RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 HTN1P15515 57 aa10.76□□□□□ -0.69
VPS18-202ENST00000558474 RIGQ13278 110 aa10.76□□□□□ -0.69
VPS18-202ENST00000558474 DEFB135Q30KP9 77 aa10.76□□□□□ -0.69
VPS18-202ENST00000558474 C11orf72Q8NBR9 251 aa10.76□□□□□ -0.69
VPS18-202ENST00000558474 PGLYRP4Q96LB8 373 aa10.76□□□□□ -0.69
VPS18-202ENST00000558474 URGCP-MRPS24S4R325 110 aa10.76□□□□□ -0.69
VPS18-202ENST00000558474 MDFICQ9P1T7 246 aa10.75□□□□□ -0.69
VPS18-202ENST00000558474 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
VPS18-202ENST00000558474 X6R8D5 127 aa10.75□□□□□ -0.69
VPS18-202ENST00000558474 NXPH4O95158 308 aa10.74□□□□□ -0.69
VPS18-202ENST00000558474 DAZ2Q13117 558 aaKnown RBP10.74□□□□□ -0.69
VPS18-202ENST00000558474 DEFB121Q5J5C9 76 aa10.74□□□□□ -0.69
VPS18-202ENST00000558474 ZFP82Q8N141 532 aa10.74□□□□□ -0.69
VPS18-202ENST00000558474 SYT8Q8NBV8 401 aa10.74□□□□□ -0.69
VPS18-202ENST00000558474 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
VPS18-202ENST00000558474 IL17DQ8TAD2 202 aa10.74□□□□□ -0.69
VPS18-202ENST00000558474 TPPP3Q9BW30 176 aa10.74□□□□□ -0.69
VPS18-202ENST00000558474 A0A1B0GXF2 115 aa10.73□□□□□ -0.69
VPS18-202ENST00000558474 SNURFLB1AK76 121 aa10.73□□□□□ -0.69
VPS18-202ENST00000558474 M0R2P5 195 aa10.73□□□□□ -0.69
VPS18-202ENST00000558474 PRB2P02812 416 aaPredicted RBP10.73□□□□□ -0.69
VPS18-202ENST00000558474 AZU1P20160 251 aa10.73□□□□□ -0.69
VPS18-202ENST00000558474 LGALS9BQ3B8N2 356 aa10.73□□□□□ -0.69
VPS18-202ENST00000558474 SPANXN1Q5VSR9 72 aa10.73□□□□□ -0.69
VPS18-202ENST00000558474 OVOL2Q9BRP0 275 aa10.73□□□□□ -0.69
VPS18-202ENST00000558474 MGAM2Q2M2H8 2515 aa10.73□□□□□ -0.69
VPS18-202ENST00000558474 COLCA2A8K830 154 aa10.72□□□□□ -0.69
VPS18-202ENST00000558474 NTF3P20783 257 aa10.72□□□□□ -0.69
VPS18-202ENST00000558474 HBBP68871 147 aa10.72□□□□□ -0.69
VPS18-202ENST00000558474 GATD1Q8NB37 220 aa10.72□□□□□ -0.69
VPS18-202ENST00000558474 MRAPQ8TCY5 172 aa10.72□□□□□ -0.69
VPS18-202ENST00000558474 FAM210BQ96KR6 192 aa10.72□□□□□ -0.69
VPS18-202ENST00000558474 SPATA25Q9BR10 227 aa10.72□□□□□ -0.69
VPS18-202ENST00000558474 GSN-AS1Q9NRJ2 163 aa10.72□□□□□ -0.69
VPS18-202ENST00000558474 TIMM8BQ9Y5J9 83 aaPredicted RBP10.72□□□□□ -0.69
VPS18-202ENST00000558474 TGIF2-C20orf24A0A0A6YYL0 155 aa10.71□□□□□ -0.69
VPS18-202ENST00000558474 TRGC1P0CF51 173 aa10.71□□□□□ -0.69
VPS18-202ENST00000558474 NBEAL1Q6ZS30 2694 aa10.71□□□□□ -0.69
VPS18-202ENST00000558474 OR10AG1Q8NH19 301 aa10.71□□□□□ -0.69
VPS18-202ENST00000558474 RASL10AQ92737 203 aa10.71□□□□□ -0.69
VPS18-202ENST00000558474 TM2D3Q9BRN9 247 aa10.71□□□□□ -0.69
VPS18-202ENST00000558474 PLAC8L1A1L4L8 177 aa10.7□□□□□ -0.7
VPS18-202ENST00000558474 SPINK4O60575 86 aa10.7□□□□□ -0.7
VPS18-202ENST00000558474 MT-ND6P03923 174 aa10.7□□□□□ -0.7
VPS18-202ENST00000558474 PRM2P04554 102 aa10.7□□□□□ -0.7
VPS18-202ENST00000558474 TWIST1Q15672 202 aa10.7□□□□□ -0.7
VPS18-202ENST00000558474 MRPL54Q6P161 138 aaKnown RBP10.7□□□□□ -0.7
VPS18-202ENST00000558474 SMIM15Q7Z3B0 74 aa10.7□□□□□ -0.7
VPS18-202ENST00000558474 SBSPONQ8IVN8 264 aa10.7□□□□□ -0.7
VPS18-202ENST00000558474 GNB1LQ9BYB4 327 aa10.7□□□□□ -0.7
VPS18-202ENST00000558474 LYRM9A8MSI8 78 aa10.69□□□□□ -0.7
VPS18-202ENST00000558474 M0R381 172 aa10.69□□□□□ -0.7
VPS18-202ENST00000558474 ZNF876PQ49A33 203 aa10.69□□□□□ -0.7
VPS18-202ENST00000558474 Q8NAQ8 132 aa10.69□□□□□ -0.7
VPS18-202ENST00000558474 B9D2Q9BPU9 175 aa10.69□□□□□ -0.7
VPS18-202ENST00000558474 TMEM191AQ9H0A3 160 aa10.69□□□□□ -0.7
VPS18-202ENST00000558474 MUC4Q99102 2169 aa10.68□□□□□ -0.7
VPS18-202ENST00000558474 DNHD1Q96M86 4753 aa10.68□□□□□ -0.7
VPS18-202ENST00000558474 NOTCH1P46531 2555 aa10.68□□□□□ -0.7
VPS18-202ENST00000558474 TEX48A0A1B0GUV7 120 aa10.68□□□□□ -0.7
VPS18-202ENST00000558474 A8MWV9 139 aa10.68□□□□□ -0.7
VPS18-202ENST00000558474 CIDEAO60543 219 aa10.68□□□□□ -0.7
VPS18-202ENST00000558474 HLA-DQA1P01909 254 aa10.68□□□□□ -0.7
VPS18-202ENST00000558474 DMRTA1Q5VZB9 504 aa10.68□□□□□ -0.7
VPS18-202ENST00000558474 AP1S3Q96PC3 154 aa10.68□□□□□ -0.7
VPS18-202ENST00000558474 ZMAT4Q9H898 229 aa10.68□□□□□ -0.7
VPS18-202ENST00000558474 IGHV4-28A0A0C4DH34 117 aa10.67□□□□□ -0.7
VPS18-202ENST00000558474 RAB5AP20339 215 aa10.67□□□□□ -0.7
VPS18-202ENST00000558474 FRZBQ92765 325 aa10.67□□□□□ -0.7
VPS18-202ENST00000558474 C18orf15Q96N68 181 aa10.67□□□□□ -0.7
VPS18-202ENST00000558474 C11orf68Q9H3H3 251 aaKnown RBP10.67□□□□□ -0.7
VPS18-202ENST00000558474 CAMPP49913 170 aa10.66□□□□□ -0.7
VPS18-202ENST00000558474 TMEM136Q6ZRR5 245 aa10.66□□□□□ -0.7
VPS18-202ENST00000558474 LINC00612Q8N6U2 182 aa10.66□□□□□ -0.7
VPS18-202ENST00000558474 DPH3P1Q9H4G8 78 aa10.66□□□□□ -0.7
VPS18-202ENST00000558474 NOP10Q9NPE3 64 aaKnown RBP10.66□□□□□ -0.7
VPS18-202ENST00000558474 MSRB1Q9NZV6 116 aa10.66□□□□□ -0.7
VPS18-202ENST00000558474 MUC21A0A0G2JKD1 596 aa10.65□□□□□ -0.7
VPS18-202ENST00000558474 MUC21A0A140T8X8 626 aa10.65□□□□□ -0.7
VPS18-202ENST00000558474 NHLRC4P0CG21 123 aaPredicted RBP10.65□□□□□ -0.7
VPS18-202ENST00000558474 SMIM17P0DL12 118 aa10.65□□□□□ -0.7
VPS18-202ENST00000558474 TRGV1A0A0A0MS02 117 aa10.64□□□□□ -0.71
VPS18-202ENST00000558474 RHODO00212 210 aa10.64□□□□□ -0.71
VPS18-202ENST00000558474 RS1O15537 224 aa10.64□□□□□ -0.71
VPS18-202ENST00000558474 SPART-AS1P0CW21 52 aa10.64□□□□□ -0.71
VPS18-202ENST00000558474 RAB4BP61018 213 aa10.64□□□□□ -0.71
VPS18-202ENST00000558474 DEFA6Q01524 100 aa10.64□□□□□ -0.71
VPS18-202ENST00000558474 FAM104BQ5XKR9 115 aa10.64□□□□□ -0.71
VPS18-202ENST00000558474 ZFP2Q6ZN57 461 aa10.64□□□□□ -0.71
VPS18-202ENST00000558474 POM121L12Q8N7R1 296 aa10.64□□□□□ -0.71
VPS18-202ENST00000558474 KIF25-AS1Q9Y6Z4 181 aa10.64□□□□□ -0.71
VPS18-202ENST00000558474 TRAV4A0A0B4J268 109 aa10.63□□□□□ -0.71
VPS18-202ENST00000558474 RPS10P46783 165 aaKnown RBP10.63□□□□□ -0.71
VPS18-202ENST00000558474 SSTP61278 116 aa10.63□□□□□ -0.71
VPS18-202ENST00000558474 RETNQ9HD89 108 aa10.63□□□□□ -0.71
VPS18-202ENST00000558474 MRPL16Q9NX20 251 aaKnown RBP10.63□□□□□ -0.71
VPS18-202ENST00000558474 DKK2Q9UBU2 259 aa10.63□□□□□ -0.71
VPS18-202ENST00000558474 TRAPPC1Q9Y5R8 145 aa10.63□□□□□ -0.71
VPS18-202ENST00000558474 APCSP02743 223 aa10.62□□□□□ -0.71
VPS18-202ENST00000558474 CRYGDP07320 174 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms