RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CIDEAO60543 219 aa9.35□□□□□ -0.91
TRIM47-202ENST00000585333 CTRLP40313 264 aa9.35□□□□□ -0.91
TRIM47-202ENST00000585333 SPANXN1Q5VSR9 72 aa9.35□□□□□ -0.91
TRIM47-202ENST00000585333 SSBP4Q9BWG4 385 aaPredicted RBP9.35□□□□□ -0.91
TRIM47-202ENST00000585333 X6R8D5 127 aa9.35□□□□□ -0.91
TRIM47-202ENST00000585333 PRKDCP78527 4128 aaKnown RBP9.34□□□□□ -0.91
TRIM47-202ENST00000585333 HIGD1CA8MV81 97 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 H3BVH4 76 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 GNRH2O43555 120 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 ARMS2P0C7Q2 107 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 IGLC6P0CF74 106 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 RIGQ13278 110 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 COX19Q49B96 90 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 ATP5L2Q7Z4Y8 100 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 C9orf85Q96MD7 179 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 TPPP3Q9BW30 176 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 SMCO4Q9NRQ5 59 aa9.34□□□□□ -0.91
TRIM47-202ENST00000585333 IGHV4-28A0A0C4DH34 117 aa9.33□□□□□ -0.92
TRIM47-202ENST00000585333 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
TRIM47-202ENST00000585333 GRIFINA4D1Z8 144 aa9.33□□□□□ -0.92
TRIM47-202ENST00000585333 SPART-AS1P0CW21 52 aa9.33□□□□□ -0.92
TRIM47-202ENST00000585333 Q8NAQ8 132 aa9.33□□□□□ -0.92
TRIM47-202ENST00000585333 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
TRIM47-202ENST00000585333 CNFNQ9BYD5 112 aa9.33□□□□□ -0.92
TRIM47-202ENST00000585333 SCRT2Q9NQ03 307 aa9.33□□□□□ -0.92
TRIM47-202ENST00000585333 GSN-AS1Q9NRJ2 163 aa9.33□□□□□ -0.92
TRIM47-202ENST00000585333 A8MWV9 139 aa9.32□□□□□ -0.92
TRIM47-202ENST00000585333 RNASE3P12724 160 aaKnown RBP9.32□□□□□ -0.92
TRIM47-202ENST00000585333 RASL11AQ6T310 242 aa9.32□□□□□ -0.92
TRIM47-202ENST00000585333 AP1S3Q96PC3 154 aa9.32□□□□□ -0.92
TRIM47-202ENST00000585333 MDFICQ9P1T7 246 aa9.32□□□□□ -0.92
TRIM47-202ENST00000585333 TGP01266 2768 aa9.32□□□□□ -0.92
TRIM47-202ENST00000585333 IGHV4-4A0A075B6R2 117 aa9.31□□□□□ -0.92
TRIM47-202ENST00000585333 SPINK4O60575 86 aa9.31□□□□□ -0.92
TRIM47-202ENST00000585333 NXPH4O95158 308 aa9.31□□□□□ -0.92
TRIM47-202ENST00000585333 SMIM17P0DL12 118 aa9.31□□□□□ -0.92
TRIM47-202ENST00000585333 ZNF876PQ49A33 203 aa9.31□□□□□ -0.92
TRIM47-202ENST00000585333 LYZL1Q6UWQ5 148 aa9.31□□□□□ -0.92
TRIM47-202ENST00000585333 Q6ZQT7 251 aa9.31□□□□□ -0.92
TRIM47-202ENST00000585333 IL17DQ8TAD2 202 aa9.31□□□□□ -0.92
TRIM47-202ENST00000585333 RASL10AQ92737 203 aa9.31□□□□□ -0.92
TRIM47-202ENST00000585333 TRGV1A0A0A0MS02 117 aa9.3□□□□□ -0.92
TRIM47-202ENST00000585333 RHODO00212 210 aa9.3□□□□□ -0.92
TRIM47-202ENST00000585333 GZMBP10144 247 aa9.3□□□□□ -0.92
TRIM47-202ENST00000585333 AZU1P20160 251 aa9.3□□□□□ -0.92
TRIM47-202ENST00000585333 NUP35Q8NFH5 326 aa9.3□□□□□ -0.92
TRIM47-202ENST00000585333 GTSF1Q8WW33 167 aa9.3□□□□□ -0.92
TRIM47-202ENST00000585333 PGLYRP4Q96LB8 373 aa9.3□□□□□ -0.92
TRIM47-202ENST00000585333 C18orf15Q96N68 181 aa9.3□□□□□ -0.92
TRIM47-202ENST00000585333 NOP10Q9NPE3 64 aaKnown RBP9.3□□□□□ -0.92
TRIM47-202ENST00000585333 TRGV2A0A075B6R0 118 aa9.29□□□□□ -0.92
TRIM47-202ENST00000585333 M0R381 172 aa9.29□□□□□ -0.92
TRIM47-202ENST00000585333 EMP1P54849 157 aa9.29□□□□□ -0.92
TRIM47-202ENST00000585333 HBBP68871 147 aa9.29□□□□□ -0.92
TRIM47-202ENST00000585333 TWIST1Q15672 202 aa9.29□□□□□ -0.92
TRIM47-202ENST00000585333 DAD1P61803 113 aa9.28□□□□□ -0.92
TRIM47-202ENST00000585333 OR10AG1Q8NH19 301 aa9.28□□□□□ -0.92
TRIM47-202ENST00000585333 FRZBQ92765 325 aa9.28□□□□□ -0.92
TRIM47-202ENST00000585333 RETNQ9HD89 108 aa9.28□□□□□ -0.92
TRIM47-202ENST00000585333 DKK2Q9UBU2 259 aa9.28□□□□□ -0.92
TRIM47-202ENST00000585333 TRBV24-1A0A075B6N3 115 aa9.27□□□□□ -0.93
TRIM47-202ENST00000585333 TRAV4A0A0B4J268 109 aa9.27□□□□□ -0.93
TRIM47-202ENST00000585333 PLAC8L1A1L4L8 177 aa9.27□□□□□ -0.93
TRIM47-202ENST00000585333 MT-ND6P03923 174 aa9.27□□□□□ -0.93
TRIM47-202ENST00000585333 NTF3P20783 257 aa9.27□□□□□ -0.93
TRIM47-202ENST00000585333 SLAQ13239 276 aa9.27□□□□□ -0.93
TRIM47-202ENST00000585333 FAM222AQ5U5X8 452 aa9.27□□□□□ -0.93
TRIM47-202ENST00000585333 ZFP2Q6ZN57 461 aa9.27□□□□□ -0.93
TRIM47-202ENST00000585333 U3KQK5 164 aa9.27□□□□□ -0.93
TRIM47-202ENST00000585333 DNAH3Q8TD57 4116 aa9.27□□□□□ -0.93
TRIM47-202ENST00000585333 FAM3BP58499 235 aaPredicted RBP9.26□□□□□ -0.93
TRIM47-202ENST00000585333 ZNF575Q86XF7 245 aa9.26□□□□□ -0.93
TRIM47-202ENST00000585333 LINC00612Q8N6U2 182 aa9.26□□□□□ -0.93
TRIM47-202ENST00000585333 OR4C5Q8NGB2 326 aa9.26□□□□□ -0.93
TRIM47-202ENST00000585333 DPH3P1Q9H4G8 78 aa9.26□□□□□ -0.93
TRIM47-202ENST00000585333 URGCP-MRPS24S4R325 110 aa9.26□□□□□ -0.93
TRIM47-202ENST00000585333 A0A0J9YWU9 116 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 GAGE12BA1L429 117 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 H7C1H1 209 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 GAGE7O76087 117 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 HLA-DQA1P01909 254 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 ATP5G1P05496 136 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 GAGE12FP0CL80 117 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 GAGE12GP0CL81 117 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 GAGE12IP0CL82 117 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 DMRTA1Q5VZB9 504 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 C11orf45Q8TAV5 145 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 TMEM191AQ9H0A3 160 aa9.25□□□□□ -0.93
TRIM47-202ENST00000585333 MRPL16Q9NX20 251 aaKnown RBP9.25□□□□□ -0.93
TRIM47-202ENST00000585333 RS1O15537 224 aa9.24□□□□□ -0.93
TRIM47-202ENST00000585333 PPP1R17O96001 155 aa9.24□□□□□ -0.93
TRIM47-202ENST00000585333 PRM2P04554 102 aa9.24□□□□□ -0.93
TRIM47-202ENST00000585333 DEFB130BP0DP73 79 aa9.24□□□□□ -0.93
TRIM47-202ENST00000585333 DEFB130AP0DP74 79 aa9.24□□□□□ -0.93
TRIM47-202ENST00000585333 ELOBQ15370 118 aa9.24□□□□□ -0.93
TRIM47-202ENST00000585333 MRPL54Q6P161 138 aaKnown RBP9.24□□□□□ -0.93
TRIM47-202ENST00000585333 ATRAIDQ6UW56 229 aa9.24□□□□□ -0.93
TRIM47-202ENST00000585333 Q6ZTI0 123 aa9.24□□□□□ -0.93
TRIM47-202ENST00000585333 A0A1B0GXF2 115 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms