RNA–Protein interactions for RNA: ENST00000601549.1

KCNN4-208, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 3

Gene KCNN4, Length 1,093 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-208ENST00000601549 GTSF1Q8WW33 167 aa13.12□□□□□ -0.31
KCNN4-208ENST00000601549 SPATA25Q9BR10 227 aa13.12□□□□□ -0.31
KCNN4-208ENST00000601549 A0A1B0GUT8 65 aa13.11□□□□□ -0.31
KCNN4-208ENST00000601549 GRIFINA4D1Z8 144 aa13.11□□□□□ -0.31
KCNN4-208ENST00000601549 ARMS2P0C7Q2 107 aa13.11□□□□□ -0.31
KCNN4-208ENST00000601549 RNASE3P12724 160 aaKnown RBP13.11□□□□□ -0.31
KCNN4-208ENST00000601549 DAZ2Q13117 558 aaKnown RBP13.11□□□□□ -0.31
KCNN4-208ENST00000601549 SYT8Q8NBV8 401 aa13.11□□□□□ -0.31
KCNN4-208ENST00000601549 NUP35Q8NFH5 326 aa13.11□□□□□ -0.31
KCNN4-208ENST00000601549 OR11H2Q8NH07 326 aa13.11□□□□□ -0.31
KCNN4-208ENST00000601549 PHLDA3Q9Y5J5 127 aa13.11□□□□□ -0.31
KCNN4-208ENST00000601549 X6R8D5 127 aa13.11□□□□□ -0.31
KCNN4-208ENST00000601549 TRBV24-1A0A075B6N3 115 aa13.1□□□□□ -0.31
KCNN4-208ENST00000601549 TEX48A0A1B0GUV7 120 aa13.1□□□□□ -0.31
KCNN4-208ENST00000601549 SNURFLB1AK76 121 aa13.1□□□□□ -0.31
KCNN4-208ENST00000601549 RIGQ13278 110 aa13.1□□□□□ -0.31
KCNN4-208ENST00000601549 LGALS9BQ3B8N2 356 aa13.1□□□□□ -0.31
KCNN4-208ENST00000601549 ZFP82Q8N141 532 aa13.1□□□□□ -0.31
KCNN4-208ENST00000601549 C11orf72Q8NBR9 251 aa13.1□□□□□ -0.31
KCNN4-208ENST00000601549 B9D2Q9BPU9 175 aa13.1□□□□□ -0.31
KCNN4-208ENST00000601549 TM2D3Q9BRN9 247 aa13.1□□□□□ -0.31
KCNN4-208ENST00000601549 H3BVH4 76 aa13.09□□□□□ -0.31
KCNN4-208ENST00000601549 NXPH4O95158 308 aa13.09□□□□□ -0.31
KCNN4-208ENST00000601549 HTN1P15515 57 aa13.09□□□□□ -0.31
KCNN4-208ENST00000601549 LYZL1Q6UWQ5 148 aa13.09□□□□□ -0.31
KCNN4-208ENST00000601549 IL17DQ8TAD2 202 aa13.09□□□□□ -0.31
KCNN4-208ENST00000601549 OVOL2Q9BRP0 275 aa13.09□□□□□ -0.31
KCNN4-208ENST00000601549 M0R2P5 195 aa13.08□□□□□ -0.32
KCNN4-208ENST00000601549 GZMBP10144 247 aa13.08□□□□□ -0.32
KCNN4-208ENST00000601549 KRTAP17-1Q9BYP8 105 aa13.08□□□□□ -0.32
KCNN4-208ENST00000601549 ZMAT4Q9H898 229 aa13.08□□□□□ -0.32
KCNN4-208ENST00000601549 MDFICQ9P1T7 246 aa13.08□□□□□ -0.32
KCNN4-208ENST00000601549 TIMM8BQ9Y5J9 83 aaPredicted RBP13.08□□□□□ -0.32
KCNN4-208ENST00000601549 NHLRC4P0CG21 123 aaPredicted RBP13.07□□□□□ -0.32
KCNN4-208ENST00000601549 ELOBQ15370 118 aa13.07□□□□□ -0.32
KCNN4-208ENST00000601549 SPANXN1Q5VSR9 72 aa13.07□□□□□ -0.32
KCNN4-208ENST00000601549 PGLYRP4Q96LB8 373 aa13.07□□□□□ -0.32
KCNN4-208ENST00000601549 TPPP3Q9BW30 176 aa13.07□□□□□ -0.32
KCNN4-208ENST00000601549 LYRM9A8MSI8 78 aa13.06□□□□□ -0.32
KCNN4-208ENST00000601549 CIDEAO60543 219 aa13.06□□□□□ -0.32
KCNN4-208ENST00000601549 TRGC1P0CF51 173 aa13.06□□□□□ -0.32
KCNN4-208ENST00000601549 AZU1P20160 251 aa13.06□□□□□ -0.32
KCNN4-208ENST00000601549 FAM3BP58499 235 aaPredicted RBP13.06□□□□□ -0.32
KCNN4-208ENST00000601549 SMIM15Q7Z3B0 74 aa13.06□□□□□ -0.32
KCNN4-208ENST00000601549 SBSPONQ8IVN8 264 aa13.06□□□□□ -0.32
KCNN4-208ENST00000601549 RASL10AQ92737 203 aa13.06□□□□□ -0.32
KCNN4-208ENST00000601549 C11orf68Q9H3H3 251 aaKnown RBP13.06□□□□□ -0.32
KCNN4-208ENST00000601549 GSN-AS1Q9NRJ2 163 aa13.06□□□□□ -0.32
KCNN4-208ENST00000601549 HBBP68871 147 aa13.05□□□□□ -0.32
KCNN4-208ENST00000601549 CBLN2Q8IUK8 224 aa13.05□□□□□ -0.32
KCNN4-208ENST00000601549 Q8NAQ8 132 aa13.05□□□□□ -0.32
KCNN4-208ENST00000601549 YPEL4Q96NS1 127 aa13.05□□□□□ -0.32
KCNN4-208ENST00000601549 URGCP-MRPS24S4R325 110 aa13.05□□□□□ -0.32
KCNN4-208ENST00000601549 A0A1B0GXF2 115 aa13.04□□□□□ -0.32
KCNN4-208ENST00000601549 SPINK4O60575 86 aa13.04□□□□□ -0.32
KCNN4-208ENST00000601549 TMEM88Q6PEY1 159 aa13.04□□□□□ -0.32
KCNN4-208ENST00000601549 GATD1Q8NB37 220 aa13.04□□□□□ -0.32
KCNN4-208ENST00000601549 C18orf15Q96N68 181 aa13.04□□□□□ -0.32
KCNN4-208ENST00000601549 PLAC8L1A1L4L8 177 aa13.03□□□□□ -0.32
KCNN4-208ENST00000601549 A8MWV9 139 aa13.03□□□□□ -0.32
KCNN4-208ENST00000601549 MT-ND6P03923 174 aa13.03□□□□□ -0.32
KCNN4-208ENST00000601549 NTF3P20783 257 aa13.03□□□□□ -0.32
KCNN4-208ENST00000601549 ZNF876PQ49A33 203 aa13.03□□□□□ -0.32
KCNN4-208ENST00000601549 OR10AG1Q8NH19 301 aa13.03□□□□□ -0.32
KCNN4-208ENST00000601549 FRZBQ92765 325 aa13.03□□□□□ -0.32
KCNN4-208ENST00000601549 AP1S3Q96PC3 154 aa13.03□□□□□ -0.32
KCNN4-208ENST00000601549 IGHV4-28A0A0C4DH34 117 aa13.02□□□□□ -0.33
KCNN4-208ENST00000601549 TWIST1Q15672 202 aa13.02□□□□□ -0.33
KCNN4-208ENST00000601549 FAM210BQ96KR6 192 aa13.02□□□□□ -0.33
KCNN4-208ENST00000601549 M0R381 172 aa13.01□□□□□ -0.33
KCNN4-208ENST00000601549 GNB1LQ9BYB4 327 aa13.01□□□□□ -0.33
KCNN4-208ENST00000601549 TMEM191AQ9H0A3 160 aa13.01□□□□□ -0.33
KCNN4-208ENST00000601549 RHODO00212 210 aa13□□□□□ -0.33
KCNN4-208ENST00000601549 SPART-AS1P0CW21 52 aa13□□□□□ -0.33
KCNN4-208ENST00000601549 LINC00612Q8N6U2 182 aa13□□□□□ -0.33
KCNN4-208ENST00000601549 NOP10Q9NPE3 64 aaKnown RBP13□□□□□ -0.33
KCNN4-208ENST00000601549 SCO1O75880 301 aa12.99□□□□□ -0.33
KCNN4-208ENST00000601549 HLA-DQA1P01909 254 aa12.99□□□□□ -0.33
KCNN4-208ENST00000601549 PRM2P04554 102 aa12.99□□□□□ -0.33
KCNN4-208ENST00000601549 SMIM17P0DL12 118 aa12.99□□□□□ -0.33
KCNN4-208ENST00000601549 DMRTA1Q5VZB9 504 aa12.99□□□□□ -0.33
KCNN4-208ENST00000601549 MRPL54Q6P161 138 aaKnown RBP12.99□□□□□ -0.33
KCNN4-208ENST00000601549 ZFP2Q6ZN57 461 aa12.99□□□□□ -0.33
KCNN4-208ENST00000601549 TRGV1A0A0A0MS02 117 aa12.98□□□□□ -0.33
KCNN4-208ENST00000601549 TGIF2-C20orf24A0A0A6YYL0 155 aa12.98□□□□□ -0.33
KCNN4-208ENST00000601549 COLCA2A8K830 154 aa12.98□□□□□ -0.33
KCNN4-208ENST00000601549 DPH3P1Q9H4G8 78 aa12.98□□□□□ -0.33
KCNN4-208ENST00000601549 DKK2Q9UBU2 259 aa12.98□□□□□ -0.33
KCNN4-208ENST00000601549 TRAV4A0A0B4J268 109 aa12.96□□□□□ -0.33
KCNN4-208ENST00000601549 RS1O15537 224 aa12.96□□□□□ -0.33
KCNN4-208ENST00000601549 CAMPP49913 170 aa12.96□□□□□ -0.33
KCNN4-208ENST00000601549 RAB5AP20339 215 aa12.95□□□□□ -0.34
KCNN4-208ENST00000601549 EMP1P54849 157 aa12.95□□□□□ -0.34
KCNN4-208ENST00000601549 FAM222AQ5U5X8 452 aa12.95□□□□□ -0.34
KCNN4-208ENST00000601549 RETNQ9HD89 108 aa12.95□□□□□ -0.34
KCNN4-208ENST00000601549 MRPL16Q9NX20 251 aaKnown RBP12.95□□□□□ -0.34
KCNN4-208ENST00000601549 MSRB1Q9NZV6 116 aa12.95□□□□□ -0.34
KCNN4-208ENST00000601549 TRGV2A0A075B6R0 118 aa12.94□□□□□ -0.34
KCNN4-208ENST00000601549 MUC21A0A0G2JKD1 596 aa12.94□□□□□ -0.34
KCNN4-208ENST00000601549 MUC21A0A140T8X8 626 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms