RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 SVEP1Q4LDE5 3571 aa8.45□□□□□ -1.06
CCDC85C-207ENST00000557769 CCL21O00585 134 aa8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 GNRH2O43555 120 aa8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 ORMDL2Q53FV1 153 aa8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 RNASE13Q5GAN3 156 aaKnown RBP8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 PLEKHB2Q96CS7 222 aa8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 RPL13AP40429 203 aaKnown RBP8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 FOXI1Q12951 378 aa8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 FAM159AQ6UWV7 190 aa8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 WI2-2373I1.2A0A1W2PRP0 233 aa8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 PDE6HQ13956 83 aa8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 KHDC1LQ5JSQ8 128 aa8.44□□□□□ -1.06
CCDC85C-207ENST00000557769 B9A039 149 aa8.43□□□□□ -1.06
CCDC85C-207ENST00000557769 E9PLD3 99 aa8.43□□□□□ -1.06
CCDC85C-207ENST00000557769 RPL39P62891 51 aaKnown RBP8.43□□□□□ -1.06
CCDC85C-207ENST00000557769 CHD6Q8TD26 2715 aa8.43□□□□□ -1.06
CCDC85C-207ENST00000557769 DUSP14O95147 198 aaKnown RBP8.43□□□□□ -1.06
CCDC85C-207ENST00000557769 GRNP28799 593 aaKnown RBP8.43□□□□□ -1.06
CCDC85C-207ENST00000557769 ERG28Q9UKR5 140 aa8.43□□□□□ -1.06
CCDC85C-207ENST00000557769 LINC00311Q8N616 119 aa8.43□□□□□ -1.06
CCDC85C-207ENST00000557769 NTN5Q8WTR8 489 aaPredicted RBP8.43□□□□□ -1.06
CCDC85C-207ENST00000557769 VMO1Q7Z5L0 202 aa8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 TRPT1Q86TN4 253 aaKnown RBP8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 SPXQ9BT56 116 aa8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 UBR5O95071 2799 aaPredicted RBP8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 ZNF493Q6ZR52 646 aa8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 RNF185Q96GF1 192 aa8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 HHLA3Q9XRX5 114 aa8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 ATP6V0E1O15342 81 aa8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 FCN3O75636 299 aa8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 CTSGP08311 255 aa8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 PPDPFLQ8WWR9 84 aa8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 EEF1AKMT3Q96AZ1 226 aa8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 OPRPNQ99935 248 aaPredicted RBP8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 JPT2Q9H910 190 aa8.42□□□□□ -1.06
CCDC85C-207ENST00000557769 LGALS1P09382 135 aaKnown RBP8.41□□□□□ -1.06
CCDC85C-207ENST00000557769 DGAT2L7PQ6IED9 249 aa8.41□□□□□ -1.06
CCDC85C-207ENST00000557769 ZNF625Q96I27 306 aaPredicted RBP8.41□□□□□ -1.06
CCDC85C-207ENST00000557769 C1QTNF4Q9BXJ3 329 aa8.41□□□□□ -1.06
CCDC85C-207ENST00000557769 OR11H6Q8NGC7 330 aa8.41□□□□□ -1.06
CCDC85C-207ENST00000557769 KLRB1Q12918 225 aa8.41□□□□□ -1.06
CCDC85C-207ENST00000557769 SMIM20Q8N5G0 67 aa8.41□□□□□ -1.06
CCDC85C-207ENST00000557769 FANCD2OSQ96PS1 177 aa8.41□□□□□ -1.06
CCDC85C-207ENST00000557769 THBDP07204 575 aa8.4□□□□□ -1.06
CCDC85C-207ENST00000557769 BRD3OSQ6XYD6 125 aa8.4□□□□□ -1.06
CCDC85C-207ENST00000557769 NUP37Q8NFH4 326 aa8.4□□□□□ -1.06
CCDC85C-207ENST00000557769 SLC50A1Q9BRV3 221 aa8.4□□□□□ -1.06
CCDC85C-207ENST00000557769 TENM4Q6N022 2769 aa8.4□□□□□ -1.06
CCDC85C-207ENST00000557769 LRBAP50851 2863 aa8.4□□□□□ -1.06
CCDC85C-207ENST00000557769 IGLV1-47P01700 117 aa8.4□□□□□ -1.06
CCDC85C-207ENST00000557769 ANKRD29Q8N6D5 301 aa8.4□□□□□ -1.06
CCDC85C-207ENST00000557769 DPH3P1Q9H4G8 78 aa8.4□□□□□ -1.06
CCDC85C-207ENST00000557769 HIGD1BQ9P298 99 aa8.4□□□□□ -1.06
CCDC85C-207ENST00000557769 C11orf21Q9P2W6 132 aa8.4□□□□□ -1.06
CCDC85C-207ENST00000557769 POLQO75417 2590 aa8.4□□□□□ -1.07
CCDC85C-207ENST00000557769 TSPAN13O95857 204 aa8.4□□□□□ -1.07
CCDC85C-207ENST00000557769 GATA3P23771 443 aa8.4□□□□□ -1.07
CCDC85C-207ENST00000557769 ZNF48Q96MX3 618 aaPredicted RBP8.4□□□□□ -1.07
CCDC85C-207ENST00000557769 COL12A1Q99715 3063 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 TRAV21A0A0B4J279 112 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 IGKV3OR2-268A0A0C4DH90 116 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 RS1O15537 224 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 SLC25A20O43772 301 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 XGP55808 180 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 PSMG4Q5JS54 123 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 TRAV12-2A0A075B6T6 113 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 ASH1LQ9NR48 2969 aaKnown RBP8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 IGHV3OR16-12A0A075B7B8 117 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 Q6ZUT4 128 aa8.39□□□□□ -1.07
CCDC85C-207ENST00000557769 TRAV8-3A0A0A6YYJ7 113 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 LINC01548A6NM66 108 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 INS-IGF2F8WCM5 200 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 TCL1BO95988 128 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 ZNF688P0C7X2 276 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 PAX8Q06710 450 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 TM2D2Q9BX73 214 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 VCX2Q9H322 139 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 ABCA2Q9BZC7 2435 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 DCHS2Q6V1P9 2916 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 C11orf86A6NJI1 115 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 PRB1P04280 392 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 COX6CP09669 75 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 IGLC6P0CF74 106 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 C2orf82Q6UX34 121 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 PRO1854Q9UHT4 67 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 SMAD5-AS1Q9Y6J3 95 aa8.38□□□□□ -1.07
CCDC85C-207ENST00000557769 NOTCH2Q04721 2471 aa8.37□□□□□ -1.07
CCDC85C-207ENST00000557769 CENPEQ02224 2701 aa8.37□□□□□ -1.07
CCDC85C-207ENST00000557769 FN1P02751 2386 aaKnown RBP8.37□□□□□ -1.07
CCDC85C-207ENST00000557769 ZNF843Q8N446 348 aa8.37□□□□□ -1.07
CCDC85C-207ENST00000557769 MYO18BQ8IUG5 2567 aa8.37□□□□□ -1.07
CCDC85C-207ENST00000557769 ZFYVE26Q68DK2 2539 aa8.37□□□□□ -1.07
CCDC85C-207ENST00000557769 IGLV11-55A0A075B6I3 123 aa8.37□□□□□ -1.07
CCDC85C-207ENST00000557769 A4D1N5 150 aa8.37□□□□□ -1.07
CCDC85C-207ENST00000557769 ZNF876PQ49A33 203 aa8.37□□□□□ -1.07
CCDC85C-207ENST00000557769 RAI1Q7Z5J4 1906 aaPredicted RBP8.37□□□□□ -1.07
CCDC85C-207ENST00000557769 BAALCQ8WXS3 180 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms