 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Gfra1P97785 468 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Defa-rs10Q64263 91 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Olfr975Q8VG91 310 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Espl1P60330 2118 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Q3U1D9 316 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Vkorc1l1Q6TEK5 176 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Olfr476Q8VGI4 310 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Plpp2Q9DAX2 276 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Gnb1lQ9EQ15 326 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Dkk2Q9QYZ8 259 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Npc2Q9Z0J0 149 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Fam53aE9PV82 402 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Gfra3O35118 397 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Atp5g2P56383 146 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Cdcp2Q8BQH6 427 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 P2ry6Q9ERK9 328 aa12.33□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Bak1O08734 209 aa12.32□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Pax9P47242 342 aa12.32□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Fgf11P70378 225 aa12.32□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Dnajb12Q9QYI4 376 aaKnown RBP12.32□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Gm4791J3QQ14 102 aa12.32□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Bricd5Q8BV89 174 aa12.32□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Gpr35Q9ES90 307 aa12.32□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Col4a3Q9QZS0 1669 aa12.32□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Olfr1402Q8VET1 320 aa12.32□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Q9DAS2 200 aa12.32□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Pfn1P62962 140 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Prr30Q9D9B7 401 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Ighv14-2A0A075B5R7 117 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Tpsb2P21845 276 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Olfr875Q7TRE5 310 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Pnrc2Q9CR73 140 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Gm4744D3Z3S5 154 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Efnb3O35393 340 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Psg25Q497W1 475 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 RetnlgQ8K426 117 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Avpi1Q9D7H4 142 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Cryba2Q9JJV1 197 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Tp53bp1P70399 1969 aa12.31□□□□□ -0.44
Pcdha1-201ENSMUST00000070797 Defa-rs12P50716 91 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms