RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 LINC01587Q99440 93 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 TMEM208Q9BTX3 173 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 SSBP4Q9BWG4 385 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 CNFNQ9BYD5 112 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 A0A1B0GW15 77 aa8.92□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 SMIM9A6NGZ8 99 aa8.92□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 MUC21Q5SSG8 566 aa8.92□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 RASL11AQ6T310 242 aa8.92□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 Q6ZQT7 251 aa8.92□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 ZNF493Q6ZR52 646 aa8.92□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 ZNF575Q86XF7 245 aa8.92□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 CBLN2Q8IUK8 224 aa8.92□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 GTSF1Q8WW33 167 aa8.92□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 BORCS7Q96B45 105 aa8.92□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 TP53TG1Q9Y2A0 90 aa8.92□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 TMSB15BA0A087X1C1 80 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 IGHV3-16A0A0C4DH30 117 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 CBY3A6NI87 242 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 S100A4P26447 101 aaKnown RBP8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 CACNG7P62955 275 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 ZNF415Q09FC8 603 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 ELOBQ15370 118 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 COX19Q49B96 90 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 TMEM88Q6PEY1 159 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 NUP35Q8NFH5 326 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 TMEM263Q8WUH6 116 aaKnown RBP8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 YPEL4Q96NS1 127 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 NDUFAF3Q9BU61 184 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 SCRT2Q9NQ03 307 aa8.91□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 DNAH10Q8IVF4 4471 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 IGHV4-4A0A075B6R2 117 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 A0A1B0GUT8 65 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 S100A8P05109 93 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 FRMD6-AS1P0C7T7 363 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 RNASE3P12724 160 aaKnown RBP8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 TCL1AP56279 114 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 PIK3CD-AS1Q5SR53 167 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 PTH2Q96A98 100 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 C16orf74Q96GX8 76 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 C9orf85Q96MD7 179 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 RCHY1Q96PM5 261 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 URGCP-MRPS24S4R325 110 aa8.9□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 GRIFINA4D1Z8 144 aa8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 H3BVH4 76 aa8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 SCO1O75880 301 aa8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 NXPH4O95158 308 aa8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 ARMS2P0C7Q2 107 aa8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 GZMBP10144 247 aa8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 FAM3BP58499 235 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 RIGQ13278 110 aa8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 RRN3P1Q2M238 152 aa8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 ZFAND6Q6FIF0 208 aa8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 RNASE8Q8TDE3 154 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 RNF183Q96D59 192 aa8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 SPXQ9BT56 116 aa8.89□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 UBR4Q5T4S7 5183 aa8.88□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 GNRH2O43555 120 aa8.88□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 LYZL1Q6UWQ5 148 aa8.88□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 ZFP82Q8N141 532 aa8.88□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 C11orf72Q8NBR9 251 aa8.88□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 PGLYRP4Q96LB8 373 aa8.88□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 PHLDA3Q9Y5J5 127 aa8.88□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 IGHV3OR16-12A0A075B7B8 117 aa8.87□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 A0A1B0GXF2 115 aa8.87□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 MT-ND6P03923 174 aa8.87□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 MIFP14174 115 aa8.87□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 HBBP68871 147 aa8.87□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 DEFB135Q30KP9 77 aa8.87□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 GATD1Q8NB37 220 aa8.87□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 SYT8Q8NBV8 401 aa8.87□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 IL17DQ8TAD2 202 aa8.87□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 FAM210BQ96KR6 192 aa8.87□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 TPPP3Q9BW30 176 aa8.87□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 COLCA2A8K830 154 aa8.86□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 SNURFLB1AK76 121 aa8.86□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 SPRY2O43597 315 aa8.86□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 DAZ2Q13117 558 aaKnown RBP8.86□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 SPANXN1Q5VSR9 72 aa8.86□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 MDFICQ9P1T7 246 aa8.86□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 X6R8D5 127 aa8.86□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 MUC4Q99102 2169 aa8.85□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 TGIF2-C20orf24A0A0A6YYL0 155 aa8.85□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 M0R2P5 195 aa8.85□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 TRGC1P0CF51 173 aa8.85□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 HTN1P15515 57 aa8.85□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 LGALS9BQ3B8N2 356 aa8.85□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 MRPL54Q6P161 138 aaKnown RBP8.85□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 OR10AG1Q8NH19 301 aa8.85□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 GNB1LQ9BYB4 327 aa8.85□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 HLA-DQA1P01909 254 aa8.84□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 NTF3P20783 257 aa8.84□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 TWIST1Q15672 202 aa8.84□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 SMIM15Q7Z3B0 74 aa8.84□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 OR11H2Q8NH07 326 aa8.84□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 AP1S3Q96PC3 154 aa8.84□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 SPATA25Q9BR10 227 aa8.84□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 OVOL2Q9BRP0 275 aa8.84□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 GSN-AS1Q9NRJ2 163 aa8.84□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 TIMM8BQ9Y5J9 83 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-IT3-201ENST00000542680 TEX48A0A1B0GUV7 120 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms