RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Heatr5aQ5PRF0 2038 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Trav16A0A075B653 116 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Tcrg-V4A0A0B4J1J8 138 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Igkv12-89A0A0G2JGW8 112 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Rab33bO35963 229 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Xaf1Q5NBU8 273 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 CrhQ8CIT0 187 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 TfpiO54819 306 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 KncnQ307W7 124 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Wdr83osQ6ZWX0 106 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr1434Q7TQR9 312 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Fbxo46Q8BG80 603 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Lrtm1Q8BXQ3 356 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Rbm14Q8C2Q3 669 aaKnown RBP10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Nit1Q8VDK1 323 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 H2afb1Q9CQ70 111 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gpa33Q9JKA5 319 aa10.6□□□□□ -0.71
Msh6-201ENSMUST00000005503 Ighv9-4A0A0A6YWH6 117 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Trbv12-2A0A0B4J1H1 124 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Trav23A0A0G2JG17 115 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr1245A0A1L1SQJ6 307 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Rpl8P62918 257 aaKnown RBP10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Hist2h2beQ64524 126 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Duxbl2Q7TNE6 350 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr823Q7TRH2 315 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr824Q8VFU4 315 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr476Q8VGI4 310 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Fam162bQ9CX19 157 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Ighv7-4A0A0A6YXL5 121 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm13030A2APQ6 143 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm21732J3QM79 361 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm21921J3QNB5 361 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Il3raP26952 396 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Cd81P35762 236 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Atp5g2P56383 146 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 CebpdQ00322 268 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr1246Q7TQZ6 314 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Gm9945Q8BNZ3 91 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Scrt1Q99M85 348 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr961Q9EQ84 314 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Supt4h1bQ9Z199 117 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Col4a6B1AVK5 1691 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Cd59bP58019 129 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 G0s2Q61585 103 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr1431Q8VF59 312 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Mnx1Q9QZW9 404 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Col6a4A2AX52 2309 aa10.59□□□□□ -0.71
Msh6-201ENSMUST00000005503 Olfr1098A2AVB0 315 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Olfr918E9PVZ7 325 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Acrv1P50289 261 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 H2al1nQ497L1 109 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Cd52Q64389 74 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Trav7-4A0A075B6C1 113 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Zfp456B2RUK9 458 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 P04945 108 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 V1rd19Q3KNP5 305 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Jsrp1Q3MI48 332 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Trav7d-4Q5R1H9 113 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Ccl8Q9Z121 97 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 AsipQ03288 131 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Gm10842Q3U587 122 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Zic3Q62521 466 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Olfr779E9PUS9 130 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Foxf2O54743 446 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Fam222bQ6P539 562 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Olfr25Q7TRD6 313 aa10.58□□□□□ -0.72
Msh6-201ENSMUST00000005503 Ighv7-3A0A075B5R2 120 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Igkv4-51A0N8I8 119 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Olfr715bE9Q725 315 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Onecut1O08755 465 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Efnb3O35393 340 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Sod1P08228 154 aaKnown RBP10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Timp3P39876 211 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Olfr218E9PWV2 313 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Gtf2h5Q8K2X8 71 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Gab2Q9Z1S8 665 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Nav2E9Q842 2432 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Sdk2Q6V4S5 2176 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Trav6-1A0A075B5Z8 112 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Gm45871A0A1B0GRI9 540 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 MyadmO35682 320 aaKnown RBP10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 P01788 123 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 P01790 122 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Ccl2P10148 148 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Gpbar1Q80SS6 329 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Olfr1441Q8VFV3 318 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Mien1Q9CQ86 115 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Tctex1d1Q9D5I4 173 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Znf22Q9ERU3 237 aa10.57□□□□□ -0.72
Msh6-201ENSMUST00000005503 Lnp1A0A1B0GSK3 178 aa10.56□□□□□ -0.72
Msh6-201ENSMUST00000005503 Ca11O70354 328 aa10.56□□□□□ -0.72
Msh6-201ENSMUST00000005503 Kazald1Q8BJ66 313 aa10.56□□□□□ -0.72
Msh6-201ENSMUST00000005503 Olfr958Q8VEY3 312 aa10.56□□□□□ -0.72
Msh6-201ENSMUST00000005503 Cd200r1Q9ES57 326 aa10.56□□□□□ -0.72
Msh6-201ENSMUST00000005503 Fgf5P15656 264 aa10.56□□□□□ -0.72
Msh6-201ENSMUST00000005503 Hoxd11P23813 323 aa10.56□□□□□ -0.72
Msh6-201ENSMUST00000005503 Fam206aQ80ZQ9 193 aaKnown RBP10.56□□□□□ -0.72
Msh6-201ENSMUST00000005503 Znf641Q8BZ34 422 aa10.56□□□□□ -0.72
Msh6-201ENSMUST00000005503 Olfr1256Q8VGP1 306 aa10.56□□□□□ -0.72
Msh6-201ENSMUST00000005503 Olfr33Q8VGX7 318 aa10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms