RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 C9orf85Q96MD7 179 aa9.78□□□□□ -0.84
APTX-231ENST00000494973 SSBP4Q9BWG4 385 aaPredicted RBP9.78□□□□□ -0.84
APTX-231ENST00000494973 TIMM8BQ9Y5J9 83 aaPredicted RBP9.78□□□□□ -0.84
APTX-231ENST00000494973 A0A1B0GW15 77 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 LYRM9A8MSI8 78 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 HIGD1CA8MV81 97 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 M0R2P5 195 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 GNRH2O43555 120 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 ARMS2P0C7Q2 107 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 LGALS9BQ3B8N2 356 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 SPANXN1Q5VSR9 72 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 Q8NAQ8 132 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 TPPP3Q9BW30 176 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 CNFNQ9BYD5 112 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 SCRT2Q9NQ03 307 aa9.77□□□□□ -0.85
APTX-231ENST00000494973 IGHV4-28A0A0C4DH34 117 aa9.76□□□□□ -0.85
APTX-231ENST00000494973 RNASE3P12724 160 aaKnown RBP9.76□□□□□ -0.85
APTX-231ENST00000494973 RIGQ13278 110 aa9.76□□□□□ -0.85
APTX-231ENST00000494973 ATP5L2Q7Z4Y8 100 aa9.76□□□□□ -0.85
APTX-231ENST00000494973 IL17DQ8TAD2 202 aa9.76□□□□□ -0.85
APTX-231ENST00000494973 GSN-AS1Q9NRJ2 163 aa9.76□□□□□ -0.85
APTX-231ENST00000494973 SMCO4Q9NRQ5 59 aa9.76□□□□□ -0.85
APTX-231ENST00000494973 A0A1B0GUT8 65 aa9.75□□□□□ -0.85
APTX-231ENST00000494973 GZMBP10144 247 aa9.75□□□□□ -0.85
APTX-231ENST00000494973 AZU1P20160 251 aa9.75□□□□□ -0.85
APTX-231ENST00000494973 SMIM15Q7Z3B0 74 aa9.75□□□□□ -0.85
APTX-231ENST00000494973 GTSF1Q8WW33 167 aa9.75□□□□□ -0.85
APTX-231ENST00000494973 MDFICQ9P1T7 246 aa9.75□□□□□ -0.85
APTX-231ENST00000494973 IGHV4-4A0A075B6R2 117 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 CIDEAO60543 219 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 NXPH4O95158 308 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 TRGC1P0CF51 173 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 SPART-AS1P0CW21 52 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 COX19Q49B96 90 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 RASL11AQ6T310 242 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 LYZL1Q6UWQ5 148 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 NUP35Q8NFH5 326 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 PGLYRP4Q96LB8 373 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 AP1S3Q96PC3 154 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 RETNQ9HD89 108 aa9.74□□□□□ -0.85
APTX-231ENST00000494973 PLAC8L1A1L4L8 177 aa9.73□□□□□ -0.85
APTX-231ENST00000494973 A8MWV9 139 aa9.73□□□□□ -0.85
APTX-231ENST00000494973 SPINK4O60575 86 aa9.73□□□□□ -0.85
APTX-231ENST00000494973 ZNF876PQ49A33 203 aa9.73□□□□□ -0.85
APTX-231ENST00000494973 RASL10AQ92737 203 aa9.73□□□□□ -0.85
APTX-231ENST00000494973 NOP10Q9NPE3 64 aaKnown RBP9.73□□□□□ -0.85
APTX-231ENST00000494973 TRGV1A0A0A0MS02 117 aa9.72□□□□□ -0.85
APTX-231ENST00000494973 M0R381 172 aa9.72□□□□□ -0.85
APTX-231ENST00000494973 EMP1P54849 157 aa9.72□□□□□ -0.85
APTX-231ENST00000494973 ZNF575Q86XF7 245 aa9.72□□□□□ -0.85
APTX-231ENST00000494973 OR10AG1Q8NH19 301 aa9.72□□□□□ -0.85
APTX-231ENST00000494973 C18orf15Q96N68 181 aa9.72□□□□□ -0.85
APTX-231ENST00000494973 RHODO00212 210 aa9.71□□□□□ -0.86
APTX-231ENST00000494973 SMIM17P0DL12 118 aa9.71□□□□□ -0.86
APTX-231ENST00000494973 HBBP68871 147 aa9.71□□□□□ -0.86
APTX-231ENST00000494973 TWIST1Q15672 202 aa9.71□□□□□ -0.86
APTX-231ENST00000494973 ATRAIDQ6UW56 229 aa9.71□□□□□ -0.86
APTX-231ENST00000494973 DKK2Q9UBU2 259 aa9.71□□□□□ -0.86
APTX-231ENST00000494973 TRGV2A0A075B6R0 118 aa9.7□□□□□ -0.86
APTX-231ENST00000494973 PRM2P04554 102 aa9.7□□□□□ -0.86
APTX-231ENST00000494973 FAM3BP58499 235 aaPredicted RBP9.7□□□□□ -0.86
APTX-231ENST00000494973 FAM222AQ5U5X8 452 aa9.7□□□□□ -0.86
APTX-231ENST00000494973 LINC00612Q8N6U2 182 aa9.7□□□□□ -0.86
APTX-231ENST00000494973 TRBV24-1A0A075B6N3 115 aa9.69□□□□□ -0.86
APTX-231ENST00000494973 NTF3P20783 257 aa9.69□□□□□ -0.86
APTX-231ENST00000494973 DAD1P61803 113 aa9.69□□□□□ -0.86
APTX-231ENST00000494973 MRPL16Q9NX20 251 aaKnown RBP9.69□□□□□ -0.86
APTX-231ENST00000494973 URGCP-MRPS24S4R325 110 aa9.69□□□□□ -0.86
APTX-231ENST00000494973 TRAV4A0A0B4J268 109 aa9.68□□□□□ -0.86
APTX-231ENST00000494973 A0A0J9YWU9 116 aa9.68□□□□□ -0.86
APTX-231ENST00000494973 MT-ND6P03923 174 aa9.68□□□□□ -0.86
APTX-231ENST00000494973 ELOBQ15370 118 aa9.68□□□□□ -0.86
APTX-231ENST00000494973 DMRTA1Q5VZB9 504 aa9.68□□□□□ -0.86
APTX-231ENST00000494973 MRPL54Q6P161 138 aaKnown RBP9.68□□□□□ -0.86
APTX-231ENST00000494973 ZFP2Q6ZN57 461 aa9.68□□□□□ -0.86
APTX-231ENST00000494973 Q6ZTI0 123 aa9.68□□□□□ -0.86
APTX-231ENST00000494973 FRZBQ92765 325 aa9.68□□□□□ -0.86
APTX-231ENST00000494973 DPH3P1Q9H4G8 78 aa9.68□□□□□ -0.86
APTX-231ENST00000494973 U3KQK5 164 aa9.68□□□□□ -0.86
APTX-231ENST00000494973 MEGF8Q7Z7M0 2845 aa9.68□□□□□ -0.86
APTX-231ENST00000494973 A0A1B0GXF2 115 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 GAGE12BA1L429 117 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 DEFB4AO15263 64 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 RS1O15537 224 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 GAGE7O76087 117 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 GAGE12FP0CL80 117 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 GAGE12GP0CL81 117 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 GAGE12IP0CL82 117 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 TMEM88Q6PEY1 159 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 CBLN2Q8IUK8 224 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 OR4C5Q8NGB2 326 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 C11orf45Q8TAV5 145 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 TMEM191AQ9H0A3 160 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 NBEAL2Q6ZNJ1 2754 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 MUC4Q99102 2169 aa9.67□□□□□ -0.86
APTX-231ENST00000494973 MUC21A0A0G2JKD1 596 aa9.66□□□□□ -0.86
APTX-231ENST00000494973 MUC21A0A140T8X8 626 aa9.66□□□□□ -0.86
APTX-231ENST00000494973 HLA-DQA1P01909 254 aa9.66□□□□□ -0.86
APTX-231ENST00000494973 ATP5G1P05496 136 aa9.66□□□□□ -0.86
APTX-231ENST00000494973 DEFB130BP0DP73 79 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms