RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 HMGN2P05204 90 aaKnown RBP5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 PATE4P0C8F1 98 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 IL9P15248 144 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 NMSQ5H8A3 153 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 C5orf38Q86SI9 138 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 PFN4Q8NHR9 129 aa5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 SPTBN5Q9NRC6 3674 aaKnown RBP5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 MDC1Q14676 2089 aaKnown RBP5.24□□□□□ -1.57
PDGFRA-206ENST00000508170 A0A087WWC5 75 aa5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 IGHV3-49A0A0A0MS15 119 aa5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 PEBP1P30086 187 aaKnown RBP5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 FXYD6P3P58550 94 aa5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 C16orf47Q6ZP98 133 aaPredicted RBP5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 CCL4L1Q8NHW4 92 aa5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 CHCHD1Q96BP2 118 aaKnown RBP5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 LINC00479Q96M42 142 aa5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 CYTL1Q9NRR1 136 aa5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 LY96Q9Y6Y9 160 aa5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 IGHV3-66A0A0C4DH42 116 aa5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 ATOX1O00244 68 aa5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 IGHV3-30-3P0DP02 117 aa5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 CRIP2P52943 208 aaPredicted RBP5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 FXYD7P58549 80 aa5.23□□□□□ -1.57
PDGFRA-206ENST00000508170 DSCAMO60469 2012 aa5.22□□□□□ -1.57
PDGFRA-206ENST00000508170 BAHCC1Q9P281 2608 aa5.22□□□□□ -1.57
PDGFRA-206ENST00000508170 TRANK1O15050 2925 aa5.22□□□□□ -1.57
PDGFRA-206ENST00000508170 TICRRQ7Z2Z1 1910 aa5.22□□□□□ -1.57
PDGFRA-206ENST00000508170 IGHV3-21A0A0B4J1V1 117 aa5.22□□□□□ -1.57
PDGFRA-206ENST00000508170 SYS1-DBNDD2H3BUS1 97 aa5.22□□□□□ -1.57
PDGFRA-206ENST00000508170 SLC48A1Q6P1K1 146 aa5.22□□□□□ -1.57
PDGFRA-206ENST00000508170 Q6P435 159 aa5.22□□□□□ -1.57
PDGFRA-206ENST00000508170 MYOZ3Q8TDC0 251 aa5.22□□□□□ -1.57
PDGFRA-206ENST00000508170 UPK3BQ9BT76 320 aa5.22□□□□□ -1.57
PDGFRA-206ENST00000508170 IGLV1-50A0A075B6I6 118 aa5.21□□□□□ -1.57
PDGFRA-206ENST00000508170 E7EQL1 145 aa5.21□□□□□ -1.57
PDGFRA-206ENST00000508170 H3BSH0 61 aa5.21□□□□□ -1.57
PDGFRA-206ENST00000508170 ZNF627Q7L945 461 aa5.21□□□□□ -1.57
PDGFRA-206ENST00000508170 C18orf32Q8TCD1 76 aa5.21□□□□□ -1.57
PDGFRA-206ENST00000508170 C1orf147Q96MC9 270 aaPredicted RBP5.21□□□□□ -1.57
PDGFRA-206ENST00000508170 PIEZO1Q92508 2521 aa5.21□□□□□ -1.57
PDGFRA-206ENST00000508170 RAI1Q7Z5J4 1906 aaPredicted RBP5.21□□□□□ -1.58
PDGFRA-206ENST00000508170 IGHV5-10-1A0A0J9YXX1 117 aa5.21□□□□□ -1.58
PDGFRA-206ENST00000508170 A6NED7 52 aa5.21□□□□□ -1.58
PDGFRA-206ENST00000508170 PMS2P5A8MQ11 134 aa5.21□□□□□ -1.58
PDGFRA-206ENST00000508170 STATHP02808 62 aa5.21□□□□□ -1.58
PDGFRA-206ENST00000508170 RBM3P98179 157 aaKnown RBP5.21□□□□□ -1.58
PDGFRA-206ENST00000508170 SDF2L1Q9HCN8 221 aa5.21□□□□□ -1.58
PDGFRA-206ENST00000508170 PRO0461Q9UI25 63 aa5.21□□□□□ -1.58
PDGFRA-206ENST00000508170 MYO9BQ13459 2157 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 MDFIC2A0A1B0GVS7 189 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 ATP5EP56381 51 aaPredicted RBP5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 CCL8P80075 99 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 SSBP1Q04837 148 aaKnown RBP5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 ELOBQ15370 118 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 OR8B3Q8NGG8 313 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 SCN3AQ9NY46 2000 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 A0A087X002 238 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 K7ERS5 55 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 APCSP02743 223 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 SAA1P0DJI8 122 aaPredicted RBP5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 GNB1P62873 340 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 CNEP1R1Q8N9A8 125 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 Q96M85 177 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 CHCHD7Q9BUK0 85 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 PRO3102Q9H379 93 aa5.2□□□□□ -1.58
PDGFRA-206ENST00000508170 ADAMTS20P59510 1910 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 IGHV5-51A0A0C4DH38 117 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 C5orf67F2Z3F1 127 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 SERF1AO75920 110 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 PMCHL1Q16048 86 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 LINC01006Q8NI28 216 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 OR8B2Q96RD0 313 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 MGST2Q99735 147 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 CST11Q9H112 138 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 A8MWP4 228 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 SOCS3O14543 225 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 CCKP06307 115 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 CFC1BP0CG36 223 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 SUPT4H1P63272 117 aaKnown RBP5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 CEND1Q8N111 149 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 TMEM190Q8WZ59 177 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 AQP3Q92482 292 aa5.19□□□□□ -1.58
PDGFRA-206ENST00000508170 UMAD1C9J7I0 102 aa5.18□□□□□ -1.58
PDGFRA-206ENST00000508170 SLC25A16P16260 332 aa5.18□□□□□ -1.58
PDGFRA-206ENST00000508170 TRBV6-7A0A0A0MS04 114 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 A0A1W2PQD3 144 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 C19orf71A6NCJ1 209 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 IGHV1-69P01742 117 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 ZNF816Q0VGE8 651 aaPredicted RBP5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 S100A7L2Q5SY68 101 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 RPL7L1Q6DKI1 246 aaKnown RBP5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 NMES1Q9C002 83 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 TRIOO75962 3097 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 IGHV1-24A0A0C4DH33 117 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 A0A1B0GVX0 72 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 TRGV3P03979 118 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 IGHV1-8P0DP01 117 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 RETNLBQ9BQ08 111 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms