RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 TPPP3Q9BW30 176 aa12.06□□□□□ -0.48
CDK5RAP3-230ENST00000584042 MDFICQ9P1T7 246 aa12.06□□□□□ -0.48
CDK5RAP3-230ENST00000584042 URGCP-MRPS24S4R325 110 aa12.06□□□□□ -0.48
CDK5RAP3-230ENST00000584042 PRM2P04554 102 aa12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 AZU1P20160 251 aa12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 FAM3BP58499 235 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 CACNG7P62955 275 aa12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 ELOBQ15370 118 aa12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 WDR73Q6P4I2 378 aa12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 YPEL4Q96NS1 127 aa12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 SPATA25Q9BR10 227 aa12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 TM2D3Q9BRN9 247 aa12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 OVOL2Q9BRP0 275 aa12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 SPXQ9BT56 116 aa12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 PHLDA3Q9Y5J5 127 aa12.05□□□□□ -0.48
CDK5RAP3-230ENST00000584042 TRBV24-1A0A075B6N3 115 aa12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 IGHV4-4A0A075B6R2 117 aa12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 A0A1B0GUT8 65 aa12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 PLAC8L1A1L4L8 177 aa12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 SNURFLB1AK76 121 aa12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 SBSPONQ8IVN8 264 aa12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 ZFP82Q8N141 532 aa12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 Q8NAQ8 132 aa12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 OR10AG1Q8NH19 301 aa12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 PTH2Q96A98 100 aa12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 GSN-AS1Q9NRJ2 163 aa12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 TIMM8BQ9Y5J9 83 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-230ENST00000584042 PIK3CD-AS1Q5SR53 167 aa12.03□□□□□ -0.48
CDK5RAP3-230ENST00000584042 B9D2Q9BPU9 175 aa12.03□□□□□ -0.48
CDK5RAP3-230ENST00000584042 NDUFAF3Q9BU61 184 aa12.03□□□□□ -0.48
CDK5RAP3-230ENST00000584042 RETNQ9HD89 108 aa12.03□□□□□ -0.48
CDK5RAP3-230ENST00000584042 IGHV4-28A0A0C4DH34 117 aa12.02□□□□□ -0.49
CDK5RAP3-230ENST00000584042 A0A1B0GW15 77 aa12.02□□□□□ -0.49
CDK5RAP3-230ENST00000584042 A0A1B0GXF2 115 aa12.02□□□□□ -0.49
CDK5RAP3-230ENST00000584042 M0R2P5 195 aa12.02□□□□□ -0.49
CDK5RAP3-230ENST00000584042 DAZ2Q13117 558 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-230ENST00000584042 RIGQ13278 110 aa12.02□□□□□ -0.49
CDK5RAP3-230ENST00000584042 SPANXN1Q5VSR9 72 aa12.02□□□□□ -0.49
CDK5RAP3-230ENST00000584042 RASL11AQ6T310 242 aa12.02□□□□□ -0.49
CDK5RAP3-230ENST00000584042 SYT8Q8NBV8 401 aa12.02□□□□□ -0.49
CDK5RAP3-230ENST00000584042 MUC4Q99102 2169 aa12.02□□□□□ -0.49
CDK5RAP3-230ENST00000584042 S100A8P05109 93 aa12.01□□□□□ -0.49
CDK5RAP3-230ENST00000584042 HBBP68871 147 aa12.01□□□□□ -0.49
CDK5RAP3-230ENST00000584042 MRPL54Q6P161 138 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-230ENST00000584042 C11orf68Q9H3H3 251 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-230ENST00000584042 DNAH9Q9NYC9 4486 aa12.01□□□□□ -0.49
CDK5RAP3-230ENST00000584042 SPINK4O60575 86 aa12□□□□□ -0.49
CDK5RAP3-230ENST00000584042 DEFA6Q01524 100 aa12□□□□□ -0.49
CDK5RAP3-230ENST00000584042 LGALS9BQ3B8N2 356 aa12□□□□□ -0.49
CDK5RAP3-230ENST00000584042 GATD1Q8NB37 220 aa12□□□□□ -0.49
CDK5RAP3-230ENST00000584042 HUWE1Q7Z6Z7 4374 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-230ENST00000584042 TGIF2-C20orf24A0A0A6YYL0 155 aa11.99□□□□□ -0.49
CDK5RAP3-230ENST00000584042 MUC21A0A0G2JKD1 596 aa11.99□□□□□ -0.49
CDK5RAP3-230ENST00000584042 MUC21A0A140T8X8 626 aa11.99□□□□□ -0.49
CDK5RAP3-230ENST00000584042 M0R381 172 aa11.99□□□□□ -0.49
CDK5RAP3-230ENST00000584042 TRGC1P0CF51 173 aa11.99□□□□□ -0.49
CDK5RAP3-230ENST00000584042 COX19Q49B96 90 aa11.99□□□□□ -0.49
CDK5RAP3-230ENST00000584042 AP1S3Q96PC3 154 aa11.99□□□□□ -0.49
CDK5RAP3-230ENST00000584042 NTF3P20783 257 aa11.98□□□□□ -0.49
CDK5RAP3-230ENST00000584042 TWIST1Q15672 202 aa11.98□□□□□ -0.49
CDK5RAP3-230ENST00000584042 ZNF876PQ49A33 203 aa11.98□□□□□ -0.49
CDK5RAP3-230ENST00000584042 RASL10AQ92737 203 aa11.98□□□□□ -0.49
CDK5RAP3-230ENST00000584042 FAM210BQ96KR6 192 aa11.98□□□□□ -0.49
CDK5RAP3-230ENST00000584042 ZMAT4Q9H898 229 aa11.98□□□□□ -0.49
CDK5RAP3-230ENST00000584042 NOP10Q9NPE3 64 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-230ENST00000584042 TEX48A0A1B0GUV7 120 aa11.97□□□□□ -0.49
CDK5RAP3-230ENST00000584042 LYRM9A8MSI8 78 aa11.97□□□□□ -0.49
CDK5RAP3-230ENST00000584042 DMRTA1Q5VZB9 504 aa11.97□□□□□ -0.49
CDK5RAP3-230ENST00000584042 LINC00612Q8N6U2 182 aa11.97□□□□□ -0.49
CDK5RAP3-230ENST00000584042 MRPL16Q9NX20 251 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-230ENST00000584042 MEGF8Q7Z7M0 2845 aa11.96□□□□□ -0.49
CDK5RAP3-230ENST00000584042 NBEAL2Q6ZNJ1 2754 aa11.96□□□□□ -0.49
CDK5RAP3-230ENST00000584042 TRGV1A0A0A0MS02 117 aa11.96□□□□□ -0.49
CDK5RAP3-230ENST00000584042 COLCA2A8K830 154 aa11.96□□□□□ -0.49
CDK5RAP3-230ENST00000584042 MSRB1Q9NZV6 116 aa11.96□□□□□ -0.49
CDK5RAP3-230ENST00000584042 PRKDCP78527 4128 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP3-230ENST00000584042 A8MWV9 139 aa11.95□□□□□ -0.5
CDK5RAP3-230ENST00000584042 HLA-DQA1P01909 254 aa11.95□□□□□ -0.5
CDK5RAP3-230ENST00000584042 MT-ND6P03923 174 aa11.95□□□□□ -0.5
CDK5RAP3-230ENST00000584042 CAMPP49913 170 aa11.95□□□□□ -0.5
CDK5RAP3-230ENST00000584042 EMP1P54849 157 aa11.95□□□□□ -0.5
CDK5RAP3-230ENST00000584042 Q6ZTI0 123 aa11.95□□□□□ -0.5
CDK5RAP3-230ENST00000584042 SMIM15Q7Z3B0 74 aa11.95□□□□□ -0.5
CDK5RAP3-230ENST00000584042 C18orf15Q96N68 181 aa11.95□□□□□ -0.5
CDK5RAP3-230ENST00000584042 TMEM191AQ9H0A3 160 aa11.95□□□□□ -0.5
CDK5RAP3-230ENST00000584042 DKK2Q9UBU2 259 aa11.95□□□□□ -0.5
CDK5RAP3-230ENST00000584042 SSTP61278 116 aa11.94□□□□□ -0.5
CDK5RAP3-230ENST00000584042 GNB1LQ9BYB4 327 aa11.94□□□□□ -0.5
CDK5RAP3-230ENST00000584042 DEFB4AO15263 64 aa11.93□□□□□ -0.5
CDK5RAP3-230ENST00000584042 NHLRC4P0CG21 123 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-230ENST00000584042 FAM222AQ5U5X8 452 aa11.93□□□□□ -0.5
CDK5RAP3-230ENST00000584042 TMEM136Q6ZRR5 245 aa11.93□□□□□ -0.5
CDK5RAP3-230ENST00000584042 DPH3P1Q9H4G8 78 aa11.93□□□□□ -0.5
CDK5RAP3-230ENST00000584042 NACAE9PAV3 2078 aa11.92□□□□□ -0.5
CDK5RAP3-230ENST00000584042 TRAV4A0A0B4J268 109 aa11.92□□□□□ -0.5
CDK5RAP3-230ENST00000584042 RHODO00212 210 aa11.92□□□□□ -0.5
CDK5RAP3-230ENST00000584042 RS1O15537 224 aa11.92□□□□□ -0.5
CDK5RAP3-230ENST00000584042 RAB5AP20339 215 aa11.92□□□□□ -0.5
CDK5RAP3-230ENST00000584042 EVI2AP22794 236 aa11.92□□□□□ -0.5
CDK5RAP3-230ENST00000584042 RAB4BP61018 213 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms