RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Tnfaip6O08859 275 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Bmpr1bP36898 502 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Id3P41133 119 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr1465Q7TQR2 307 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr1246Q7TQZ6 314 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Rnf151Q9CQ29 239 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gng10Q9CXP8 68 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gar1Q9CY66 231 aaKnown RBP8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Fxyd4Q9D2W0 88 aa8.06□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Iglv1A0A075B663 117 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Vmn1r232A2RTT5 351 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm6096D3YTY6 151 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Zfp976E9Q981 636 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm3072F6SKY8 209 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm17654F7AXR3 209 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Efnb3O35393 340 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ssty1P13675 232 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Arl14eplQ3UKZ7 152 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Q8C708 225 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tusc5Q8C838 173 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr1404Q8VGE1 313 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Psmb2Q9R1P3 201 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 AcacbE9Q4Z2 2448 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Igkv5-37A0A140T8N4 115 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm5741B2RVA4 72 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Inafm1E9PV59 130 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tmem139E9PX92 214 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm12830F6XVH0 157 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 P01655 112 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ccl2P10148 148 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Rab24P35290 203 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 SstP60041 116 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Zic3Q62521 466 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Q8BG31 207 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr476Q8VGI4 310 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Cotl1Q9CQI6 142 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 CcsQ9WU84 274 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gpr132Q9Z282 382 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm6904E9PVF1 202 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 RhodP97348 210 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Il22ra2Q80XF5 230 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Zfp799Q8BHK4 648 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Wfdc21Q8BTE6 63 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Nrn1Q8CFV4 142 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Vmn1r222Q8R269 308 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr1269Q8VEZ2 309 aa8.05□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Trbv1A0A0B4J1G7 116 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr779E9PUS9 130 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ucp1P12242 307 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Lgals1P16045 135 aaKnown RBP8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Hes1P35428 282 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Pfn1P62962 140 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ap5s1Q9D742 170 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Mpdu1Q9R0Q9 247 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 LenepQ9WVB6 61 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Vmn1r149E9PWL6 307 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Vmn1r101E9Q365 307 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm28305F6U473 122 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm10130F6ZHM5 101 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Vmn1r158G3UY92 307 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 P18530 117 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Rom1P32958 351 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Dlx1Q64317 255 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr1178Q7TR20 323 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Kazald1Q8BJ66 313 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tmem11Q8BK08 190 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Cxcr6Q9EQ16 351 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 P2ry6Q9ERK9 328 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Cd200r1Q9ES57 326 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Slurp1Q9Z0K7 110 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ighv1-18A0A0A6YXN4 117 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr1118A0A0J9YUE7 307 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm6993A0A1W2P738 69 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm44501A8R0T9 150 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gcm1P70348 436 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tnfsf15Q5UBV8 252 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 SelplgQ62170 397 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm9945Q8BNZ3 91 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr1242Q8VGM6 306 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 VsirQ9D659 308 aa8.04□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr912A0A1L1SSS5 310 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm15056F6ZR08 88 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Bet1lO35153 111 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 P01789 122 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 P04212 136 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr127Q8VF25 323 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Vmn1r61W4VSP5 300 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr978E9Q985 311 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Cd79bP15530 228 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 BsgP18572 389 aaKnown RBP8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Zfp36l1P23950 338 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Sult1a1P52840 291 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr996Q7TRA0 314 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ifna14Q810G3 189 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr1262Q8VGN2 304 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tnfrsf13cQ9D8D0 175 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Ighv4-1A0A075B5R5 116 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm3045A0A1D5RMA1 209 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr920E9Q413 310 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Cd3eP22646 189 aa8.03□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms