RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 PYYP10082 97 aa0.25□□□□□ -2.37
LINC00397-201ENST00000422074 HLA-DRB4P13762 266 aa0.25□□□□□ -2.37
LINC00397-201ENST00000422074 TMEM244Q5VVB8 128 aa0.25□□□□□ -2.37
LINC00397-201ENST00000422074 PRR15LQ9BU68 103 aa0.25□□□□□ -2.37
LINC00397-201ENST00000422074 BET1LQ9NYM9 111 aa0.25□□□□□ -2.37
LINC00397-201ENST00000422074 HLA-DRB4X5D2U9 266 aa0.25□□□□□ -2.37
LINC00397-201ENST00000422074 NAV2Q8IVL1 2488 aa0.25□□□□□ -2.37
LINC00397-201ENST00000422074 TNCP24821 2201 aa0.25□□□□□ -2.37
LINC00397-201ENST00000422074 HELZP42694 1942 aaKnown RBP0.25□□□□□ -2.37
LINC00397-201ENST00000422074 A0A096LNT2 108 aa0.24□□□□□ -2.37
LINC00397-201ENST00000422074 TNFSF15O95150 251 aa0.24□□□□□ -2.37
LINC00397-201ENST00000422074 SCTP09683 121 aa0.24□□□□□ -2.37
LINC00397-201ENST00000422074 CLLU1Q5K131 121 aa0.24□□□□□ -2.37
LINC00397-201ENST00000422074 CYP2G1PQ6ZSU1 146 aa0.24□□□□□ -2.37
LINC00397-201ENST00000422074 VMO1Q7Z5L0 202 aa0.24□□□□□ -2.37
LINC00397-201ENST00000422074 DYNLRB2Q8TF09 96 aa0.24□□□□□ -2.37
LINC00397-201ENST00000422074 AIF1LQ9BQI0 150 aa0.24□□□□□ -2.37
LINC00397-201ENST00000422074 PROK2Q9HC23 129 aa0.24□□□□□ -2.37
LINC00397-201ENST00000422074 HIGD1AQ9Y241 93 aa0.24□□□□□ -2.37
LINC00397-201ENST00000422074 MAP2P11137 1827 aaKnown RBP0.24□□□□□ -2.37
LINC00397-201ENST00000422074 MEGF8Q7Z7M0 2845 aa0.23□□□□□ -2.37
LINC00397-201ENST00000422074 CACNA1EQ15878 2313 aa0.23□□□□□ -2.37
LINC00397-201ENST00000422074 DBIP07108 87 aaKnown RBP0.23□□□□□ -2.37
LINC00397-201ENST00000422074 ATP6V0E2Q8NHE4 81 aa0.23□□□□□ -2.37
LINC00397-201ENST00000422074 DNAJC15Q9Y5T4 150 aa0.23□□□□□ -2.37
LINC00397-201ENST00000422074 TNS1Q9HBL0 1735 aaKnown RBP0.23□□□□□ -2.37
LINC00397-201ENST00000422074 UHRF1BP1LA0JNW5 1464 aa0.22□□□□□ -2.37
LINC00397-201ENST00000422074 J3QLW9 94 aa0.22□□□□□ -2.37
LINC00397-201ENST00000422074 NBEAP1P0C6P0 100 aa0.22□□□□□ -2.37
LINC00397-201ENST00000422074 TAC4Q86UU9 113 aa0.22□□□□□ -2.37
LINC00397-201ENST00000422074 TANC1Q9C0D5 1861 aa0.22□□□□□ -2.37
LINC00397-201ENST00000422074 ZNF142P52746 1687 aaPredicted RBP0.21□□□□□ -2.38
LINC00397-201ENST00000422074 PLXNA2O75051 1894 aa0.21□□□□□ -2.38
LINC00397-201ENST00000422074 LAMC3Q9Y6N6 1575 aa0.21□□□□□ -2.38
LINC00397-201ENST00000422074 CXorf51AA0A1B0GTR3 108 aa0.21□□□□□ -2.38
LINC00397-201ENST00000422074 B2MP61769 119 aa0.21□□□□□ -2.38
LINC00397-201ENST00000422074 BPESC1Q9GZL8 116 aa0.21□□□□□ -2.38
LINC00397-201ENST00000422074 ERG28Q9UKR5 140 aa0.21□□□□□ -2.38
LINC00397-201ENST00000422074 ARAP1Q96P48 1450 aa0.21□□□□□ -2.38
LINC00397-201ENST00000422074 RBAKDNA6NC62 111 aa0.2□□□□□ -2.38
LINC00397-201ENST00000422074 NDUFA11Q86Y39 141 aa0.2□□□□□ -2.38
LINC00397-201ENST00000422074 UNC13BO14795 1591 aa0.19□□□□□ -2.38
LINC00397-201ENST00000422074 NINQ8N4C6 2090 aa0.19□□□□□ -2.38
LINC00397-201ENST00000422074 SLC25A6P12236 298 aa0.19□□□□□ -2.38
LINC00397-201ENST00000422074 COX4I1P13073 169 aa0.19□□□□□ -2.38
LINC00397-201ENST00000422074 NCS1P62166 190 aa0.19□□□□□ -2.38
LINC00397-201ENST00000422074 KNTC1P50748 2209 aa0.19□□□□□ -2.38
LINC00397-201ENST00000422074 CASZ1Q86V15 1759 aa0.19□□□□□ -2.38
LINC00397-201ENST00000422074 ESPL1Q14674 2120 aa0.19□□□□□ -2.38
LINC00397-201ENST00000422074 CDK13Q14004 1512 aaKnown RBP0.18□□□□□ -2.38
LINC00397-201ENST00000422074 CCDC179H3BU77 68 aa0.18□□□□□ -2.38
LINC00397-201ENST00000422074 SPINK1P00995 79 aa0.18□□□□□ -2.38
LINC00397-201ENST00000422074 ELOF1P60002 83 aaKnown RBP0.18□□□□□ -2.38
LINC00397-201ENST00000422074 FAM74A4Q5TZK3 123 aa0.18□□□□□ -2.38
LINC00397-201ENST00000422074 OR2T2Q6IF00 324 aa0.18□□□□□ -2.38
LINC00397-201ENST00000422074 ATP11AUNQ6ZP68 121 aa0.18□□□□□ -2.38
LINC00397-201ENST00000422074 MMGT1Q8N4V1 131 aa0.18□□□□□ -2.38
LINC00397-201ENST00000422074 PYDC1Q8WXC3 89 aa0.18□□□□□ -2.38
LINC00397-201ENST00000422074 IFI27L1Q96BM0 104 aa0.18□□□□□ -2.38
LINC00397-201ENST00000422074 SOGA1O94964 1423 aa0.18□□□□□ -2.38
LINC00397-201ENST00000422074 ANKRD30AQ9BXX3 1397 aa0.18□□□□□ -2.38
LINC00397-201ENST00000422074 SCGB1A1P11684 91 aa0.17□□□□□ -2.38
LINC00397-201ENST00000422074 PTPRZ1P23471 2315 aaPredicted RBP0.17□□□□□ -2.38
LINC00397-201ENST00000422074 DR1Q01658 176 aa0.17□□□□□ -2.38
LINC00397-201ENST00000422074 COX6A2Q02221 97 aa0.17□□□□□ -2.38
LINC00397-201ENST00000422074 EMX2Q04743 252 aa0.17□□□□□ -2.38
LINC00397-201ENST00000422074 AKAP14Q86UN6 197 aa0.17□□□□□ -2.38
LINC00397-201ENST00000422074 SMIM11BQ8TCY0 68 aa0.17□□□□□ -2.38
LINC00397-201ENST00000422074 LSM2Q9Y333 95 aaKnown RBP0.17□□□□□ -2.38
LINC00397-201ENST00000422074 PTPRMP28827 1452 aa0.16□□□□□ -2.38
LINC00397-201ENST00000422074 ERCC6Q03468 1493 aa0.16□□□□□ -2.38
LINC00397-201ENST00000422074 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
LINC00397-201ENST00000422074 KIF13AQ9H1H9 1805 aa0.16□□□□□ -2.38
LINC00397-201ENST00000422074 M0R2P5 195 aa0.16□□□□□ -2.38
LINC00397-201ENST00000422074 APODP05090 189 aa0.16□□□□□ -2.38
LINC00397-201ENST00000422074 MORN2Q502X0 79 aa0.16□□□□□ -2.38
LINC00397-201ENST00000422074 Q5BKY6 102 aa0.16□□□□□ -2.38
LINC00397-201ENST00000422074 SLC48A1Q6P1K1 146 aa0.16□□□□□ -2.38
LINC00397-201ENST00000422074 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.16□□□□□ -2.38
LINC00397-201ENST00000422074 C4orf33Q8N1A6 199 aa0.16□□□□□ -2.38
LINC00397-201ENST00000422074 SYNJ1O43426 1573 aa0.15□□□□□ -2.38
LINC00397-201ENST00000422074 SYNE2Q8WXH0 6885 aaKnown RBP0.15□□□□□ -2.39
LINC00397-201ENST00000422074 CCL3L1P16619 93 aa0.15□□□□□ -2.39
LINC00397-201ENST00000422074 SSBP1Q04837 148 aaKnown RBP0.15□□□□□ -2.39
LINC00397-201ENST00000422074 CTAGE3PQ8IX95 158 aa0.15□□□□□ -2.39
LINC00397-201ENST00000422074 FAM213BQ8TBF2 198 aa0.15□□□□□ -2.39
LINC00397-201ENST00000422074 LZICQ8WZA0 190 aa0.15□□□□□ -2.39
LINC00397-201ENST00000422074 TMEM242Q9NWH2 141 aa0.15□□□□□ -2.39
LINC00397-201ENST00000422074 VIRMAQ69YN4 1812 aaKnown RBP0.15□□□□□ -2.39
LINC00397-201ENST00000422074 OVOS2A0A0J9YW53 1432 aa0.14□□□□□ -2.39
LINC00397-201ENST00000422074 OVOS2Q6IE36 1432 aa0.14□□□□□ -2.39
LINC00397-201ENST00000422074 TRAV12-3A0A0B4J271 114 aa0.14□□□□□ -2.39
LINC00397-201ENST00000422074 SPCS2Q15005 226 aa0.14□□□□□ -2.39
LINC00397-201ENST00000422074 C20orf197Q8N268 126 aa0.14□□□□□ -2.39
LINC00397-201ENST00000422074 V9GYV3 84 aa0.14□□□□□ -2.39
LINC00397-201ENST00000422074 IGF2RP11717 2491 aa0.14□□□□□ -2.39
LINC00397-201ENST00000422074 IGSF10Q6WRI0 2623 aa0.13□□□□□ -2.39
LINC00397-201ENST00000422074 TRBV20-1A0A075B6N2 111 aa0.13□□□□□ -2.39
LINC00397-201ENST00000422074 TRBV7-1A0A0A6YYK4 115 aa0.13□□□□□ -2.39
LINC00397-201ENST00000422074 J3QR89 54 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms