RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 FXYD7P58549 80 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 RETNQ9HD89 108 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 RPL18AQ02543 176 aaKnown RBP7.07□□□□□ -1.28
SYNE3-205ENST00000557275 UBE2E1P51965 193 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 SERP1Q9Y6X1 66 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 DIRC1Q969H9 104 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 RNF185Q96GF1 192 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 NDUFA4L2Q9NRX3 87 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 K7ERJ3 54 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 ZNF672Q499Z4 452 aaPredicted RBP7.07□□□□□ -1.28
SYNE3-205ENST00000557275 FGFBP3Q8TAT2 258 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 DKK2Q9UBU2 259 aa7.07□□□□□ -1.28
SYNE3-205ENST00000557275 POLQO75417 2590 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 K7EM74 188 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 DEFB131AP59861 70 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 RFPL3SP0C7P2 107 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 TMEM61Q8N0U2 210 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 B9D2Q9BPU9 175 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 PAQR4Q8N4S7 273 aaPredicted RBP7.06□□□□□ -1.28
SYNE3-205ENST00000557275 A6NED7 52 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 CCL25O15444 150 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 IGHV1-18A0A0C4DH31 117 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 PIEZO2Q9H5I5 2752 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 SPINK13Q1W4C9 94 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 HIST2H2BCQ6DN03 193 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 CAMK2N2Q96S95 79 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 H0Y9J4 135 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 ZNF524Q96C55 264 aa7.06□□□□□ -1.28
SYNE3-205ENST00000557275 IGKV2D-24A0A075B6R9 120 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 OVOL3O00110 214 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 SAA4P35542 130 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 SP7Q8TDD2 431 aaPredicted RBP7.05□□□□□ -1.28
SYNE3-205ENST00000557275 SELENOKQ9Y6D0 94 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 TRAV4A0A0B4J268 109 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 XCL1P47992 114 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 TRAV12-2A0A075B6T6 113 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 GATA4P43694 442 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 PRB3Q04118 309 aaPredicted RBP7.05□□□□□ -1.28
SYNE3-205ENST00000557275 DEFB105AQ8NG35 78 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 C16orf74Q96GX8 76 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 CHD8Q9HCK8 2581 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 PIFOQ8TCI5 191 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 H3BRN7 92 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 A0A1B0GUS0 222 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 SHISA3A0PJX4 238 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 BPY2O14599 106 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 AMTNQ6UX39 209 aa7.05□□□□□ -1.28
SYNE3-205ENST00000557275 G3V4G9 280 aa7.04□□□□□ -1.28
SYNE3-205ENST00000557275 TMEM213A2RRL7 107 aa7.04□□□□□ -1.28
SYNE3-205ENST00000557275 FAM201AQ5SY85 155 aa7.04□□□□□ -1.28
SYNE3-205ENST00000557275 MST1P26927 711 aa7.04□□□□□ -1.28
SYNE3-205ENST00000557275 CCL18P55774 89 aa7.04□□□□□ -1.28
SYNE3-205ENST00000557275 IGLV3-19P01714 112 aa7.04□□□□□ -1.28
SYNE3-205ENST00000557275 ZNF747Q9BV97 191 aa7.04□□□□□ -1.28
SYNE3-205ENST00000557275 FGF23Q9GZV9 251 aaPredicted RBP7.04□□□□□ -1.28
SYNE3-205ENST00000557275 COA6Q5JTJ3 125 aaKnown RBP7.03□□□□□ -1.28
SYNE3-205ENST00000557275 WFDC12Q8WWY7 111 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 IGF2BP2-AS1Q96M15 143 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 XCL2Q9UBD3 114 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 IGLC1P0CG04 106 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 FANCD2OSQ96PS1 177 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 PTPRBP23467 1997 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 PRR30Q53SZ7 412 aaPredicted RBP7.03□□□□□ -1.28
SYNE3-205ENST00000557275 C9orf106Q8NAJ2 232 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 K7EQD1 137 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 FAM110AQ9BQ89 295 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 IGKV3D-7A0A0C4DH55 119 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 TEX36Q5VZQ5 186 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 C8orf49Q96NF6 230 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 FASNP49327 2511 aaKnown RBP7.03□□□□□ -1.28
SYNE3-205ENST00000557275 CD24P25063 80 aa7.03□□□□□ -1.28
SYNE3-205ENST00000557275 ELANEP08246 267 aa7.02□□□□□ -1.28
SYNE3-205ENST00000557275 Q6P435 159 aa7.02□□□□□ -1.29
SYNE3-205ENST00000557275 ZNF833PQ6ZTB9 187 aa7.02□□□□□ -1.29
SYNE3-205ENST00000557275 LINC00473A8K010 186 aa7.02□□□□□ -1.29
SYNE3-205ENST00000557275 C11orf86A6NJI1 115 aa7.02□□□□□ -1.29
SYNE3-205ENST00000557275 TIMM17AQ99595 171 aa7.02□□□□□ -1.29
SYNE3-205ENST00000557275 TRBV7-3A0A075B6L6 115 aa7.02□□□□□ -1.29
SYNE3-205ENST00000557275 SPACA3Q8IXA5 215 aa7.02□□□□□ -1.29
SYNE3-205ENST00000557275 PTPRSQ13332 1948 aa7.02□□□□□ -1.29
SYNE3-205ENST00000557275 LINC00311Q8N616 119 aa7.02□□□□□ -1.29
SYNE3-205ENST00000557275 IGHV4-28A0A0C4DH34 117 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 IGKV1-39P01597 117 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 IGKV1D-39P04432 117 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 PNRC2Q9NPJ4 139 aaKnown RBP7.01□□□□□ -1.29
SYNE3-205ENST00000557275 FAM19A3Q7Z5A8 133 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 IGHV1-69P01742 117 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 ZC2HC1AQ96GY0 325 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 SEM1Q6ZVN7 128 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 VOPP1Q96AW1 172 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 IGHV7-4-1A0A0J9YVY3 117 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 C10orf55Q5SWW7 151 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 TNS1Q9HBL0 1735 aaKnown RBP7.01□□□□□ -1.29
SYNE3-205ENST00000557275 C1QCP02747 245 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 WDR90Q96KV7 1748 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 IGKV1D-43A0A0B4J1Z2 117 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 GNLYP22749 145 aa7.01□□□□□ -1.29
SYNE3-205ENST00000557275 MSMBP08118 114 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 Q8TCH9 128 aa7□□□□□ -1.29
SYNE3-205ENST00000557275 ANKRD39Q53RE8 183 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms