RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 TRAV2A0A0B4J234 112 aa9.87□□□□□ -0.83
CCDC187-201ENST00000563590 HERV-K104P63124 156 aa9.87□□□□□ -0.83
CCDC187-201ENST00000563590 PLEKHB2Q96CS7 222 aa9.87□□□□□ -0.83
CCDC187-201ENST00000563590 U3KQK5 164 aa9.87□□□□□ -0.83
CCDC187-201ENST00000563590 F8VRH5 84 aa9.87□□□□□ -0.83
CCDC187-201ENST00000563590 I3L2K1 104 aa9.87□□□□□ -0.83
CCDC187-201ENST00000563590 NDPQ00604 133 aa9.87□□□□□ -0.83
CCDC187-201ENST00000563590 TRBV6-1A0A0K0K1D8 114 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 TEX22C9J3V5 150 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 K7EIM0 57 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 HERVK_113P61574 105 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 ANKRD29Q8N6D5 301 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 MAPK1IP1LQ8NDC0 245 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 PHLDA3Q9Y5J5 127 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 DOPEY1Q5JWR5 2465 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 PAX8Q06710 450 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 BRD3OSQ6XYD6 125 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 LYPD1Q8N2G4 141 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 LINC00311Q8N616 119 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 RNF185Q96GF1 192 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 NPC2P61916 151 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 RAB1BQ9H0U4 201 aa9.86□□□□□ -0.83
CCDC187-201ENST00000563590 PSMG4Q5JS54 123 aa9.85□□□□□ -0.83
CCDC187-201ENST00000563590 Q6ZQT7 251 aa9.85□□□□□ -0.83
CCDC187-201ENST00000563590 TSPAN13O95857 204 aa9.85□□□□□ -0.83
CCDC187-201ENST00000563590 LGALS1P09382 135 aaKnown RBP9.85□□□□□ -0.83
CCDC187-201ENST00000563590 FAM74A4Q5TZK3 123 aa9.85□□□□□ -0.83
CCDC187-201ENST00000563590 KHDC1LQ5JSQ8 128 aa9.85□□□□□ -0.83
CCDC187-201ENST00000563590 RPL39LQ96EH5 51 aaKnown RBP9.85□□□□□ -0.83
CCDC187-201ENST00000563590 CDIP1Q9H305 208 aa9.85□□□□□ -0.83
CCDC187-201ENST00000563590 TCL1BO95988 128 aa9.84□□□□□ -0.83
CCDC187-201ENST00000563590 CDSNQ15517 529 aa9.84□□□□□ -0.83
CCDC187-201ENST00000563590 TRPT1Q86TN4 253 aaKnown RBP9.84□□□□□ -0.83
CCDC187-201ENST00000563590 TEN1Q86WV5 123 aa9.84□□□□□ -0.83
CCDC187-201ENST00000563590 C2orf66Q6UXQ4 117 aa9.84□□□□□ -0.83
CCDC187-201ENST00000563590 OR11H6Q8NGC7 330 aa9.84□□□□□ -0.83
CCDC187-201ENST00000563590 NTN5Q8WTR8 489 aaPredicted RBP9.84□□□□□ -0.83
CCDC187-201ENST00000563590 FLNCQ14315 2725 aa9.84□□□□□ -0.83
CCDC187-201ENST00000563590 CRYBG3Q68DQ2 2970 aa9.84□□□□□ -0.83
CCDC187-201ENST00000563590 CRYGBP07316 175 aa9.83□□□□□ -0.84
CCDC187-201ENST00000563590 LGALS3P17931 250 aaKnown RBP9.83□□□□□ -0.84
CCDC187-201ENST00000563590 C16orf92Q96LL3 132 aa9.83□□□□□ -0.84
CCDC187-201ENST00000563590 ERG28Q9UKR5 140 aa9.83□□□□□ -0.84
CCDC187-201ENST00000563590 BUB1B-PAK6H3BSN5 160 aa9.83□□□□□ -0.84
CCDC187-201ENST00000563590 DEFB1P60022 68 aa9.83□□□□□ -0.84
CCDC187-201ENST00000563590 TAL2Q16559 108 aa9.83□□□□□ -0.84
CCDC187-201ENST00000563590 MORN3Q6PF18 240 aaPredicted RBP9.83□□□□□ -0.84
CCDC187-201ENST00000563590 CLEC19AQ6UXS0 136 aa9.83□□□□□ -0.84
CCDC187-201ENST00000563590 GNLYP22749 145 aa9.83□□□□□ -0.84
CCDC187-201ENST00000563590 CFAP126Q5VTH2 177 aa9.83□□□□□ -0.84
CCDC187-201ENST00000563590 DUX5Q96PT3 197 aa9.83□□□□□ -0.84
CCDC187-201ENST00000563590 PRRC2AP48634 2157 aaKnown RBP9.83□□□□□ -0.84
CCDC187-201ENST00000563590 G3V318 75 aa9.82□□□□□ -0.84
CCDC187-201ENST00000563590 NBR2O15453 112 aa9.82□□□□□ -0.84
CCDC187-201ENST00000563590 SLC25A20O43772 301 aa9.82□□□□□ -0.84
CCDC187-201ENST00000563590 ZNF256Q9Y2P7 627 aaPredicted RBP9.82□□□□□ -0.84
CCDC187-201ENST00000563590 MRPS12O15235 138 aaKnown RBP9.82□□□□□ -0.84
CCDC187-201ENST00000563590 SMCPP49901 116 aaPredicted RBP9.82□□□□□ -0.84
CCDC187-201ENST00000563590 DPM3Q9P2X0 92 aa9.82□□□□□ -0.84
CCDC187-201ENST00000563590 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 TMEM262E9PQX1 116 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 GAGE7O76087 117 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 GAGE12FP0CL80 117 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 GAGE12GP0CL81 117 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 GAGE12IP0CL82 117 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 GAGE4Q13068 117 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 FHL3Q13643 280 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 C8orf31Q8N9H6 132 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 CELSR1Q9NYQ6 3014 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 SMIM2Q9BVW6 85 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 DCHS2Q6V1P9 2916 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 B9A039 149 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 CCDC179H3BU77 68 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 PRO0461Q9UI25 63 aa9.81□□□□□ -0.84
CCDC187-201ENST00000563590 TRBV7-3A0A075B6L6 115 aa9.8□□□□□ -0.84
CCDC187-201ENST00000563590 ADARB2-AS1A8MUL3 147 aa9.8□□□□□ -0.84
CCDC187-201ENST00000563590 SUMO2P61956 95 aaKnown RBP9.8□□□□□ -0.84
CCDC187-201ENST00000563590 PDE6HQ13956 83 aa9.8□□□□□ -0.84
CCDC187-201ENST00000563590 ORMDL2Q53FV1 153 aa9.8□□□□□ -0.84
CCDC187-201ENST00000563590 SHISA2Q6UWI4 295 aa9.8□□□□□ -0.84
CCDC187-201ENST00000563590 IGLC6P0CF74 106 aa9.8□□□□□ -0.84
CCDC187-201ENST00000563590 TRAV8-4A0A0B4J246 113 aa9.79□□□□□ -0.84
CCDC187-201ENST00000563590 SHISA9B4DS77 424 aa9.79□□□□□ -0.84
CCDC187-201ENST00000563590 AGPAT4-IT1Q9H0P7 198 aa9.79□□□□□ -0.84
CCDC187-201ENST00000563590 TRAV4A0A0B4J268 109 aa9.79□□□□□ -0.84
CCDC187-201ENST00000563590 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.79□□□□□ -0.84
CCDC187-201ENST00000563590 CARD19Q96LW7 228 aa9.79□□□□□ -0.84
CCDC187-201ENST00000563590 IGKV3D-20A0A0C4DH25 116 aa9.79□□□□□ -0.84
CCDC187-201ENST00000563590 PRB1P04280 392 aa9.79□□□□□ -0.84
CCDC187-201ENST00000563590 IFITM1P13164 125 aa9.79□□□□□ -0.84
CCDC187-201ENST00000563590 HIST2H2BDQ6DRA6 164 aa9.79□□□□□ -0.84
CCDC187-201ENST00000563590 DUSP14O95147 198 aaKnown RBP9.78□□□□□ -0.84
CCDC187-201ENST00000563590 RNASE4P34096 147 aaKnown RBP9.78□□□□□ -0.84
CCDC187-201ENST00000563590 FAM159AQ6UWV7 190 aa9.78□□□□□ -0.84
CCDC187-201ENST00000563590 C15orf53Q8NAA6 179 aa9.78□□□□□ -0.84
CCDC187-201ENST00000563590 TP53TG1Q9Y2A0 90 aa9.78□□□□□ -0.84
CCDC187-201ENST00000563590 A0A087WWL8 130 aa9.78□□□□□ -0.84
CCDC187-201ENST00000563590 TRAV12-3A0A0B4J271 114 aa9.78□□□□□ -0.84
CCDC187-201ENST00000563590 PF4V1P10720 104 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms