RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 TAS2R8Q9NYW2 309 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 CASZ1Q86V15 1759 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 APCP25054 2843 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 NAV3Q8IVL0 2385 aa0.23□□□□□ -2.37
COPS3-206ENST00000471414 UHRF1BP1LA0JNW5 1464 aa0.22□□□□□ -2.37
COPS3-206ENST00000471414 ANKRD30AQ9BXX3 1397 aa0.22□□□□□ -2.37
COPS3-206ENST00000471414 CCDC171Q6TFL3 1326 aa0.22□□□□□ -2.37
COPS3-206ENST00000471414 ZNF142P52746 1687 aaPredicted RBP0.22□□□□□ -2.37
COPS3-206ENST00000471414 A0A096LNT2 108 aa0.22□□□□□ -2.37
COPS3-206ENST00000471414 TEX49A0A1B0GTD5 131 aa0.22□□□□□ -2.37
COPS3-206ENST00000471414 CXorf51AA0A1B0GTR3 108 aa0.22□□□□□ -2.37
COPS3-206ENST00000471414 APOC1P02654 83 aa0.22□□□□□ -2.37
COPS3-206ENST00000471414 DBIP07108 87 aaKnown RBP0.22□□□□□ -2.37
COPS3-206ENST00000471414 AKAP14Q86UN6 197 aa0.22□□□□□ -2.37
COPS3-206ENST00000471414 AIF1LQ9BQI0 150 aa0.22□□□□□ -2.37
COPS3-206ENST00000471414 VPS25Q9BRG1 176 aa0.22□□□□□ -2.37
COPS3-206ENST00000471414 YPEL1O60688 119 aa0.21□□□□□ -2.38
COPS3-206ENST00000471414 RBP4P02753 201 aa0.21□□□□□ -2.38
COPS3-206ENST00000471414 MPC1LP0DKB6 136 aa0.21□□□□□ -2.38
COPS3-206ENST00000471414 SCGB1A1P11684 91 aa0.21□□□□□ -2.38
COPS3-206ENST00000471414 MORN2Q502X0 79 aa0.21□□□□□ -2.38
COPS3-206ENST00000471414 SNX29P2Q8IUI4 249 aa0.21□□□□□ -2.38
COPS3-206ENST00000471414 ATP6V0E2Q8NHE4 81 aa0.21□□□□□ -2.38
COPS3-206ENST00000471414 PYDC1Q8WXC3 89 aa0.21□□□□□ -2.38
COPS3-206ENST00000471414 KIF13AQ9H1H9 1805 aa0.21□□□□□ -2.38
COPS3-206ENST00000471414 MEGF8Q7Z7M0 2845 aa0.21□□□□□ -2.38
COPS3-206ENST00000471414 VIRMAQ69YN4 1812 aaKnown RBP0.2□□□□□ -2.38
COPS3-206ENST00000471414 PYYP10082 97 aa0.2□□□□□ -2.38
COPS3-206ENST00000471414 CLLU1Q5K131 121 aa0.2□□□□□ -2.38
COPS3-206ENST00000471414 SPINK6Q6UWN8 80 aa0.2□□□□□ -2.38
COPS3-206ENST00000471414 DYNLRB2Q8TF09 96 aa0.2□□□□□ -2.38
COPS3-206ENST00000471414 PPP1R1CQ8WVI7 109 aa0.2□□□□□ -2.38
COPS3-206ENST00000471414 TMEM141Q96I45 108 aa0.2□□□□□ -2.38
COPS3-206ENST00000471414 DSCR8Q96T75 97 aa0.2□□□□□ -2.38
COPS3-206ENST00000471414 COA4Q9NYJ1 87 aa0.2□□□□□ -2.38
COPS3-206ENST00000471414 NOP16Q9Y3C1 178 aaKnown RBP0.2□□□□□ -2.38
COPS3-206ENST00000471414 CDK5RAP2Q96SN8 1893 aa0.2□□□□□ -2.38
COPS3-206ENST00000471414 TNS1Q9HBL0 1735 aaKnown RBP0.19□□□□□ -2.38
COPS3-206ENST00000471414 MYH13Q9UKX3 1938 aa0.19□□□□□ -2.38
COPS3-206ENST00000471414 TRAV12-2A0A075B6T6 113 aa0.19□□□□□ -2.38
COPS3-206ENST00000471414 MCRIP1C9JLW8 97 aa0.19□□□□□ -2.38
COPS3-206ENST00000471414 TFF1P04155 84 aa0.19□□□□□ -2.38
COPS3-206ENST00000471414 SLC25A6P12236 298 aa0.19□□□□□ -2.38
COPS3-206ENST00000471414 ATP11AUNQ6ZP68 121 aa0.19□□□□□ -2.38
COPS3-206ENST00000471414 BET1LQ9NYM9 111 aa0.19□□□□□ -2.38
COPS3-206ENST00000471414 LSM2Q9Y333 95 aaKnown RBP0.19□□□□□ -2.38
COPS3-206ENST00000471414 KDM6BO15054 1643 aa0.19□□□□□ -2.38
COPS3-206ENST00000471414 PLXNA1Q9UIW2 1896 aa0.18□□□□□ -2.38
COPS3-206ENST00000471414 SPAG17Q6Q759 2223 aa0.18□□□□□ -2.38
COPS3-206ENST00000471414 PTPRMP28827 1452 aa0.18□□□□□ -2.38
COPS3-206ENST00000471414 CACNA1EQ15878 2313 aa0.18□□□□□ -2.38
COPS3-206ENST00000471414 ZNF670-ZNF695F2Z2N8 137 aa0.18□□□□□ -2.38
COPS3-206ENST00000471414 J3QLW9 94 aa0.18□□□□□ -2.38
COPS3-206ENST00000471414 M0R2P5 195 aa0.18□□□□□ -2.38
COPS3-206ENST00000471414 OR2T2Q6IF00 324 aa0.18□□□□□ -2.38
COPS3-206ENST00000471414 NDUFA11Q86Y39 141 aa0.18□□□□□ -2.38
COPS3-206ENST00000471414 SYNJ1O43426 1573 aa0.18□□□□□ -2.38
COPS3-206ENST00000471414 SYNE1Q8NF91 8797 aaKnown RBP0.17□□□□□ -2.38
COPS3-206ENST00000471414 OVOS2A0A0J9YW53 1432 aa0.17□□□□□ -2.38
COPS3-206ENST00000471414 TCRBV3S1A0A5B6 114 aa0.17□□□□□ -2.38
COPS3-206ENST00000471414 ELOF1P60002 83 aaKnown RBP0.17□□□□□ -2.38
COPS3-206ENST00000471414 EMX2Q04743 252 aa0.17□□□□□ -2.38
COPS3-206ENST00000471414 OVOS2Q6IE36 1432 aa0.17□□□□□ -2.38
COPS3-206ENST00000471414 MMGT1Q8N4V1 131 aa0.17□□□□□ -2.38
COPS3-206ENST00000471414 PROK2Q9HC23 129 aa0.17□□□□□ -2.38
COPS3-206ENST00000471414 ERG28Q9UKR5 140 aa0.17□□□□□ -2.38
COPS3-206ENST00000471414 ERCC6Q03468 1493 aa0.16□□□□□ -2.38
COPS3-206ENST00000471414 TRBV20-1A0A075B6N2 111 aa0.16□□□□□ -2.38
COPS3-206ENST00000471414 CCDC179H3BU77 68 aa0.16□□□□□ -2.38
COPS3-206ENST00000471414 NCS1P62166 190 aa0.16□□□□□ -2.38
COPS3-206ENST00000471414 CYP2G1PQ6ZSU1 146 aa0.16□□□□□ -2.38
COPS3-206ENST00000471414 VMO1Q7Z5L0 202 aa0.16□□□□□ -2.38
COPS3-206ENST00000471414 IFI27L1Q96BM0 104 aa0.16□□□□□ -2.38
COPS3-206ENST00000471414 NAV2Q8IVL1 2488 aa0.16□□□□□ -2.38
COPS3-206ENST00000471414 ARHGEF10O15013 1369 aa0.16□□□□□ -2.38
COPS3-206ENST00000471414 ABCA1O95477 2261 aa0.16□□□□□ -2.38
COPS3-206ENST00000471414 MYH6P13533 1939 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 ABCA4P78363 2273 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 RBAKDNA6NC62 111 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 F2Z2F3 143 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 ARPC5O15511 151 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 CKS1BP61024 79 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 HIST1H1AQ02539 215 aaPredicted RBP0.15□□□□□ -2.39
COPS3-206ENST00000471414 PRR15LQ9BU68 103 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 BATF3Q9NR55 127 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 CEP152O94986 1710 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 NRXN2Q9P2S2 1712 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 PARP14Q460N5 1801 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 PHIPQ8WWQ0 1821 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 MAST4O15021 2626 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 LAMC3Q9Y6N6 1575 aa0.15□□□□□ -2.39
COPS3-206ENST00000471414 LAMB1P07942 1786 aa0.14□□□□□ -2.39
COPS3-206ENST00000471414 DISP2A7MBM2 1401 aa0.14□□□□□ -2.39
COPS3-206ENST00000471414 CDK13Q14004 1512 aaKnown RBP0.14□□□□□ -2.39
COPS3-206ENST00000471414 FAT4Q6V0I7 4981 aa0.14□□□□□ -2.39
COPS3-206ENST00000471414 IGLC6P0CF74 106 aa0.14□□□□□ -2.39
COPS3-206ENST00000471414 CCL3L1P16619 93 aa0.14□□□□□ -2.39
COPS3-206ENST00000471414 NPC2P61916 151 aa0.14□□□□□ -2.39
COPS3-206ENST00000471414 BPESC1Q9GZL8 116 aa0.14□□□□□ -2.39
COPS3-206ENST00000471414 SAR1AQ9NR31 198 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms