RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 Q6ZQT7 251 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 ZFP82Q8N141 532 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 GTSF1Q8WW33 167 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 SPATA25Q9BR10 227 aa6.69□□□□□ -1.34
ACTN1-218ENST00000556343 SSBP4Q9BWG4 385 aaPredicted RBP6.69□□□□□ -1.34
ACTN1-218ENST00000556343 TRBV24-1A0A075B6N3 115 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 M0R2P5 195 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 TRGC1P0CF51 173 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 SMIM17P0DL12 118 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 CTRLP40313 264 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 TWIST1Q15672 202 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 PIK3CD-AS1Q5SR53 167 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 CBLN2Q8IUK8 224 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 PTH2Q96A98 100 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 C9orf85Q96MD7 179 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 NDUFAF3Q9BU61 184 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 DNHD1Q96M86 4753 aa6.68□□□□□ -1.34
ACTN1-218ENST00000556343 IGHV4-4A0A075B6R2 117 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 TEX48A0A1B0GUV7 120 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 SPINK4O60575 86 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 SCO1O75880 301 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 RNASE3P12724 160 aaKnown RBP6.67□□□□□ -1.34
ACTN1-218ENST00000556343 NTF3P20783 257 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 HBBP68871 147 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 DAZ2Q13117 558 aaKnown RBP6.67□□□□□ -1.34
ACTN1-218ENST00000556343 ELOBQ15370 118 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 LGALS9BQ3B8N2 356 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 RNASE8Q8TDE3 154 aaKnown RBP6.67□□□□□ -1.34
ACTN1-218ENST00000556343 FAM210BQ96KR6 192 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 SCRT2Q9NQ03 307 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 GSN-AS1Q9NRJ2 163 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 MDFICQ9P1T7 246 aa6.67□□□□□ -1.34
ACTN1-218ENST00000556343 NOTCH1P46531 2555 aa6.66□□□□□ -1.34
ACTN1-218ENST00000556343 M0R381 172 aa6.66□□□□□ -1.34
ACTN1-218ENST00000556343 MT-ND6P03923 174 aa6.66□□□□□ -1.34
ACTN1-218ENST00000556343 AZU1P20160 251 aa6.66□□□□□ -1.34
ACTN1-218ENST00000556343 CAMPP49913 170 aa6.66□□□□□ -1.34
ACTN1-218ENST00000556343 RAB4BP61018 213 aa6.66□□□□□ -1.34
ACTN1-218ENST00000556343 MRPL54Q6P161 138 aaKnown RBP6.66□□□□□ -1.34
ACTN1-218ENST00000556343 OVOL2Q9BRP0 275 aa6.66□□□□□ -1.34
ACTN1-218ENST00000556343 CNFNQ9BYD5 112 aa6.66□□□□□ -1.34
ACTN1-218ENST00000556343 X6R8D5 127 aa6.66□□□□□ -1.34
ACTN1-218ENST00000556343 TRGV1A0A0A0MS02 117 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 TGIF2-C20orf24A0A0A6YYL0 155 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 LYRM9A8MSI8 78 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 A8MWV9 139 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 CIDEAO60543 219 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 NHLRC4P0CG21 123 aaPredicted RBP6.65□□□□□ -1.34
ACTN1-218ENST00000556343 EMP1P54849 157 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 SSTP61278 116 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 ZNF876PQ49A33 203 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 SBSPONQ8IVN8 264 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 C11orf72Q8NBR9 251 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 OR10AG1Q8NH19 301 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 RASL10AQ92737 203 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 AP1S3Q96PC3 154 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 GNB1LQ9BYB4 327 aa6.65□□□□□ -1.34
ACTN1-218ENST00000556343 NOP10Q9NPE3 64 aaKnown RBP6.65□□□□□ -1.34
ACTN1-218ENST00000556343 NBEAL1Q6ZS30 2694 aa6.65□□□□□ -1.35
ACTN1-218ENST00000556343 MUC21A0A0G2JKD1 596 aa6.64□□□□□ -1.35
ACTN1-218ENST00000556343 MUC21A0A140T8X8 626 aa6.64□□□□□ -1.35
ACTN1-218ENST00000556343 HLA-DQA1P01909 254 aa6.64□□□□□ -1.35
ACTN1-218ENST00000556343 PRM2P04554 102 aa6.64□□□□□ -1.35
ACTN1-218ENST00000556343 SPART-AS1P0CW21 52 aa6.64□□□□□ -1.35
ACTN1-218ENST00000556343 RPS10P46783 165 aaKnown RBP6.64□□□□□ -1.35
ACTN1-218ENST00000556343 DEFA6Q01524 100 aa6.64□□□□□ -1.35
ACTN1-218ENST00000556343 DMRTA1Q5VZB9 504 aa6.64□□□□□ -1.35
ACTN1-218ENST00000556343 ZNF575Q86XF7 245 aa6.64□□□□□ -1.35
ACTN1-218ENST00000556343 B9D2Q9BPU9 175 aa6.64□□□□□ -1.35
ACTN1-218ENST00000556343 TM2D3Q9BRN9 247 aa6.64□□□□□ -1.35
ACTN1-218ENST00000556343 TMEM191AQ9H0A3 160 aa6.64□□□□□ -1.35
ACTN1-218ENST00000556343 TRGV2A0A075B6R0 118 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 IGHV4-28A0A0C4DH34 117 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 A0A1B0GXF2 115 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 COLCA2A8K830 154 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 RHODO00212 210 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 NXPH4O95158 308 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 RAB5AP20339 215 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 OR4C5Q8NGB2 326 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 FRZBQ92765 325 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 YPEL4Q96NS1 127 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 DPH3P1Q9H4G8 78 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 TRAPPC1Q9Y5R8 145 aa6.63□□□□□ -1.35
ACTN1-218ENST00000556343 APCSP02743 223 aa6.62□□□□□ -1.35
ACTN1-218ENST00000556343 FABP9Q0Z7S8 132 aa6.62□□□□□ -1.35
ACTN1-218ENST00000556343 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.62□□□□□ -1.35
ACTN1-218ENST00000556343 Q8NAQ8 132 aa6.62□□□□□ -1.35
ACTN1-218ENST00000556343 IL17DQ8TAD2 202 aa6.62□□□□□ -1.35
ACTN1-218ENST00000556343 C11orf68Q9H3H3 251 aaKnown RBP6.62□□□□□ -1.35
ACTN1-218ENST00000556343 TRAV4A0A0B4J268 109 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 GAGE12BA1L429 117 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 F5H697 171 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 RS1O15537 224 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 GAGE7O76087 117 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 PPP1R17O96001 155 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 MGPP08493 103 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 GAGE12FP0CL80 117 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 GAGE12GP0CL81 117 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 GAGE12IP0CL82 117 aa6.61□□□□□ -1.35
ACTN1-218ENST00000556343 DAD1P61803 113 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms