RNA–Protein interactions for RNA: ENST00000545717.1

DDX11-230, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 3

Gene DDX11, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-230ENST00000545717 SMIM15Q7Z3B0 74 aa10.59□□□□□ -0.71
DDX11-230ENST00000545717 ZFP82Q8N141 532 aa10.59□□□□□ -0.71
DDX11-230ENST00000545717 OR11H2Q8NH07 326 aa10.59□□□□□ -0.71
DDX11-230ENST00000545717 TP53TG3Q9ULZ0 132 aa10.59□□□□□ -0.71
DDX11-230ENST00000545717 MGAM2Q2M2H8 2515 aa10.59□□□□□ -0.71
DDX11-230ENST00000545717 MIFP14174 115 aa10.58□□□□□ -0.72
DDX11-230ENST00000545717 ELOBQ15370 118 aa10.58□□□□□ -0.72
DDX11-230ENST00000545717 C9orf85Q96MD7 179 aa10.58□□□□□ -0.72
DDX11-230ENST00000545717 SSBP4Q9BWG4 385 aaPredicted RBP10.58□□□□□ -0.72
DDX11-230ENST00000545717 TRBV24-1A0A075B6N3 115 aa10.57□□□□□ -0.72
DDX11-230ENST00000545717 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
DDX11-230ENST00000545717 HBBP68871 147 aa10.57□□□□□ -0.72
DDX11-230ENST00000545717 TWIST1Q15672 202 aa10.57□□□□□ -0.72
DDX11-230ENST00000545717 RASL11AQ6T310 242 aa10.57□□□□□ -0.72
DDX11-230ENST00000545717 RNASE8Q8TDE3 154 aaKnown RBP10.57□□□□□ -0.72
DDX11-230ENST00000545717 SPATA25Q9BR10 227 aa10.57□□□□□ -0.72
DDX11-230ENST00000545717 MDFICQ9P1T7 246 aa10.57□□□□□ -0.72
DDX11-230ENST00000545717 M0R2P5 195 aa10.56□□□□□ -0.72
DDX11-230ENST00000545717 SPINK4O60575 86 aa10.56□□□□□ -0.72
DDX11-230ENST00000545717 TRGC1P0CF51 173 aa10.56□□□□□ -0.72
DDX11-230ENST00000545717 MRPL54Q6P161 138 aaKnown RBP10.56□□□□□ -0.72
DDX11-230ENST00000545717 FAM210BQ96KR6 192 aa10.56□□□□□ -0.72
DDX11-230ENST00000545717 CNFNQ9BYD5 112 aa10.56□□□□□ -0.72
DDX11-230ENST00000545717 SCRT2Q9NQ03 307 aa10.56□□□□□ -0.72
DDX11-230ENST00000545717 GSN-AS1Q9NRJ2 163 aa10.56□□□□□ -0.72
DDX11-230ENST00000545717 TGIF2-C20orf24A0A0A6YYL0 155 aa10.55□□□□□ -0.72
DDX11-230ENST00000545717 M0R381 172 aa10.55□□□□□ -0.72
DDX11-230ENST00000545717 RAB4BP61018 213 aa10.55□□□□□ -0.72
DDX11-230ENST00000545717 PIK3CD-AS1Q5SR53 167 aa10.55□□□□□ -0.72
DDX11-230ENST00000545717 C11orf72Q8NBR9 251 aa10.55□□□□□ -0.72
DDX11-230ENST00000545717 OR10AG1Q8NH19 301 aa10.55□□□□□ -0.72
DDX11-230ENST00000545717 NDUFAF3Q9BU61 184 aa10.55□□□□□ -0.72
DDX11-230ENST00000545717 ZMAT4Q9H898 229 aa10.55□□□□□ -0.72
DDX11-230ENST00000545717 DNAH3Q8TD57 4116 aa10.55□□□□□ -0.72
DDX11-230ENST00000545717 NOTCH1P46531 2555 aa10.54□□□□□ -0.72
DDX11-230ENST00000545717 IGHV4-4A0A075B6R2 117 aa10.54□□□□□ -0.72
DDX11-230ENST00000545717 SMIM17P0DL12 118 aa10.54□□□□□ -0.72
DDX11-230ENST00000545717 AZU1P20160 251 aa10.54□□□□□ -0.72
DDX11-230ENST00000545717 NTF3P20783 257 aa10.54□□□□□ -0.72
DDX11-230ENST00000545717 SSTP61278 116 aa10.54□□□□□ -0.72
DDX11-230ENST00000545717 PTH2Q96A98 100 aa10.54□□□□□ -0.72
DDX11-230ENST00000545717 AP1S3Q96PC3 154 aa10.54□□□□□ -0.72
DDX11-230ENST00000545717 X6R8D5 127 aa10.54□□□□□ -0.72
DDX11-230ENST00000545717 MUC21A0A0G2JKD1 596 aa10.53□□□□□ -0.72
DDX11-230ENST00000545717 MUC21A0A140T8X8 626 aa10.53□□□□□ -0.72
DDX11-230ENST00000545717 TEX48A0A1B0GUV7 120 aa10.53□□□□□ -0.72
DDX11-230ENST00000545717 MT-ND6P03923 174 aa10.53□□□□□ -0.72
DDX11-230ENST00000545717 CAMPP49913 170 aa10.53□□□□□ -0.72
DDX11-230ENST00000545717 DAZ2Q13117 558 aaKnown RBP10.53□□□□□ -0.72
DDX11-230ENST00000545717 LGALS9BQ3B8N2 356 aa10.53□□□□□ -0.72
DDX11-230ENST00000545717 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
DDX11-230ENST00000545717 ZNF575Q86XF7 245 aa10.53□□□□□ -0.72
DDX11-230ENST00000545717 OVOL2Q9BRP0 275 aa10.53□□□□□ -0.72
DDX11-230ENST00000545717 TRGV1A0A0A0MS02 117 aa10.52□□□□□ -0.73
DDX11-230ENST00000545717 NXPH4O95158 308 aa10.52□□□□□ -0.73
DDX11-230ENST00000545717 HLA-DQA1P01909 254 aa10.52□□□□□ -0.73
DDX11-230ENST00000545717 PRM2P04554 102 aa10.52□□□□□ -0.73
DDX11-230ENST00000545717 EMP1P54849 157 aa10.52□□□□□ -0.73
DDX11-230ENST00000545717 SBSPONQ8IVN8 264 aa10.52□□□□□ -0.73
DDX11-230ENST00000545717 IL17DQ8TAD2 202 aa10.52□□□□□ -0.73
DDX11-230ENST00000545717 YPEL4Q96NS1 127 aa10.52□□□□□ -0.73
DDX11-230ENST00000545717 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.73
DDX11-230ENST00000545717 IGHV4-28A0A0C4DH34 117 aa10.51□□□□□ -0.73
DDX11-230ENST00000545717 A0A1B0GXF2 115 aa10.51□□□□□ -0.73
DDX11-230ENST00000545717 LYRM9A8MSI8 78 aa10.51□□□□□ -0.73
DDX11-230ENST00000545717 A8MWV9 139 aa10.51□□□□□ -0.73
DDX11-230ENST00000545717 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.51□□□□□ -0.73
DDX11-230ENST00000545717 B9D2Q9BPU9 175 aa10.51□□□□□ -0.73
DDX11-230ENST00000545717 GNB1LQ9BYB4 327 aa10.51□□□□□ -0.73
DDX11-230ENST00000545717 COLCA2A8K830 154 aa10.5□□□□□ -0.73
DDX11-230ENST00000545717 RAB5AP20339 215 aa10.5□□□□□ -0.73
DDX11-230ENST00000545717 RPS10P46783 165 aaKnown RBP10.5□□□□□ -0.73
DDX11-230ENST00000545717 DEFA6Q01524 100 aa10.5□□□□□ -0.73
DDX11-230ENST00000545717 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
DDX11-230ENST00000545717 TM2D3Q9BRN9 247 aa10.5□□□□□ -0.73
DDX11-230ENST00000545717 TMEM191AQ9H0A3 160 aa10.5□□□□□ -0.73
DDX11-230ENST00000545717 Q8NAQ8 132 aa10.49□□□□□ -0.73
DDX11-230ENST00000545717 RASL10AQ92737 203 aa10.49□□□□□ -0.73
DDX11-230ENST00000545717 FRZBQ92765 325 aa10.49□□□□□ -0.73
DDX11-230ENST00000545717 C11orf68Q9H3H3 251 aaKnown RBP10.49□□□□□ -0.73
DDX11-230ENST00000545717 DPH3P1Q9H4G8 78 aa10.49□□□□□ -0.73
DDX11-230ENST00000545717 RETNQ9HD89 108 aa10.49□□□□□ -0.73
DDX11-230ENST00000545717 MRPL16Q9NX20 251 aaKnown RBP10.49□□□□□ -0.73
DDX11-230ENST00000545717 TRAPPC1Q9Y5R8 145 aa10.49□□□□□ -0.73
DDX11-230ENST00000545717 TRGV2A0A075B6R0 118 aa10.48□□□□□ -0.73
DDX11-230ENST00000545717 PLAC8L1A1L4L8 177 aa10.48□□□□□ -0.73
DDX11-230ENST00000545717 RHODO00212 210 aa10.48□□□□□ -0.73
DDX11-230ENST00000545717 CIDEAO60543 219 aa10.48□□□□□ -0.73
DDX11-230ENST00000545717 SPART-AS1P0CW21 52 aa10.48□□□□□ -0.73
DDX11-230ENST00000545717 GATD1Q8NB37 220 aa10.48□□□□□ -0.73
DDX11-230ENST00000545717 APCSP02743 223 aa10.47□□□□□ -0.73
DDX11-230ENST00000545717 NHLRC4P0CG21 123 aaPredicted RBP10.47□□□□□ -0.73
DDX11-230ENST00000545717 TMEM136Q6ZRR5 245 aa10.47□□□□□ -0.73
DDX11-230ENST00000545717 MSRB1Q9NZV6 116 aa10.47□□□□□ -0.73
DDX11-230ENST00000545717 MUC4Q99102 2169 aa10.47□□□□□ -0.73
DDX11-230ENST00000545717 TRAV4A0A0B4J268 109 aa10.46□□□□□ -0.73
DDX11-230ENST00000545717 GAGE12BA1L429 117 aa10.46□□□□□ -0.73
DDX11-230ENST00000545717 GAGE7O76087 117 aa10.46□□□□□ -0.73
DDX11-230ENST00000545717 MGPP08493 103 aa10.46□□□□□ -0.73
DDX11-230ENST00000545717 GAGE12FP0CL80 117 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms