RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 TP53TG3Q9ULZ0 132 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 PHLDA3Q9Y5J5 127 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 URGCP-MRPS24S4R325 110 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 MEGF8Q7Z7M0 2845 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 A0A1B0GUT8 65 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 A0A1B0GW15 77 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 H3BVH4 76 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 GNRH2O43555 120 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 SPRY2O43597 315 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 SNAI2O43623 268 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 PRB2P02812 416 aaPredicted RBP7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 S100A8P05109 93 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 ARMS2P0C7Q2 107 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 CACNG7P62955 275 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 WDR73Q6P4I2 378 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 CBLN2Q8IUK8 224 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 NUP35Q8NFH5 326 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 PGLYRP4Q96LB8 373 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 SPXQ9BT56 116 aa7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 SSBP4Q9BWG4 385 aaPredicted RBP7.66□□□□□ -1.18
HLA-DMB-261ENST00000487996 SNURFLB1AK76 121 aa7.65□□□□□ -1.18
HLA-DMB-261ENST00000487996 MIFP14174 115 aa7.65□□□□□ -1.18
HLA-DMB-261ENST00000487996 FAM3BP58499 235 aaPredicted RBP7.65□□□□□ -1.18
HLA-DMB-261ENST00000487996 RIGQ13278 110 aa7.65□□□□□ -1.18
HLA-DMB-261ENST00000487996 SPANXN1Q5VSR9 72 aa7.65□□□□□ -1.18
HLA-DMB-261ENST00000487996 RASL11AQ6T310 242 aa7.65□□□□□ -1.18
HLA-DMB-261ENST00000487996 LYZL1Q6UWQ5 148 aa7.65□□□□□ -1.18
HLA-DMB-261ENST00000487996 SYT8Q8NBV8 401 aa7.65□□□□□ -1.18
HLA-DMB-261ENST00000487996 RNASE8Q8TDE3 154 aaKnown RBP7.65□□□□□ -1.18
HLA-DMB-261ENST00000487996 CNFNQ9BYD5 112 aa7.65□□□□□ -1.18
HLA-DMB-261ENST00000487996 TRBV24-1A0A075B6N3 115 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 RNASE3P12724 160 aaKnown RBP7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 ELOBQ15370 118 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 COX19Q49B96 90 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 ZNF575Q86XF7 245 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 ZFP82Q8N141 532 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 OR11H2Q8NH07 326 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 MRAPQ8TCY5 172 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 C9orf85Q96MD7 179 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 NDUFAF3Q9BU61 184 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 SCRT2Q9NQ03 307 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 TIMM8BQ9Y5J9 83 aaPredicted RBP7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 PRSS47A8MTI9 375 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 SCO1O75880 301 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 PIK3CD-AS1Q5SR53 167 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 C11orf72Q8NBR9 251 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 SPATA25Q9BR10 227 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 MDFICQ9P1T7 246 aa7.64□□□□□ -1.19
HLA-DMB-261ENST00000487996 IGHV4-4A0A075B6R2 117 aa7.63□□□□□ -1.19
HLA-DMB-261ENST00000487996 M0R2P5 195 aa7.63□□□□□ -1.19
HLA-DMB-261ENST00000487996 HBBP68871 147 aa7.63□□□□□ -1.19
HLA-DMB-261ENST00000487996 DAZ2Q13117 558 aaKnown RBP7.63□□□□□ -1.19
HLA-DMB-261ENST00000487996 SMIM15Q7Z3B0 74 aa7.63□□□□□ -1.19
HLA-DMB-261ENST00000487996 PTH2Q96A98 100 aa7.63□□□□□ -1.19
HLA-DMB-261ENST00000487996 GSN-AS1Q9NRJ2 163 aa7.63□□□□□ -1.19
HLA-DMB-261ENST00000487996 X6R8D5 127 aa7.63□□□□□ -1.19
HLA-DMB-261ENST00000487996 TRGC1P0CF51 173 aa7.62□□□□□ -1.19
HLA-DMB-261ENST00000487996 AZU1P20160 251 aa7.62□□□□□ -1.19
HLA-DMB-261ENST00000487996 DEFA6Q01524 100 aa7.62□□□□□ -1.19
HLA-DMB-261ENST00000487996 TWIST1Q15672 202 aa7.62□□□□□ -1.19
HLA-DMB-261ENST00000487996 LGALS9BQ3B8N2 356 aa7.62□□□□□ -1.19
HLA-DMB-261ENST00000487996 OR10AG1Q8NH19 301 aa7.62□□□□□ -1.19
HLA-DMB-261ENST00000487996 FAM210BQ96KR6 192 aa7.62□□□□□ -1.19
HLA-DMB-261ENST00000487996 OVOL2Q9BRP0 275 aa7.62□□□□□ -1.19
HLA-DMB-261ENST00000487996 NBEAL2Q6ZNJ1 2754 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 TEX48A0A1B0GUV7 120 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 PCP4L1A6NKN8 68 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 M0R381 172 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 SPINK4O60575 86 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 NXPH4O95158 308 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 NTF3P20783 257 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 ZNF876PQ49A33 203 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 MRPL54Q6P161 138 aaKnown RBP7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 SBSPONQ8IVN8 264 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 LINC00518Q8N0U6 118 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 IL17DQ8TAD2 202 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 YPEL4Q96NS1 127 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 AP1S3Q96PC3 154 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 ZMAT4Q9H898 229 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 TGIF2-C20orf24A0A0A6YYL0 155 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 MT-ND6P03923 174 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 B9D2Q9BPU9 175 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 TM2D3Q9BRN9 247 aa7.61□□□□□ -1.19
HLA-DMB-261ENST00000487996 MUC4Q99102 2169 aa7.6□□□□□ -1.19
HLA-DMB-261ENST00000487996 A0A1B0GXF2 115 aa7.6□□□□□ -1.19
HLA-DMB-261ENST00000487996 PRM2P04554 102 aa7.6□□□□□ -1.19
HLA-DMB-261ENST00000487996 SMIM17P0DL12 118 aa7.6□□□□□ -1.19
HLA-DMB-261ENST00000487996 CAMPP49913 170 aa7.6□□□□□ -1.19
HLA-DMB-261ENST00000487996 Q8NAQ8 132 aa7.6□□□□□ -1.19
HLA-DMB-261ENST00000487996 RASL10AQ92737 203 aa7.6□□□□□ -1.19
HLA-DMB-261ENST00000487996 NOP10Q9NPE3 64 aaKnown RBP7.6□□□□□ -1.19
HLA-DMB-261ENST00000487996 IGHV4-28A0A0C4DH34 117 aa7.59□□□□□ -1.19
HLA-DMB-261ENST00000487996 MUC21A0A0G2JKD1 596 aa7.59□□□□□ -1.19
HLA-DMB-261ENST00000487996 MUC21A0A140T8X8 626 aa7.59□□□□□ -1.19
HLA-DMB-261ENST00000487996 LYRM9A8MSI8 78 aa7.59□□□□□ -1.19
HLA-DMB-261ENST00000487996 A8MWV9 139 aa7.59□□□□□ -1.19
HLA-DMB-261ENST00000487996 HLA-DQA1P01909 254 aa7.59□□□□□ -1.19
HLA-DMB-261ENST00000487996 RAB4BP61018 213 aa7.59□□□□□ -1.19
HLA-DMB-261ENST00000487996 GNB1LQ9BYB4 327 aa7.59□□□□□ -1.19
HLA-DMB-261ENST00000487996 TRGV1A0A0A0MS02 117 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms