RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 PDZD2O15018 2839 aa-0.65□□□□□ -2.51
CASC4-210ENST00000559550 POLR2HP52434 150 aaKnown RBP-0.65□□□□□ -2.51
CASC4-210ENST00000559550 POLR2JP52435 117 aaKnown RBP-0.65□□□□□ -2.51
CASC4-210ENST00000559550 OR4S1Q8NGB4 309 aa-0.65□□□□□ -2.51
CASC4-210ENST00000559550 THEM6Q8WUY1 208 aa-0.65□□□□□ -2.51
CASC4-210ENST00000559550 TNS1Q9HBL0 1735 aaKnown RBP-0.65□□□□□ -2.51
CASC4-210ENST00000559550 ZNF292O60281 2723 aa-0.66□□□□□ -2.51
CASC4-210ENST00000559550 UBR4Q5T4S7 5183 aa-0.66□□□□□ -2.51
CASC4-210ENST00000559550 WDR97A6NE52 1622 aa-0.66□□□□□ -2.51
CASC4-210ENST00000559550 GVQW2A0A096LPI5 108 aaPredicted RBP-0.66□□□□□ -2.52
CASC4-210ENST00000559550 TEX49A0A1B0GTD5 131 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 C10orf142B7Z368 130 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 OR2H2O95918 312 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 NMBP08949 121 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 IFITM1P13164 125 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 RPL7P18124 248 aaKnown RBP-0.66□□□□□ -2.52
CASC4-210ENST00000559550 G0S2P27469 103 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 SDC4P31431 198 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 LSM3P62310 102 aaKnown RBP-0.66□□□□□ -2.52
CASC4-210ENST00000559550 TRIQKQ629K1 86 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 CDC26Q8NHZ8 85 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 BPESC1Q9GZL8 116 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 COA4Q9NYJ1 87 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 LAMC3Q9Y6N6 1575 aa-0.66□□□□□ -2.52
CASC4-210ENST00000559550 MAP1AP78559 2803 aaPredicted RBP-0.67□□□□□ -2.52
CASC4-210ENST00000559550 KIDINS220Q9ULH0 1771 aa-0.67□□□□□ -2.52
CASC4-210ENST00000559550 CDK13Q14004 1512 aaKnown RBP-0.67□□□□□ -2.52
CASC4-210ENST00000559550 AKAP6Q13023 2319 aa-0.67□□□□□ -2.52
CASC4-210ENST00000559550 TRAV17A0A0B4J275 112 aa-0.67□□□□□ -2.52
CASC4-210ENST00000559550 SLC25A5P05141 298 aaKnown RBP-0.67□□□□□ -2.52
CASC4-210ENST00000559550 RPL22P35268 128 aaKnown RBP-0.67□□□□□ -2.52
CASC4-210ENST00000559550 MT4P47944 62 aa-0.67□□□□□ -2.52
CASC4-210ENST00000559550 BET1LQ9NYM9 111 aa-0.67□□□□□ -2.52
CASC4-210ENST00000559550 LPAP08519 4548 aa-0.67□□□□□ -2.52
CASC4-210ENST00000559550 A2MP01023 1474 aa-0.67□□□□□ -2.52
CASC4-210ENST00000559550 PTPRQQ9UMZ3 2332 aa-0.67□□□□□ -2.52
CASC4-210ENST00000559550 TRAV12-2A0A075B6T6 113 aa-0.68□□□□□ -2.52
CASC4-210ENST00000559550 CXorf51AA0A1B0GTR3 108 aa-0.68□□□□□ -2.52
CASC4-210ENST00000559550 FAM107AO95990 144 aa-0.68□□□□□ -2.52
CASC4-210ENST00000559550 PCBD1P61457 104 aa-0.68□□□□□ -2.52
CASC4-210ENST00000559550 SPTBN2O15020 2390 aa-0.68□□□□□ -2.52
CASC4-210ENST00000559550 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.68□□□□□ -2.52
CASC4-210ENST00000559550 SETD2Q9BYW2 2564 aaPredicted RBP-0.68□□□□□ -2.52
CASC4-210ENST00000559550 EPPK1P58107 5090 aaKnown RBP-0.68□□□□□ -2.52
CASC4-210ENST00000559550 FER1L6Q2WGJ9 1857 aa-0.69□□□□□ -2.52
CASC4-210ENST00000559550 HIVEP1P15822 2718 aa-0.69□□□□□ -2.52
CASC4-210ENST00000559550 UQCRQO14949 82 aa-0.69□□□□□ -2.52
CASC4-210ENST00000559550 IFNA21P01568 189 aa-0.69□□□□□ -2.52
CASC4-210ENST00000559550 DCHS2Q6V1P9 2916 aa-0.69□□□□□ -2.52
CASC4-210ENST00000559550 MYH1P12882 1939 aa-0.7□□□□□ -2.52
CASC4-210ENST00000559550 CSMD3Q7Z407 3707 aa-0.7□□□□□ -2.52
CASC4-210ENST00000559550 E7EQ34 232 aa-0.7□□□□□ -2.52
CASC4-210ENST00000559550 ZNF670-ZNF695F2Z2N8 137 aa-0.7□□□□□ -2.52
CASC4-210ENST00000559550 GNG10P50151 68 aa-0.7□□□□□ -2.52
CASC4-210ENST00000559550 PPP1R1CQ8WVI7 109 aa-0.7□□□□□ -2.52
CASC4-210ENST00000559550 PCBD2Q9H0N5 130 aa-0.7□□□□□ -2.52
CASC4-210ENST00000559550 NDUFAF1Q9Y375 327 aa-0.7□□□□□ -2.52
CASC4-210ENST00000559550 SETXQ7Z333 2677 aaKnown RBP-0.7□□□□□ -2.52
CASC4-210ENST00000559550 ROCK1Q13464 1354 aa-0.7□□□□□ -2.52
CASC4-210ENST00000559550 VIRMAQ69YN4 1812 aaKnown RBP-0.71□□□□□ -2.52
CASC4-210ENST00000559550 A0A087WTM6 91 aa-0.71□□□□□ -2.52
CASC4-210ENST00000559550 PFDN1O60925 122 aa-0.71□□□□□ -2.52
CASC4-210ENST00000559550 APOC1P02654 83 aa-0.71□□□□□ -2.52
CASC4-210ENST00000559550 TCRAP04437 139 aa-0.71□□□□□ -2.52
CASC4-210ENST00000559550 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.71□□□□□ -2.52
CASC4-210ENST00000559550 ATPIF1Q9UII2 106 aa-0.71□□□□□ -2.52
CASC4-210ENST00000559550 SSC5DA1L4H1 1573 aa-0.71□□□□□ -2.52
CASC4-210ENST00000559550 RNF213Q63HN8 5207 aa-0.71□□□□□ -2.52
CASC4-210ENST00000559550 NBEAL1Q6ZS30 2694 aa-0.72□□□□□ -2.52
CASC4-210ENST00000559550 PNMA8CA0A1B0GUJ8 204 aa-0.72□□□□□ -2.52
CASC4-210ENST00000559550 PGRMC1O00264 195 aaKnown RBP-0.72□□□□□ -2.52
CASC4-210ENST00000559550 PPDPFLQ8WWR9 84 aa-0.72□□□□□ -2.52
CASC4-210ENST00000559550 METTL1Q9UBP6 276 aaKnown RBP-0.72□□□□□ -2.52
CASC4-210ENST00000559550 PKD1L1Q8TDX9 2849 aa-0.72□□□□□ -2.53
CASC4-210ENST00000559550 BIRC6Q9NR09 4857 aa-0.72□□□□□ -2.53
CASC4-210ENST00000559550 CHD6Q8TD26 2715 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 RYR2Q92736 4967 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 AKR1D1P51857 326 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 HSD17B12Q53GQ0 312 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 OR2T2Q6IF00 324 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 SLC25A26Q70HW3 274 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 SMIM11BQ8TCY0 68 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 MED23Q9ULK4 1368 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 STAB2Q8WWQ8 2551 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 HECTD1Q9ULT8 2610 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 ARHGAP31Q2M1Z3 1444 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 HECTD4Q9Y4D8 3996 aa-0.73□□□□□ -2.53
CASC4-210ENST00000559550 EP300Q09472 2414 aaPredicted RBP-0.74□□□□□ -2.53
CASC4-210ENST00000559550 TCRBV3S1A0A5B6 114 aa-0.74□□□□□ -2.53
CASC4-210ENST00000559550 E5RI56 91 aa-0.74□□□□□ -2.53
CASC4-210ENST00000559550 PPP1R2P3Q6NXS1 205 aa-0.74□□□□□ -2.53
CASC4-210ENST00000559550 CCDC115Q96NT0 180 aa-0.74□□□□□ -2.53
CASC4-210ENST00000559550 HELZP42694 1942 aaKnown RBP-0.74□□□□□ -2.53
CASC4-210ENST00000559550 USP9YO00507 2555 aaPredicted RBP-0.74□□□□□ -2.53
CASC4-210ENST00000559550 ACANP16112 2415 aa-0.75□□□□□ -2.53
CASC4-210ENST00000559550 RBAKDNA6NC62 111 aa-0.75□□□□□ -2.53
CASC4-210ENST00000559550 APODP05090 189 aa-0.75□□□□□ -2.53
CASC4-210ENST00000559550 PLGLB1Q02325 96 aa-0.75□□□□□ -2.53
CASC4-210ENST00000559550 VPS25Q9BRG1 176 aa-0.75□□□□□ -2.53
CASC4-210ENST00000559550 TAS2R8Q9NYW2 309 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms